KCC000241A_c01_1
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000241A_C01_1 KCC000241A_c01_1
CTGACCTTGCAGCCACCTCGGCTTCGGTACTCTCGCTTTACTTCCCAGCTCGAGCTATCG
CTCTCGCCTAGCGTTCACGCTGGCGCCCCGCAATCTCGCAACCGCTCTTTTAGCGCGCAG
CTCTACTATCCTGTGCAGCCTAGGCTCTCAGGCTATCATCCCAAGGTCTACTCCAGTCGT
TCGGTCCAACCGCGTCATCATGACAACTTCCGAGGTTCTGAGTCCCCCGCCCCCGAGCCA
GGTGGCTAGCCTGGCTCAGCCGCAGTTCAACGTGGAGGCGCTTCAGGCCTTCTCGATGCC
CCTGGTGGCCGACGTTGTCAACACTGAAAATGGCGACGTCGCTTCGTTCGCCCGCAGCTC
CTGGCACAAGGAGTCGGGCAAGGCGGGGGCGTTCGGCCTGCCGACCATGCTGGATATGAA
GGCTGAGGCTCTGGAGCAGGTGCAGCTGGACACCTGGTCGGCGCAGCCTGTGGACCGTGG
TCCGGCAGCAGCGGCTCCTGACCCCAAGCTGCTGCGCTCCTGGCAGTACCAGGCTACTGG
CAAGCTTGCAACCGCTCAGGTCCTGGTGGACGTCAAGGCTGAGCACATCAAGGCTGGTGG
CCCCATGGGCATGAAGCAGGAGGCCATTAAGCACATCCTGCGCCACAAGCCGGACGACAC
CTTCTATGTGGTTGACCTGGCTAACGTGCAGCGCATGTTCAAGGTAATGAATTGATCCTC
GCCGTCGCGACTACCAGCGCGCGCGAGCGGGGTGGGTCGGGACCATGGTTGGGTTTCGTT
CATGCCTGTGGGTTGGGCTGCGCCGTGCATGCCATGGCGCCTGGTTGCGTAGCGGAGCGC
GCGAGAGCGAGCGGCACGGCGAATGAGCATGCGCAATTCCGAATTAACTCGGCCCTGGTG
TGCTGTCCTATGTTCGACCTCGCAGGCTAGCCCTGCCTGACTTTTCATTCGCAACCATTA
GGCATGTGCCCCCACACATCCCCACCACACCACCACCACCACGCGCCCGGCATCGCGTCA
TCTACATCCACGCCTGCATCAAGCTGCTCTGCTCGGCCTGGAGTCATCCGGGCCTTGCCA
TCAGCGCCAAGTGCACGTCAACGCACACGCCTCACCAAGCGCAAGCCTTCTCTTTCATGG
GCAAGGTCTTAAGCGGTGGTGGTGGTGGTGGCGGCTGGCACC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000241A_C01_1 KCC000241A_c01_1
         (1182 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P03181|YHL1_EBV HYPOTHETICAL BHLF1 PROTEIN gi|73912|pir||QQBE...    64  4e-09
ref|XP_321584.1| ENSANGP00000011587 [Anopheles gambiae] gi|21288...    58  3e-07
gb|AAA66445.1| unknown protein                                         56  1e-06
gb|AAC82365.1| unknown [Myxococcus xanthus]                            55  2e-06
gb|AAK53449.1| unknown [Streptomyces aureofaciens]                     49  2e-04

>sp|P03181|YHL1_EBV HYPOTHETICAL BHLF1 PROTEIN gi|73912|pir||QQBE3 BHLF1 protein -
           human herpesvirus 4 (strain B95-8)
           gi|23893591|emb|CAD53473.1| BHLF1 early reading frame
           [Human herpesvirus 4]
          Length = 660

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 75/216 (34%), Positives = 81/216 (36%), Gaps = 32/216 (14%)
 Frame = -2

Query: 764 GPDPPRSRALVVATARINSLP*TC--AAR*PGQPHRRCRPACGAGCA*WPPA-----SCP 606
           GP P RS A   A  R +  P  C  +AR PG P R  R   GA     PP      S P
Sbjct: 251 GPPPTRSGA---AAQRTHRRPPGCPRSARNPGCP-RTWRRRSGAQRGHPPPGAGQRPSGP 306

Query: 605 WGHQP*CAQP*RP-------------------PGPERLQACQ*PGTARSAAAWGQEPLLP 483
            G +P  A P  P                   P PER      P  A       QEP LP
Sbjct: 307 TGGRP--AAPGAPGTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAARLPPERQEPRLP 364

