Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000256A_C01 KCC000256A_c01
(625 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_294953.1| hypothetical protein [Deinococcus radiodurans] ... 48 1e-04
ref|XP_294442.1| similar to VENT-like homeobox 2; haemopoietic p... 45 9e-04
ref|ZP_00052545.1| COG1020: Non-ribosomal peptide synthetase mod... 44 0.002
gb|AAA86514.1| similar to Pseudomonas fluorescens uvrC gene prod... 44 0.002
ref|ZP_00057842.1| hypothetical protein [Thermobifida fusca] 42 0.007
>ref|NP_294953.1| hypothetical protein [Deinococcus radiodurans]
gi|7472709|pir||F75420 hypothetical protein -
Deinococcus radiodurans (strain R1)
gi|6458982|gb|AAF10810.1|AE001971_10 hypothetical
protein [Deinococcus radiodurans]
Length = 319
Score = 47.8 bits (112), Expect = 1e-04
Identities = 55/175 (31%), Positives = 72/175 (40%), Gaps = 22/175 (12%)
Frame = +1
Query: 73 RLAPPPPASCALARERAR---AVAVSAAL*LARLSRSRVRPAPSRPRLATRSPPWCGSSP 243
R A +SCA R+R R + ++ A +R+R PA S P +T G SP
Sbjct: 138 RAASTSGSSCAARRKRRRRHWGSSGPSSGCSANTTRARHAPARSSPLAST------GHSP 191
Query: 244 ATARASSRAMRAWW-ARRTSQTCSRARTWRLWA--------------RSWSASSCLASLS 378
A + R W A R S + RA + R W RS A + +
Sbjct: 192 AASGWGRSPSRNWCGAARPSVSSGRATSTRCWPAASANSVPKPPSSPRSVRAGTRWGCCT 251
Query: 379 WGSSAEASPRGHTTTRPMCSS----RLLPAPTPTL*SSPREPCSRLPLRRRHRPS 531
W A A+PR TTTR CS R+ TP S+P P S P RR RP+
Sbjct: 252 WTPGAPAAPRA-TTTRNSCSHSPSRRVWRLTTPG--STPSRPASARPPRRCARPA 303
Score = 32.7 bits (73), Expect = 4.4
Identities = 37/119 (31%), Positives = 45/119 (37%), Gaps = 5/119 (4%)
Frame = +1
Query: 157 ARLSRSRVRPAPSRPRLATRSPPWCGSSPATARASSRAMRAWWARRTSQTCSRARTWRLW 336
AR+ R R +PSR W S A W RR+ C WR
Sbjct: 91 ARVRRDRRSCSPSRRC-------WGWPSKGCRPGKRGGAGAGWPRRSKTWCG---GWR-- 138
Query: 337 ARSWSASSCLASLS-----WGSSAEASPRGHTTTRPMCSSRLLPAPTPTL*SSPREPCS 498
A S S SSC A WGSS +S TTR +R PA + L S+ P +
Sbjct: 139 AASTSGSSCAARRKRRRRHWGSSGPSSGCSANTTR----ARHAPARSSPLASTGHSPAA 193
>ref|XP_294442.1| similar to VENT-like homeobox 2; haemopoietic progenitor homeobox
[Homo sapiens]
Length = 453
Score = 45.1 bits (105), Expect = 9e-04
Identities = 42/140 (30%), Positives = 54/140 (38%), Gaps = 3/140 (2%)
Frame = +1
Query: 85 PPPASCALARERARAVAVSAAL*LARLSRSRVRPAPSRP--RLATRSPPWCGSSPATARA 258
P P + RE +AV++ A RS PAP R L + PW A+
Sbjct: 46 PGPGQTSGTREPPQAVSIKKA-------RSSNLPAPERAVAGLGKKPNPW---QAPCAQP 95
Query: 259 SSRAMRAWWARRTSQTCSRARTWRLW-ARSWSASSCLASLSWGSSAEASPRGHTTTRPMC 435
S + A W +S T RTW LW + W + L L ++ TT
Sbjct: 96 SPPSRSAPWRASSSTT----RTWALWNGKGWQGDAALGRLDKNLVSKTPDETETTNAG-- 149
Query: 436 SSRLLPAPTPTL*SSPREPC 495
LPA P L SPR PC
Sbjct: 150 ----LPAEQPLLCVSPRAPC 165
>ref|ZP_00052545.1| COG1020: Non-ribosomal peptide synthetase modules and related
proteins [Magnetospirillum magnetotacticum]
Length = 676
Score = 43.5 bits (101), Expect = 0.002
Identities = 37/101 (36%), Positives = 45/101 (43%), Gaps = 7/101 (6%)
Frame = +1
Query: 160 RLSRSRVRPAPSRPRLATRSPP----WCGSSPATARASS-RAMRAWWARRTSQTCSRART 324
R R R R P RP + PP SSP+T +S+ A+ W R +S C+R R
Sbjct: 2 RRKRRRCRTVPPRP--CSWPPPNRSSQARSSPSTPISSTISAVTHCWPRASSPPCARPRI 59
Query: 325 WRLWARSWSAS-SCLASLSWGS-SAEASPRGHTTTRPMCSS 441
WR A W S +C W S SPR T RP SS
Sbjct: 60 WR--ASPWKTSTACARCGRWPPVSTSGSPRRAPTVRPTSSS 98
>gb|AAA86514.1| similar to Pseudomonas fluorescens uvrC gene product encoded by
GenBank Accession Number L29642
Length = 117
Score = 43.5 bits (101), Expect = 0.002
Identities = 35/88 (39%), Positives = 39/88 (43%), Gaps = 1/88 (1%)
Frame = +2
Query: 101 ALWRGSARERSPYQLHCDSRG*AEAG*GQHHHAPA*QREAHRGAGVHQPRRAHHRERCAP 280
AL+R + R P H G EAG G+ HA R G G Q R A
Sbjct: 11 ALFRAAPARRGPPLGHRRPPG--EAGQGRQRHAA---RRDPGGGGRAQARAARAFRLGQG 65
Query: 281 GGPGGPARPVRGREH-GDSGQGHGALLP 361
GGPGG AR + GR H GD G H L P
Sbjct: 66 GGPGGRARSLXGRGHFGDDGAVHPRLFP 93
>ref|ZP_00057842.1| hypothetical protein [Thermobifida fusca]
Length = 440
Score = 42.0 bits (97), Expect = 0.007
Identities = 43/140 (30%), Positives = 51/140 (35%), Gaps = 14/140 (10%)
Frame = +2
Query: 182 GQHHHAPA*QREAHRGAGVHQPRRAHHRERCAPGGPGGPA-RPVRG--REHGDSGQGHGA 352
G H P +R H G H+P H E +P PG A RP RG R H G G
Sbjct: 44 GPRHSRPGQRRPRHHGVSPHRP----HGEPGSPHHPGSAAPRPARGHARLHDRPGSGPVC 99
Query: 353 LLPAWPHCPG-----------AHLRRHRRAVIQRRGRCVHRASYQPRRRHCDHPRGSPAV 499
PA G H RHRRA + R HR + RR RG P
Sbjct: 100 ARPASHPRVGPAGVGHRGRNPPHSVRHRRACPPQ--RFPHRPVLRTRRPLGIDDRGGPVT 157
Query: 500 DSHSGAGTVRQLGGLPVRDC 559
+ T+ G + R C
Sbjct: 158 NPTPAPATLSVCGTVVARYC 177
