KCC000248A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000248A_C01 KCC000248A_c01
caCTAAATCACGGCTGCACAAGACACATCCATTCATCTCCACACGCGCCTGATTCGCGCA
TCCTGAGGAACTTTCATAGCCGTGACTTGCCCTGCCCCCACTTAAGGGCGGTTGCCGCAA
GGCCCTGAGTCAGCACCTTAGGCACTAACCTTATGCTTTTGGGCTATCACAAGCTTGTCA
GCAAGTCGCGGAGGCCTCAGAGGACCTCTGACGGTGACGGGGTCCGAGCACACAAGCTCT
AATGACCGGTTTCTGCCGAGTTTGAGGGCCGAGGAGGCCCGCTTTGGCCCGCCACGATGG
ACGTCTTCGAGGAGGTTGCTGATACATTCTCTGGAGCCAGTGGTTGCTCAATCACGGACC
TATTTTCCTCGCGTCTGGGCTCGCTGAACCTGAGTTTCACCTCCAACTCGTTCGACCCAG
CGTTCACGTTCTCAAGCTCTCGCTCATCGTCGTTGCATCACTGCGAGAGCACCTCGCGCA
CCTCGGCCGCAATCGCTGCGGCCAGCGCTGCTGCATCCGGCGCCGCTGCGCCCGCTGCCA
GCGCCTCCGCAGCCAGCGGTGCCGCCGCGGACACGCCCTCGCGGGAGGCCTCCCCGCCGC
CGTTGCTGCTCTTGCCGCCGGTGATCTCGGGCGGGCCCCCGCGCCGCCATGTCCACGTGC
TGCGGCGCAACAGCCTGCCTTGTGGCGTGGCGACGTCAACGGCGGACCCGCATGCCGACG
CGGCGACAGGCGACGGCGCCTTTAACCGGCTAAGCACCTCCGGCGGCGGCAGCAGCGTCA
GCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000248A_C01 KCC000248A_c01
         (783 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_039850.1| Tegument protein [Human herpesvirus 4] gi|13557...    51  2e-05
ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE ...    50  3e-05
gb|AAQ82688.1| Epa4p [Candida glabrata]                                47  3e-04
ref|XP_290770.2| KIAA1447 protein [Homo sapiens]                       47  3e-04
pir||T46707 proteophosphoglycan, membrane-associated [imported] ...    47  3e-04

>ref|NP_039850.1| Tegument protein [Human herpesvirus 4] gi|135574|sp|P03186|TEGU_EBV
           LARGE TEGUMENT PROTEIN gi|73929|pir||QQBE8 BPLF1 protein
           - human herpesvirus 4 (strain B95-8)
           gi|1334853|emb|CAA24839.1| BPLF1 reading frame, 1 NXT/S,
           analogous to VZV RF22 [Human herpesvirus 4]
           gi|23893598|emb|CAD53402.1| large tegument protein
           [Human herpesvirus 4] gi|225109|prf||1208408E gene BPLF1
          Length = 3149

 Score = 50.8 bits (120), Expect = 2e-05
 Identities = 40/115 (34%), Positives = 59/115 (50%), Gaps = 6/115 (5%)
 Frame = +3

Query: 312 EVADTFSGASGCSITDLFSSRLGSLNL------SFTSNSFDPAFTFSSSRSSSLHHCEST 473
           E A T    S   +   F  R+   NL      SFTS+SF PA  +S ++++S     ++
Sbjct: 279 EAAGTPGADSSPPVMLPFERRIIPYNLRPLPSRSFTSDSF-PAARYSPAKTNSPPSSPAS 337

Query: 474 SRTSAAIAAASAAASGAAAPAASASAASGAAADTPSREASPPPLLLLPPVISGGP 638
           +  ++A  A++A AS A A AA ASAA  +AA   +  AS PPL +  P +   P
Sbjct: 338 AAPASAAPASAAPASAAPASAAPASAAPASAAPASAAPASSPPLFIPIPGLGHTP 392

 Score = 32.7 bits (73), Expect = 6.7
 Identities = 30/118 (25%), Positives = 47/118 (39%), Gaps = 20/118 (16%)
 Frame = +1