Query: 482 DHGPQAAPTRCPAAPAPEPQPSYPAWSAGRTPPPCPTPCAR-SCGRTKRRRHFQC*QRRP 306
                AA  RCPA P P  +    A    R PP CP       C RT RRR        P
Sbjct: 365 QD--LAAAQRCPAGP-PPTRSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPP 421

Query: 305 PGASRRPEAPPR*TAAEPG*P-----PGSGAGDSEP 213
           PGA +RP  P     A PG P     PG G G + P
Sbjct: 422 PGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVP 457

 Score = 64.3 bits (155), Expect = 4e-09
 Identities = 75/216 (34%), Positives = 81/216 (36%), Gaps = 32/216 (14%)
 Frame = -2

Query: 764 GPDPPRSRALVVATARINSLP*TC--AAR*PGQPHRRCRPACGAGCA*WPPA-----SCP 606
           GP P RS A   A  R +  P  C  +AR PG P R  R   GA     PP      S P
Sbjct: 376 GPPPTRSGA---AAQRTHRRPPGCPRSARNPGCP-RTWRRRSGAQRGHPPPGAGQRPSGP 431

Query: 605 WGHQP*CAQP*RP-------------------PGPERLQACQ*PGTARSAAAWGQEPLLP 483
            G +P  A P  P                   P PER      P  A       QEP LP
Sbjct: 432 TGGRP--AAPGAPGTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAARLPPERQEPRLP 489

Query: 482 DHGPQAAPTRCPAAPAPEPQPSYPAWSAGRTPPPCPTPCAR-SCGRTKRRRHFQC*QRRP 306
                AA  RCPA P P  +    A    R PP CP       C RT RRR        P
Sbjct: 490 QD--LAAAQRCPAGPPPT-RSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGAQRGHPP 546

Query: 305 PGASRRPEAPPR*TAAEPG*P-----PGSGAGDSEP 213
           PGA +RP  P     A PG P     PG G G + P
Sbjct: 547 PGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVP 582

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 57/162 (35%), Positives = 61/162 (37%), Gaps = 6/162 (3%)
 Frame = -2

Query: 680 PGQPHRRCRPACGAGCA*WPPASCPWGHQP*CAQP*RPPGPERLQACQ*PGTARSAAAWG 501
           PG P     P  G G      A+ P G  P    P R  GP        P  A       
Sbjct: 189 PGAPGTPAAPGPGGG------AAVPSGATP---HPERGSGPAD------PPAAARLPPER 233

Query: 500 QEPLLPDHGPQAAPTRCPAAPAPEPQPSYPAWSAGRTPPPCPTPCAR-SCGRTKRRRHFQ 324
           QEP LP     AA  RCPA P P  +    A    R PP CP       C RT RRR   
Sbjct: 234 QEPRLPQD--LAAAQRCPAGPPPT-RSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGA 290

Query: 323 C*QRRPPGASRRPEAPPR*TAAEPG*P-----PGSGAGDSEP 213
                PPGA +RP  P     A PG P     PG G G + P
Sbjct: 291 QRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVP 332

 Score = 41.2 bits (95), Expect = 0.036
 Identities = 57/169 (33%), Positives = 61/169 (35%), Gaps = 27/169 (15%)
 Frame = -2

Query: 764 GPDPPRSRALVVATARINSLP*TC--AAR*PGQPHRRCRPACGAGCA*WPPA-----SCP 606
           GP P RS A   A  R +  P  C  +AR PG P R  R   GA     PP      S P
Sbjct: 501 GPPPTRSGA---AAQRTHRRPPGCPRSARNPGCP-RTWRRRSGAQRGHPPPGAGQRPSGP 556

Query: 605 WGHQP*CAQP*RP-------------------PGPERLQACQ*PGTARSAAAWGQEPLLP 483
            G +P  A P  P                   P PER      P  A       QEP LP
Sbjct: 557 TGGRP--AAPGAPGTPAAPGPGGGAAVPSGATPHPERGSGPADPPAAARLPPERQEPRLP 614

Query: 482 DHGPQAAPTRCPAAPAPEPQPSYPAWSAGRTPPPCPTPCAR-SCGRTKR 339
                AA  RCPA P P  +    A    R PP CP       C RT R
Sbjct: 615 QD--LAAAQRCPAGP-PPTRSGAAAQRTHRRPPGCPRSARNPGCPRTWR 660

 Score = 39.7 bits (91), Expect = 0.10
 Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 5/79 (6%)
 Frame = -2

