Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000250A_C01 KCC000250A_c01
(552 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_330346.1| hypothetical protein [Neurospora crassa] gi|289... 100 1e-20
ref|XP_315212.1| ENSANGP00000020889 [Anopheles gambiae] gi|21298... 99 3e-20
dbj|BAB89854.1| putative signal recognition particle 54K protein... 99 5e-20
sp|P49969|SR52_HORVU SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN 2... 98 6e-20
sp|P49968|SR51_HORVU SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN 1... 98 8e-20
>ref|XP_330346.1| hypothetical protein [Neurospora crassa] gi|28922154|gb|EAA31407.1|
hypothetical protein [Neurospora crassa]
gi|28949956|emb|CAD70717.1| probable signal recognition
particle subunit SRP54 [Neurospora crassa]
Length = 511
Score = 100 bits (250), Expect = 1e-20
Identities = 50/95 (52%), Positives = 69/95 (72%)
Frame = +3
Query: 261 MVLQELGSRISKAVATLAASSVIDEKVLDALLKEICTALLQSDVNVKQVANLRNGVKKRV 440
MVLQ+LG RI+ AV+ L + +DEK D +LKEIC+ALL++DVNV+ V LR +K V
Sbjct: 1 MVLQDLGRRINAAVSDLTRAPNLDEKAFDGMLKEICSALLEADVNVRLVGQLRKSIKSTV 60
Query: 441 NIQELAAGLNKQRVIEKAVFDELCDMLDSGADPKK 545
N +EL +NK+R+I+KAVFDEL ++D A+P K
Sbjct: 61 NFKELPPAVNKKRLIQKAVFDELVRLVDPHAEPFK 95
>ref|XP_315212.1| ENSANGP00000020889 [Anopheles gambiae] gi|21298416|gb|EAA10561.1|
ENSANGP00000020889 [Anopheles gambiae str. PEST]
Length = 506
Score = 99.4 bits (246), Expect = 3e-20
Identities = 46/94 (48%), Positives = 72/94 (75%)
Frame = +3
Query: 258 KMVLQELGSRISKAVATLAASSVIDEKVLDALLKEICTALLQSDVNVKQVANLRNGVKKR 437
KMVL +LG +I+ A+ +L+ +++I+E+VLD++LKEICTALL++DVN++ V LR V+
Sbjct: 3 KMVLADLGRKITNALHSLSKATIINEEVLDSMLKEICTALLEADVNIRLVKKLRENVRSV 62
Query: 438 VNIQELAAGLNKQRVIEKAVFDELCDMLDSGADP 539
++ E+A GLNK+R+I+ AVF EL ++D G P
Sbjct: 63 IDFDEMAGGLNKRRMIQSAVFKELVKLVDPGVKP 96
>dbj|BAB89854.1| putative signal recognition particle 54K protein [Oryza sativa
(japonica cultivar-group)] gi|21743252|dbj|BAC03250.1|
putative signal recognition particle 54K protein [Oryza
sativa (japonica cultivar-group)]
gi|32879776|dbj|BAC79360.1| signal recognition particle
54kDa subunit [Oryza sativa (japonica cultivar-group)]
Length = 496
Score = 98.6 bits (244), Expect = 5e-20
Identities = 52/98 (53%), Positives = 72/98 (73%), Gaps = 3/98 (3%)
Frame = +3
Query: 261 MVLQELGSRISKAVATLAASSVIDEKVLDALLKEICTALLQSDVNVKQVANLRNGVKKRV 440
MVL +LG IS+A+A ++ ++VIDEKVL L EI ALLQSDV K V ++++ +K+ V
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLSDCLNEISRALLQSDVQFKMVRDMQSNIKRIV 60
Query: 441 NIQELAAGLNKQRVIEKAVFDELCDMLDSGA---DPKK 545
N++ LAAG NK+R+I++AVF ELC+MLD G PKK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPSFTPKK 98
>sp|P49969|SR52_HORVU SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN 2 (SRP54)
gi|7440068|pir||T06186 signal recognition particle 54 K
protein 2 - barley gi|1020002|gb|AAA79355.1| signal
recognition particle 54 kDa subunit [Hordeum vulgare]
Length = 497
Score = 98.2 bits (243), Expect = 6e-20
Identities = 52/98 (53%), Positives = 71/98 (72%), Gaps = 3/98 (3%)
Frame = +3
Query: 261 MVLQELGSRISKAVATLAASSVIDEKVLDALLKEICTALLQSDVNVKQVANLRNGVKKRV 440
MVL +LG IS+A+A ++ ++VIDEKVL L EI ALLQSDV K V +++ ++K V
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60
Query: 441 NIQELAAGLNKQRVIEKAVFDELCDMLDSGA---DPKK 545
N++ LAAG NK+R+I++AVF ELC+MLD G PKK
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPGKPAFTPKK 98
>sp|P49968|SR51_HORVU SIGNAL RECOGNITION PARTICLE 54 KD PROTEIN 1 (SRP54)
gi|7440067|pir||T06185 signal recognition particle 54 K
protein - barley gi|1020000|gb|AAA79354.1| signal
recognition particle 54 kDa subunit [Hordeum vulgare]
Length = 497
Score = 97.8 bits (242), Expect = 8e-20
Identities = 49/90 (54%), Positives = 68/90 (75%)
Frame = +3
Query: 261 MVLQELGSRISKAVATLAASSVIDEKVLDALLKEICTALLQSDVNVKQVANLRNGVKKRV 440
MVL +LG IS+A+A ++ ++VIDEKVL L EI ALLQSDV K V +++ ++K V
Sbjct: 1 MVLAQLGGSISRALAQMSNATVIDEKVLGECLNEISRALLQSDVQFKMVRDMQTNIRKIV 60
Query: 441 NIQELAAGLNKQRVIEKAVFDELCDMLDSG 530
N++ LAAG NK+R+I++AVF ELC+MLD G
Sbjct: 61 NLETLAAGTNKRRIIQQAVFTELCNMLDPG 90