Query: 310 RRLLIHSLEPVVAQSRTYFPRVWAR*T*V---SPPTRSTQRSRSQALAHRRCITARAPRA 480
           RR++ ++L P+ ++S T      AR +     SPP+     + + A        + AP +
Sbjct: 298 RRIIPYNLRPLPSRSFTSDSFPAARYSPAKTNSPPSSPASAAPASAAPASAAPASAAPAS 357

Query: 481 PRPQSLRPALLHPAPLRPLPAPP---------------QPAVPPRTRPRGRP--PRRR 603
             P S  PA   PA   P  +PP                P+ PPR      P  P+R+
Sbjct: 358 AAPASAAPASAAPASAAPASSPPLFIPIPGLGHTPGVPAPSTPPRASSGAAPQTPKRK 415

>ref|ZP_00089904.1| COG1674: DNA segregation ATPase FtsK/SpoIIIE and related proteins
           [Azotobacter vinelandii]
          Length = 1336

 Score = 50.4 bits (119), Expect = 3e-05
 Identities = 41/120 (34%), Positives = 46/120 (38%), Gaps = 1/120 (0%)
 Frame = +1

Query: 367 PRVWAR*T*VSPPTRSTQRSRSQALAHRRCITARAPRAPRPQSLRPALLHPAPLRPLPAP 546
           P  W R    SPP R  + S        RC +A  P   RP    P L  P    P  AP
Sbjct: 209 PGAWRRTARSSPPPRPCRAS-----VGLRCPSAAGPDRARPSDSPPPLPGPVARTPASAP 263

Query: 547 PQPAVPPRTRPRGRPPRRRCCSCRR*SRAGPRAAMSTCCG-ATACLVAWRRQRRTRMPTR 723
           P P    R  P GR P+    S RR  R  P A   T  G A  C  +  R+   R P R
Sbjct: 264 PGPPATTRRPPAGRAPKATAASWRRTGR-WPCAMPGTATGRAARCPRSPPRRGAVRSPDR 322

 Score = 35.4 bits (80), Expect = 1.0
 Identities = 31/100 (31%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
 Frame = -1

Query: 657 RGHGGAGARPRSPAARAATAAGRPPARACPRRHR----WLRRRWQRAQRRRMQQRWPQRL 490
           R H G+G R   P +R  T   R  A+  P +      W+R R ++  R R     P R 
Sbjct: 122 RRHPGSGTRRAGPPSRRLTRQRRAAAKTRPSQPGPVTPWVRARRRQRYRPRGSGGSPHRP 181

Query: 489 RPRCARCSRSDATTMSESLRT*TLGRT--SWR*NSGSASP 376
            P  AR   + A T S S      GR+  +WR  + S+ P
Sbjct: 182 APVPARRPPARARTGSRSPSPPPAGRSPGAWRRTARSSPP 221

>gb|AAQ82688.1| Epa4p [Candida glabrata]
          Length = 1416

 Score = 47.4 bits (111), Expect = 3e-04
 Identities = 32/103 (31%), Positives = 62/103 (60%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  S +   SS   S + S +S+S  P+ + SSS SSS     S+S +S++ +++S+
Sbjct: 404 SSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSS----SSSSSSSSSSSSSSS 459

Query: 510 AASGAAAPAASASAASGAAADTPSREASPPPLLLLPPVISGGP 638
           ++S + +P++S+S++S +++ +PS + S  P+   P   S  P
Sbjct: 460 SSSSSPSPSSSSSSSSSSSSSSPSIQPSSKPVDPSPADPSNNP 502

 Score = 44.7 bits (104), Expect = 0.002
 Identities = 27/88 (30%), Positives = 56/88 (62%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  S +   SS   S + S +S+S  P+ + SSS SSS     S+S +S++ +++S+
Sbjct: 366 SSSSSSSSSPSPSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 425

Query: 510 AASGAAAPAASASAASGAAADTPSREAS 593
           ++S + +P++S+S++S +++ + S  +S
Sbjct: 426 SSSSSPSPSSSSSSSSSSSSSSSSSSSS 453

 Score = 43.1 bits (100), Expect = 0.005
 Identities = 26/88 (29%), Positives = 55/88 (61%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  S +   S    S + S +S+S  P+ + SSS SSS     S+S +S++ +++S+
Sbjct: 364 SSSSSSSSSSSPSPSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSS 423

Query: 510 AASGAAAPAASASAASGAAADTPSREAS 593
           ++S +++P+ S+S++S +++ + S  +S
Sbjct: 424 SSSSSSSPSPSSSSSSSSSSSSSSSSSS 451