Query: 434 PEPQPSYPAWSAGRTPPPCPTPCARSCGRTKRRRHFQC*QRRPPGASRRPEAPPR*TAAE 255
           P P P++    + R P          C RT RRR        PPGA +RP  P     A 
Sbjct: 138 PRPHPAFQVQWSARNP---------GCPRTWRRRSGAQRGHPPPGAGQRPSGPTGGRPAA 188

Query: 254 PG*P-----PGSGAGDSEP 213
           PG P     PG G G + P
Sbjct: 189 PGAPGTPAAPGPGGGAAVP 207

>ref|XP_321584.1| ENSANGP00000011587 [Anopheles gambiae] gi|21288546|gb|EAA00839.1|
           ENSANGP00000011587 [Anopheles gambiae str. PEST]
          Length = 410

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 45/148 (30%), Positives = 54/148 (36%), Gaps = 3/148 (2%)
 Frame = -2

Query: 644 GAGCA*WPPASCPWGHQP*CAQP*RPPGPERLQACQ*PGTARSAAAWGQEPLLPDHGPQA 465
           G G    PP   P G QP      +PP P        P        W Q        P  
Sbjct: 265 GPGAIPPPPLPPPLGVQP------QPPLPAAPMGIPPPPRMIPPPPWQQPGAPAPPAPVG 318

Query: 464 APTRCPAAPAPEPQPSYP---AWSAGRTPPPCPTPCARSCGRTKRRRHFQC*QRRPPGAS 294
           AP   P+AP P P PS+P   + + G+ PPP P P                 +  PPG  
Sbjct: 319 APPPAPSAPFPPPPPSFPPAGSAAGGQFPPPPPAPSTP--------------RPPPPGGV 364

Query: 293 RRPEAPPR*TAAEPG*PPGSGAGDSEPR 210
           R P+ PP   A  P  PP  G    +PR
Sbjct: 365 RPPQPPPPQMAGFPPRPPPGGGFPPQPR 392

>gb|AAA66445.1| unknown protein
          Length = 296

 Score = 55.8 bits (133), Expect = 1e-06
 Identities = 41/102 (40%), Positives = 44/102 (42%), Gaps = 6/102 (5%)
 Frame = -2

Query: 500 QEPLLPDHGPQAAPTRCPAAPAPEPQPSYPAWSAGRTPPPCPTPCAR-SCGRTKRRRHFQ 324
           QEP LP     AA  RCPA P P  +    A    R PP CP       C RT RRR   
Sbjct: 74  QEPRLPQD--LAAAQRCPAGPPPT-RSGAAAQRTHRRPPGCPRSARNPGCPRTWRRRSGA 130

Query: 323 C*QRRPPGASRRPEAPPR*TAAEPG*P-----PGSGAGDSEP 213
                PPGA +RP  P     A PG P     PG G G + P
Sbjct: 131 QRGHPPPGAGQRPSGPTGGRPAAPGAPGTPAAPGPGGGAAVP 172

>gb|AAC82365.1| unknown [Myxococcus xanthus]
          Length = 542

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 64/215 (29%), Positives = 77/215 (35%), Gaps = 1/215 (0%)
 Frame = -2

Query: 854 PLALARSATQPGAMACTAQPNPQA*TKPNHGPDPPRSRALVVATARINSLP*TCAAR*PG 675
           P    RS  +  A +  A+ NP     P+    PPR            S P  C    P 
Sbjct: 79  PTCARRSGRRCPAPSRHARRNPAG---PSRRCGPPRK-----------STPTRCCTPCPA 124

Query: 674 QPHRRCRPACGAGCA*WPPASCPWGHQP*CAQP*RPPGPERLQACQ*PGTARSAAAWGQE 495
            P  R RP+  A  A     +CP      CA    P G      C   G+A      G E
Sbjct: 125 PPRCRARPSAPAPSA---GRTCPTAGPSSCASGCCPTG-----RC---GSAPGPTPHGAE 173

Query: 494 PLLPDHGPQAAPTRCPAAPAPEPQPSYPAWSAGRTPPPCPTPCARSCGRTKRRRHFQC*Q 315
           P  P   P  AP          P+P+  A +AG T P C  P  R CGR        C +
Sbjct: 174 PSPPSQSPSPAPASSGGRRRTHPRPA-RASAAGATAPAC-LPPPRCCGRPGT----GCAR 227

