Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000287A_C01 KCC000287A_c01
(548 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_186797.1| thylakoid lumen rotamase [Arabidopsis thaliana]... 84 1e-15
sp|O49939|TL40_SPIOL Peptidyl-prolyl cis-trans isomerase, chloro... 81 8e-15
pir||T06363 hypothetical protein precursor - garden pea gi|26232... 79 5e-14
gb|AAP79162.1| thylakoid lumen protease [Bigelowiella natans] 77 1e-13
ref|NP_681610.1| peptidyl-prolyl cis-trans isomerase [Thermosyne... 74 1e-12
>ref|NP_186797.1| thylakoid lumen rotamase [Arabidopsis thaliana]
gi|6016707|gb|AAF01533.1|AC009325_3 putative thylakoid
lumen rotamase [Arabidopsis thaliana]
gi|14532438|gb|AAK63947.1| AT3g01480/F4P13_3
[Arabidopsis thaliana] gi|21360549|gb|AAM47471.1|
AT3g01480/F4P13_3 [Arabidopsis thaliana]
gi|21593368|gb|AAM65317.1| putative thylakoid lumen
rotamase [Arabidopsis thaliana]
Length = 437
Score = 84.0 bits (206), Expect = 1e-15
Identities = 40/59 (67%), Positives = 48/59 (80%)
Frame = +1
Query: 1 QVFFLLKESELTPTGSNLLDGRFAVFGYITQGQDALADFRVGDKIEYIKFVDGKENLKN 177
QVF+LLKESELTP+ SN+LDGR+AVFGY+T +D LAD +VGD IE I+ V G ENL N
Sbjct: 372 QVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLADLKVGDVIESIQVVSGLENLAN 430
>sp|O49939|TL40_SPIOL Peptidyl-prolyl cis-trans isomerase, chloroplast precursor (40 kDa
thylakoid lumen PPIase) (40 kDa thylakoid lumen
rotamase) gi|7484684|pir||T09212 rotamase tlr40
precursor, thylakoid lumen - spinach
gi|2864602|emb|CAA72792.1| thylakoid lumen rotamase
[Spinacia oleracea]
Length = 449
Score = 81.3 bits (199), Expect = 8e-15
Identities = 37/59 (62%), Positives = 48/59 (80%)
Frame = +1
Query: 1 QVFFLLKESELTPTGSNLLDGRFAVFGYITQGQDALADFRVGDKIEYIKFVDGKENLKN 177
Q+F+LLKESELTP+ +N+LDGR+AVFGY+T QD LAD +VGD IE ++ V G +NL N
Sbjct: 384 QIFWLLKESELTPSNANILDGRYAVFGYVTDNQDYLADLKVGDVIESVQAVSGVDNLVN 442
>pir||T06363 hypothetical protein precursor - garden pea
gi|2623246|gb|AAC50041.1| poly(A) polymerase [Pisum
sativum]
Length = 454
Score = 78.6 bits (192), Expect = 5e-14
Identities = 37/59 (62%), Positives = 47/59 (78%)
Frame = +1
Query: 1 QVFFLLKESELTPTGSNLLDGRFAVFGYITQGQDALADFRVGDKIEYIKFVDGKENLKN 177
QVF+LLKESELTP+ +N+L GR+AVFGY+T+ +D LAD +VGD IE I+ V G NL N
Sbjct: 389 QVFWLLKESELTPSNANILHGRYAVFGYVTENEDFLADLKVGDVIESIQVVSGLHNLVN 447
>gb|AAP79162.1| thylakoid lumen protease [Bigelowiella natans]
Length = 226
Score = 77.4 bits (189), Expect = 1e-13
Identities = 33/58 (56%), Positives = 47/58 (80%)
Frame = +1
Query: 1 QVFFLLKESELTPTGSNLLDGRFAVFGYITQGQDALADFRVGDKIEYIKFVDGKENLK 174
Q+F+LLK++++TP+G+N+LDGRFAVFGY T+ DAL + RVGDKIE ++ G E+ K
Sbjct: 165 QIFWLLKDNDMTPSGTNVLDGRFAVFGYTTKNNDALRELRVGDKIESVRITSGLEHFK 222
>ref|NP_681610.1| peptidyl-prolyl cis-trans isomerase [Thermosynechococcus elongatus
BP-1] gi|22294542|dbj|BAC08372.1| peptidyl-prolyl
cis-trans isomerase [Thermosynechococcus elongatus BP-1]
Length = 392
Score = 73.9 bits (180), Expect = 1e-12
Identities = 36/57 (63%), Positives = 41/57 (71%)
Frame = +1
Query: 1 QVFFLLKESELTPTGSNLLDGRFAVFGYITQGQDALADFRVGDKIEYIKFVDGKENL 171
Q FFLL E ELTP G NLLDGR+AVFGY+ +G++ L R GDKI K VDG ENL
Sbjct: 332 QFFFLLFEPELTPAGLNLLDGRYAVFGYVVEGEETLRQLRQGDKILSAKVVDGLENL 388