 Score = 43.1 bits (100), Expect = 0.005
 Identities = 28/91 (30%), Positives = 56/91 (60%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  S +   SS   S + S +S+S  P+ + SSS SSS     S+S  S + +++S+
Sbjct: 346 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSS---SSSSSSPSPSSSSSSS 402

Query: 510 AASGAAAPAASASAASGAAADTPSREASPPP 602
           ++S +++ ++S+S++S +++ + S  +SP P
Sbjct: 403 SSSSSSSSSSSSSSSSSSSSSSSSSSSSPSP 433

 Score = 42.4 bits (98), Expect = 0.008
 Identities = 31/128 (24%), Positives = 67/128 (52%)
 Frame = +3

Query: 399 TSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASAAASGAAAPAASASAASGAAADTP 578
           +S+S  P+ + SSS SSS     S+S +S++ +++S+++S +++P+ S+S++S +++   
Sbjct: 331 SSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSS--- 387

Query: 579 SREASPPPLLLLPPVISGGPPRRHVHVLRRNSLPCGVATSTADPHADAATGDGAFNRLST 758
           S  +SP P        S             +S     ++S++ P   +++   + +  S+
Sbjct: 388 SSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSS 447

Query: 759 SGGGSSVS 782
           S   SS S
Sbjct: 448 SSSSSSSS 455

 Score = 42.4 bits (98), Expect = 0.008
 Identities = 26/89 (29%), Positives = 55/89 (61%)
 Frame = +3

Query: 336 ASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASAAA 515
           +S  S +   SS   S + S +S+S   + + SSS SSS     S+S +S++ + +S+++
Sbjct: 379 SSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSS 438

Query: 516 SGAAAPAASASAASGAAADTPSREASPPP 602
           S +++ ++S+S++S +++ + S  +SP P
Sbjct: 439 SSSSSSSSSSSSSSSSSSSSSSSSSSPSP 467

 Score = 40.8 bits (94), Expect = 0.025
 Identities = 26/89 (29%), Positives = 54/89 (60%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  S +   SS   S + S +S+S   + + SSS SSS     S+S +S + +++S+
Sbjct: 379 SSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSS 438

Query: 510 AASGAAAPAASASAASGAAADTPSREASP 596
           ++S +++ ++S+S++S +++ + S   SP
Sbjct: 439 SSSSSSSSSSSSSSSSSSSSSSSSSSPSP 467

 Score = 40.4 bits (93), Expect = 0.032
 Identities = 32/139 (23%), Positives = 70/139 (50%)
 Frame = +3

Query: 366 SSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASAAASGAAAPAASA 545
           SS   S + S +S+S   + + SSS SSS     S S +S++ +++S+++S + +P++S+
Sbjct: 340 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSPSPSSSS 399

Query: 546 SAASGAAADTPSREASPPPLLLLPPVISGGPPRRHVHVLRRNSLPCGVATSTADPHADAA 725
           S++S +++ + S  +S           S   P         +S     ++S++   + ++
Sbjct: 400 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSS 459

Query: 726 TGDGAFNRLSTSGGGSSVS 782
           +   + +  S+S   SS S
Sbjct: 460 SSSSSPSPSSSSSSSSSSS 478

 Score = 39.7 bits (91), Expect = 0.055
 Identities = 27/91 (29%), Positives = 57/91 (61%), Gaps = 3/91 (3%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSS---SRSSSLHHCESTSRTSAAIAA 500
           S +S  S +   SS   S + S +S+S  P+ + SS   S SSS     S+S +S++ ++
Sbjct: 348 SSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSPSPSSSSSSSSSSSS 407

Query: 501 ASAAASGAAAPAASASAASGAAADTPSREAS 593
           +S+++S +++ ++S+S++S +++ +PS  +S
Sbjct: 408 SSSSSSSSSSSSSSSSSSSSSSSPSPSSSSS 438

 Score = 38.9 bits (89), Expect = 0.094
 Identities = 24/88 (27%), Positives = 53/88 (59%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  S     SS   S + S +S+S   + + SSS SSS      +  +S++ +++S+
Sbjct: 385 SSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSS 444

