Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000261A_C01 KCC000261A_c01
(567 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T09159 RNA helicase prh75 - spinach gi|1488647|emb|CAA68193... 88 9e-17
ref|NP_201025.1| DEAD box RNA helicase (prh75), putative [Arabid... 82 7e-15
emb|CAA68194.1| RNA helicase [Arabidopsis thaliana] 82 7e-15
gb|AAK62631.1| AT5g62190/mmi9_10 [Arabidopsis thaliana] 80 3e-14
gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata] 79 4e-14
>pir||T09159 RNA helicase prh75 - spinach gi|1488647|emb|CAA68193.1| RNA
helicase [Spinacia oleracea]
Length = 685
Score = 87.8 bits (216), Expect = 9e-17
Identities = 54/152 (35%), Positives = 85/152 (55%), Gaps = 6/152 (3%)
Frame = +2
Query: 128 EKKVKKAKASEDGAAPKRKRATEVDAEPAAI-----EKPKKKKAAAEAADGDAAPAKKVK 292
EKK+K D K+++++ E ++ ++ K+KK +A D D + K
Sbjct: 19 EKKMKSETLDSDDTVVKKEKSSSKKKEKSSSSGKKDKEEKEKKKKRKAVDLDDSSDKSDN 78
Query: 293 KVKAASEDSEEPVKPPT-KLAAITAATPTSELGLDRFKLSEQVKSMLRSQNIESLFPIQA 469
+ D +P K + A + A P S L F++S+ +K +L S+ I++LFPIQA
Sbjct: 79 SSELVQADDLKPKKAKVMEEAVVEAEDPNS---LSNFRISKPLKDVLISKGIKALFPIQA 135
Query: 470 MTLEPAMEGLDVVGRARTGCGKTLAFTVPVVE 565
MT + ++G D+VGRARTG GKTLAF +P+VE
Sbjct: 136 MTFDNVIDGCDLVGRARTGQGKTLAFVLPIVE 167
>ref|NP_201025.1| DEAD box RNA helicase (prh75), putative [Arabidopsis thaliana]
gi|8809632|dbj|BAA97183.1| RNA helicase [Arabidopsis
thaliana] gi|15810145|gb|AAL07216.1| putative RNA
helicase [Arabidopsis thaliana]
gi|30793911|gb|AAP40408.1| putative DEAD/DEAH box RNA
helicase PRH75 [Arabidopsis thaliana]
Length = 671
Score = 81.6 bits (200), Expect = 7e-15
Identities = 57/161 (35%), Positives = 86/161 (53%), Gaps = 15/161 (9%)
Frame = +2
Query: 128 EKKVKKAKA-------SEDGAAPKRKRATEVDAEPAAIEKPKKK----KAAAEA----AD 262
EKK+KK A S+ G ++ + ++ D E + +K KKK KA+ E +D
Sbjct: 12 EKKMKKKMALDTPELDSKKGKKEQKLKLSDSDEEESEKKKSKKKDKKRKASEEEDEVKSD 71
Query: 263 GDAAPAKKVKKVKAASEDSEEPVKPPTKLAAITAATPTSELGLDRFKLSEQVKSMLRSQN 442
+ K KKVK ED E V P ++ +F++S ++ L++
Sbjct: 72 SSSEKKKSSKKVKLGVEDVE--VDNPNAVS--------------KFRISAPLREKLKANG 115
Query: 443 IESLFPIQAMTLEPAMEGLDVVGRARTGCGKTLAFTVPVVE 565
IE+LFPIQA T + ++G D+VGRARTG GKTLAF +P++E
Sbjct: 116 IEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILE 156
>emb|CAA68194.1| RNA helicase [Arabidopsis thaliana]
Length = 671
Score = 81.6 bits (200), Expect = 7e-15
Identities = 57/161 (35%), Positives = 86/161 (53%), Gaps = 15/161 (9%)
Frame = +2
Query: 128 EKKVKKAKA-------SEDGAAPKRKRATEVDAEPAAIEKPKKK----KAAAEA----AD 262
EKK+KK A S+ G ++ + ++ D E + +K KKK KA+ E +D
Sbjct: 12 EKKMKKKMALDTPELDSKKGKKEQKLKLSDSDEEESEKKKSKKKDKKRKASEEEDEVKSD 71
Query: 263 GDAAPAKKVKKVKAASEDSEEPVKPPTKLAAITAATPTSELGLDRFKLSEQVKSMLRSQN 442
+ K KKVK ED E V P ++ +F++S ++ L++
Sbjct: 72 SSSEKKKSSKKVKLGVEDVE--VDNPNAVS--------------KFRISAPLREKLKANG 115
Query: 443 IESLFPIQAMTLEPAMEGLDVVGRARTGCGKTLAFTVPVVE 565
IE+LFPIQA T + ++G D+VGRARTG GKTLAF +P++E
Sbjct: 116 IEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILE 156
>gb|AAK62631.1| AT5g62190/mmi9_10 [Arabidopsis thaliana]
Length = 671
Score = 79.7 bits (195), Expect = 3e-14
Identities = 56/161 (34%), Positives = 85/161 (52%), Gaps = 15/161 (9%)
Frame = +2
Query: 128 EKKVKKAKA-------SEDGAAPKRKRATEVDAEPAAIEKPKKK----KAAAEA----AD 262
EKK+KK A S+ G ++ + ++ D E + +K KKK KA+ E +D
Sbjct: 12 EKKMKKKMALDTPELDSKKGKKEQKLKLSDSDEEESEKKKSKKKDKKRKASEEEDEVKSD 71
Query: 263 GDAAPAKKVKKVKAASEDSEEPVKPPTKLAAITAATPTSELGLDRFKLSEQVKSMLRSQN 442
+ K KKVK ED E V P ++ +F++ ++ L++
Sbjct: 72 SSSEKKKSSKKVKLGVEDVE--VDNPNAVS--------------KFRIPAPLREKLKANG 115
Query: 443 IESLFPIQAMTLEPAMEGLDVVGRARTGCGKTLAFTVPVVE 565
IE+LFPIQA T + ++G D+VGRARTG GKTLAF +P++E
Sbjct: 116 IEALFPIQASTFDMVLDGADLVGRARTGQGKTLAFVLPILE 156
>gb|AAF40306.1|AF156667_1 RNA helicase [Vigna radiata]
Length = 713
Score = 79.0 bits (193), Expect = 4e-14
Identities = 54/146 (36%), Positives = 79/146 (53%)
Frame = +2
Query: 128 EKKVKKAKASEDGAAPKRKRATEVDAEPAAIEKPKKKKAAAEAADGDAAPAKKVKKVKAA 307
+KK KK KAS+ A A E D +E ++ + KK KK KA
Sbjct: 59 QKKAKKRKASDIEAMAATNDADE-DTSSELVEPESSREDDHK---------KKKKKKKAK 108
Query: 308 SEDSEEPVKPPTKLAAITAATPTSELGLDRFKLSEQVKSMLRSQNIESLFPIQAMTLEPA 487
SE E+P+ + P + + + ++SE ++ L+ + IESLFPIQAMT +
Sbjct: 109 SE--EQPLVMEAEEKEEKKEDPNA---VSKLRISEPLRLKLKEKGIESLFPIQAMTFDLV 163
Query: 488 MEGLDVVGRARTGCGKTLAFTVPVVE 565
++G D+VGRARTG GKTLAF +P++E
Sbjct: 164 LDGSDLVGRARTGQGKTLAFVLPILE 189