Query: 510 AASGAAAPAASASAASGAAADTPSREAS 593
           ++S +++ ++S+S++S +++ +PS  +S
Sbjct: 445 SSSSSSSSSSSSSSSSSSSSPSPSSSSS 472

 Score = 38.9 bits (89), Expect = 0.094
 Identities = 24/88 (27%), Positives = 53/88 (59%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  S +    S   S + S +S+S   + + SSS SSS     S+   S++ +++S+
Sbjct: 383 SSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSS 442

Query: 510 AASGAAAPAASASAASGAAADTPSREAS 593
           ++S +++ ++S+S++S +++ +PS  +S
Sbjct: 443 SSSSSSSSSSSSSSSSSSSSSSPSPSSS 470

 Score = 38.1 bits (87), Expect = 0.16
 Identities = 25/90 (27%), Positives = 52/90 (57%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  S +   SS       S +S+S   + + SSS SSS     S+S +S++  + S+
Sbjct: 376 SPSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSS 435

Query: 510 AASGAAAPAASASAASGAAADTPSREASPP 599
           ++S +++ ++S+S++S +++ + S  +S P
Sbjct: 436 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSP 465

 Score = 37.7 bits (86), Expect = 0.21
 Identities = 24/95 (25%), Positives = 56/95 (58%)
 Frame = +3

Query: 309 EEVADTFSGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSA 488
           +++  + S +   S +   SS   S + S +S+S   + + SSS SSS     S+S +S+
Sbjct: 327 QDINSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSS 386

Query: 489 AIAAASAAASGAAAPAASASAASGAAADTPSREAS 593
           + +++S + S +++ ++S+S++S +++ + S  +S
Sbjct: 387 SSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSS 421

 Score = 35.0 bits (79), Expect = 1.4
 Identities = 27/103 (26%), Positives = 51/103 (49%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  S +   SS   S + S +S+S   + + SSS SSS     S+   S++ +++S+
Sbjct: 417 SSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSS 476

Query: 510 AASGAAAPAASASAASGAAADTPSREASPPPLLLLPPVISGGP 638
           ++S + +   S+     + AD  +  +S  P  + P  I+  P
Sbjct: 477 SSSSSPSIQPSSKPVDPSPADPSNNPSSVNPSSVNPSSINSSP 519

>ref|XP_290770.2| KIAA1447 protein [Homo sapiens]
          Length = 174

 Score = 47.4 bits (111), Expect = 3e-04
 Identities = 43/131 (32%), Positives = 52/131 (38%), Gaps = 7/131 (5%)
 Frame = +1

Query: 412 STQRSRSQALAHRRCITARAPRAPRPQSLRPALLHPAPLRPLPAPPQPAVPP--RTRPRG 585
           S  R+R+       C  A +P  P P    P L  P P    P PP  + PP  RTRP  
Sbjct: 47  SRTRTRTGRGWRPACPPASSPACPCPL---PPLARPPPPPQAPCPPPASAPPTTRTRPTA 103

Query: 586 RPPRRRCCSCRR*SRAGPRAAMSTCCGATACLVAWRRQRRTRMPTRRQA-----TAPLTG 750
           +  R R C CR    A P     +      C  A R    TRMP+          AP+  
Sbjct: 104 QTTRTRLCCCR---PASPTPCPPSWPSPRPC--APRAAALTRMPSAASCPGPRWLAPVRA 158

Query: 751 *APPAAAAASA 783
            AP AAA  S+
Sbjct: 159 QAPAAAANPSS 169

>pir||T46707 proteophosphoglycan, membrane-associated [imported] - Leishmania
           major (fragment) gi|5420389|emb|CAB46680.1|
           proteophosphoglycan [Leishmania major]
          Length = 383

 Score = 47.0 bits (110), Expect = 3e-04
 Identities = 41/152 (26%), Positives = 76/152 (49%), Gaps = 3/152 (1%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  + +   S+   S + + +S+S  P+ + SS+ SSS     S S +SA  +++S+
Sbjct: 12  SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSS 71

Query: 510 A--ASGAAAPAASASAASGAAADTPSREASPPPL-LLLPPVISGGPPRRHVHVLRRNSLP 680
           A  AS ++AP++S+SA S +++  PS  +S P       P  S   P         +S  
Sbjct: 72  APSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 131

Query: 681 CGVATSTADPHADAATGDGAFNRLSTSGGGSS 776
              A+S++ P + +++   A +  + S   SS
Sbjct: 132 APSASSSSAPSSSSSSAPSASSSSAPSSSSSS 163

 Score = 47.0 bits (110), Expect = 3e-04
 Identities = 37/129 (28%), Positives = 66/129 (50%), Gaps = 3/129 (2%)
 Frame = +3

Query: 399 TSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA-AASGAAAPAASASAASGAAADT 575
           +S+S  P+ + SS+ SSS     S S +SA  +++SA +AS ++AP++S+SA S +++  
Sbjct: 51  SSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSA 110

Query: 576 PSREASPPPL--LLLPPVISGGPPRRHVHVLRRNSLPCGVATSTADPHADAATGDGAFNR 749
           PS  +S P       P   S  P          +S     A+S++ P + +++   A + 
Sbjct: 111 PSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSS 170

Query: 750 LSTSGGGSS 776
            + S   SS
Sbjct: 171 SAPSSSSSS 179

 Score = 43.1 bits (100), Expect = 0.005
 Identities = 35/153 (22%), Positives = 75/153 (48%)
 Frame = +3

Query: 318 ADTFSGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIA 497
           A + S +S  S +   +    S +   +S+S  P+ + SS+ SSS     ++S ++ + +
Sbjct: 40  APSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSS 99

Query: 498 AASAAASGAAAPAASASAASGAAADTPSREASPPPLLLLPPVISGGPPRRHVHVLRRNSL 677
           +++ +AS ++AP++S+SA S +++  PS  +S P         S  P          +S 
Sbjct: 100 SSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAP-----SASSSSAPSSSSSSAPSASSS 154

Query: 678 PCGVATSTADPHADAATGDGAFNRLSTSGGGSS 776
               ++S++ P A +++   + +  + S   SS
Sbjct: 155 SAPSSSSSSAPSASSSSAPSSSSSSAPSASSSS 187

 Score = 42.7 bits (99), Expect = 0.006
 Identities = 26/70 (37%), Positives = 45/70 (64%), Gaps = 2/70 (2%)
 Frame = +3

Query: 399 TSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASAA--ASGAAAPAASASAASGAAAD 572
           +S+S  P+ + SS+ SSS     S S +SA  +++S+A  AS ++AP++S+SA S +++ 
Sbjct: 143 SSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSS 202

Query: 573 TPSREASPPP 602
            PS  +S  P
Sbjct: 203 APSSSSSSAP 212

 Score = 40.0 bits (92), Expect = 0.042
 Identities = 30/93 (32%), Positives = 56/93 (59%), Gaps = 3/93 (3%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  + +   S+   S + + +S+S  P+ + SS+ SSS     S S +SA  +++S+
Sbjct: 104 SASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSS 163

Query: 510 A--ASGAAAPAASASAA-SGAAADTPSREASPP 599
           A  AS ++AP++S+S+A S +++  PS  +S P
Sbjct: 164 APSASSSSAPSSSSSSAPSASSSSAPSSSSSAP 196

 Score = 37.7 bits (86), Expect = 0.21
 Identities = 32/132 (24%), Positives = 66/132 (49%), Gaps = 4/132 (3%)
 Frame = +3

Query: 399 TSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASAAASGAAAPAASASAA-SGAAADT 575
           +S+S  P+ + SS+ SSS     ++S ++ + ++++ +AS ++AP++S+S+A S +++  
Sbjct: 5   SSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSA 64

Query: 576 PSREASPPPLL---LLPPVISGGPPRRHVHVLRRNSLPCGVATSTADPHADAATGDGAFN 746
           PS  +S  P       P   S  P          +S     ++S+A   + +A    + +
Sbjct: 65  PSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSS 124

Query: 747 RLSTSGGGSSVS 782
             S+S    S S
Sbjct: 125 APSSSSSAPSAS 136

 Score = 37.0 bits (84), Expect = 0.36
 Identities = 22/57 (38%), Positives = 36/57 (62%), Gaps = 1/57 (1%)
 Frame = +3

Query: 435 SSRSSSLHHCESTSRTSAAIAAASA-AASGAAAPAASASAASGAAADTPSREASPPP 602
           SS  SS     S S +SA  +++SA +AS ++AP++S+SA S +++  PS  +S  P
Sbjct: 1   SSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAP 57

 Score = 35.8 bits (81), Expect = 0.79
 Identities = 30/94 (31%), Positives = 54/94 (56%), Gaps = 3/94 (3%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  S +   +    S +    S+S  P+ + SS+ S+S     S+S +SA  +A+S+
Sbjct: 128 SSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAP-SASSS 186

Query: 510 AA--SGAAAPAASASAA-SGAAADTPSREASPPP 602
           +A  S ++AP+AS+S+A S +++  PS  +S  P
Sbjct: 187 SAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAP 220

 Score = 33.9 bits (76), Expect = 3.0
 Identities = 24/96 (25%), Positives = 52/96 (54%)
 Frame = +3

Query: 330 SGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASA 509
           S +S  + +   SS   + + S  S+S   A + SSS + S      ++ +S+A +++S+
Sbjct: 150 SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 209

Query: 510 AASGAAAPAASASAASGAAADTPSREASPPPLLLLP 617
           +A  A++ +A +S++S  ++ + +    P P  +LP
Sbjct: 210 SAPSASSSSAPSSSSSAPSSSSTTTTMDPTPDPVLP 245

 Score = 33.5 bits (75), Expect = 3.9
 Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 9/106 (8%)
 Frame = +3

Query: 318 ADTFSGASGCSITDLFSSRLGSLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIA 497
           A + S +S  S +   +    S +    S+S  P+ + SS+ S+S     S+S +SA  A
Sbjct: 140 APSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSS-SSAPSA 198

Query: 498 AASAAASGAAAPAASASAAS---------GAAADTPSREASPPPLL 608
           ++S+A S +++ A SAS++S          +++ T + + +P P+L
Sbjct: 199 SSSSAPSSSSSSAPSASSSSAPSSSSSAPSSSSTTTTMDPTPDPVL 244

 Score = 32.7 bits (73), Expect = 6.7
 Identities = 26/77 (33%), Positives = 41/77 (52%), Gaps = 3/77 (3%)
 Frame = +3

Query: 381 SLNLSFTSNSFDPAFTFSSSRSSSLHHCESTSRTSAAIAAASAAASGAAAPAASA---SA 551
           S + S  S S   A + SSS  S+      +S +SA  A++S+A S +++ A SA   SA
Sbjct: 5   SSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSA 64

Query: 552 ASGAAADTPSREASPPP 602
            S +++  PS  +S  P
Sbjct: 65  PSSSSSSAPSASSSSAP 81



EST assemble image


clone accession position
1 LCL100e10_r AV631832 1 488
2 LCL061c10_r AV629578 3 474
3 LCL073e04_r AV630118 3 449
4 LCL072g04_r AV630084 8 389
5 LCL070h01_r AV630006 8 449
6 LCL027a09_r AV627458 9 367
7 HCL079c11_r AV643968 11 433
8 LCL076g04_r AV630289 11 486
9 HCL020d12_r AV640680 11 487
10 LCL086b12_r AV630911 11 476
11 HCL061d09_r AV642970 11 515
12 LCL017f10_r AV626899 11 231
13 CL59c09_r AV397926 11 480
14 HCL100g01_r AV645292 13 342
15 HCL008c10_r AV639983 13 394
16 LCL003f12_r AV626179 14 359
17 LCL013e10_r AV626679 14 158
18 CL46a08_r AV395633 17 254
19 CL33f04_r AV394974 20 143
20 HCL068e01_r AV643369 22 453
21 LCL096c09_r AV631570 22 334
22 CL58a03_r AV396190 24 186
23 HCL018f07_r AV640583 24 480
24 CL44h03_r AV395579 24 410
25 HCL025c09_r AV640953 26 437
26 HCL025c12_r AV640955 30 424
27 CL44a09_r AV395604 32 333
28 HCL028a01_r AV641113 33 487
29 CL13d02_r AV393907 34 515
30 CL20e07_r AV394287 34 483
31 HCL090d05_r AV644549 34 389
32 HCL099c11_r AV645183 36 480
33 HCL042h11_r AV641949 37 502
34 HCL018e01_r AV640569 40 476
35 LCL080d10_r AV630539 58 380
36 LCL099g03_r AV631780 145 451
37 CL22g05_r AV394245 184 397
38 HCL043e09_r AV641992 208 736
39 MXL005f08_r BP093251 352 786




Chlamydomonas reinhardtii
Kazusa DNA Research Institute