Query: 314 RRPPGASRRPEAPPR*TAAEPG*PP-GSGAGDSEP 213
             PP  S     PPR     PG PP  SG+  + P
Sbjct: 228 TAPPSTSASHPPPPR----SPGTPPRASGSPAAAP 258

 Score = 42.7 bits (99), Expect = 0.012
 Identities = 61/215 (28%), Positives = 68/215 (31%), Gaps = 5/215 (2%)
 Frame = -2

Query: 854 PLALARSATQPGAMA----CTAQPNPQA*TKPNHGPDPPRSRALVVATARINSLP*TCAA 687
           P  L    T PGA        + P PQA   P     PPRS                   
Sbjct: 22  PPCLLSERTPPGARPPPTETASYPPPQAVPGPCAPRAPPRSPPP--------------RR 67

Query: 686 R*PGQPHRRCRPACGAGCA*WPPASCPWGHQP*CAQP*RPPGPERLQACQ*PGTARSAAA 507
           R  G  HR  RP C        PA      +        P GP R   C   G  R +  
Sbjct: 68  RHRGSRHRSFRPTCARRSGRRCPAPSRHARR-------NPAGPSR--RC---GPPRKST- 114

Query: 506 WGQEPLLPDHGPQAAPTRCPAAPAPEPQPSYPAWSAGRTPPPC-PTPCARSCGRTKRRRH 330
                      P    T CPA P    +PS PA SAGRT P   P+ CA  C  T R   
Sbjct: 115 -----------PTRCCTPCPAPPRCRARPSAPAPSAGRTCPTAGPSSCASGCCPTGR--- 160

Query: 329 FQC*QRRPPGASRRPEAPPR*TAAEPG*PPGSGAG 225
             C     P       +PP   +  P   P S  G
Sbjct: 161 --CGSAPGPTPHGAEPSPP---SQSPSPAPASSGG 190

 Score = 35.0 bits (79), Expect = 2.6
 Identities = 46/166 (27%), Positives = 53/166 (31%), Gaps = 31/166 (18%)
 Frame = -2

Query: 761 PDPPRSRALVVATARINSLP*TCAAR*PGQPHRRCRPACGAGCA*WPPASCPWGHQP*CA 582
           P PPR RA   A A   S   TC    P      C P    G A   P   P G +P  +
Sbjct: 123 PAPPRCRARPSAPAP--SAGRTCPTAGPSSCASGCCPTGRCGSA---PGPTPHGAEP--S 175

Query: 581 QP*RPPGPERLQA-----------------------------CQ*PGT--ARSAAAWGQE 495
            P + P P    +                             C  PGT  AR+A      
Sbjct: 176 PPSQSPSPAPASSGGRRRTHPRPARASAAGATAPACLPPPRCCGRPGTGCARTAPPSTSA 235

Query: 494 PLLPDHGPQAAPTRCPAAPAPEPQPSYPAWSAGRTPPPCPTPCARS 357
              P       P R   +PA  P P  PA    R PPP  TP  R+
Sbjct: 236 SHPPPPRSPGTPPRASGSPAAAPAPPSPAC---RPPPPGTTPAPRN 278

>gb|AAK53449.1| unknown [Streptomyces aureofaciens]
          Length = 579

 Score = 48.9 bits (115), Expect = 2e-04
 Identities = 69/246 (28%), Positives = 81/246 (32%), Gaps = 5/246 (2%)
 Frame = -2

Query: 926  PARSNIGQ----HTRAELIRNCACSFAVPLALARSATQPGAMACTAQPNPQA*TKPNHGP 759
            P RS  G+      R    R C  +   P   A  A      A +    PQ    P   P
Sbjct: 351  PRRSAPGRARRIRARGSRCRCCRGAGVEPEGPANGAGAGRPTATSGYARPQHARPPARAP 410

Query: 758  DPPRSRALVVATARINSLP*TCAAR*PGQPHRRCRPACGAGCA*WPPASCPWGHQP*CAQ 579
              PR      A  R  S P    +R    P R   P+        PP +      P  A+
Sbjct: 411  PGPRP-----APTRAASTPARTGSRPASPPTRPTAPSPAPAA---PPRAAA---APTPAR 459

Query: 578  P*RPPGPERLQACQ*PGTARSAAAWGQEPLLPDHGPQAAPTRCPAAPAPEPQPSYPAWSA 399
              RPP P        P   R  AA    P  P    + A TR PA+P   P P       
Sbjct: 460  --RPPPPPTPPV---PRARRGPAAGNGRP--PSTRDRTAGTRAPASPPGAPPPV----RR 508

Query: 398  GRTPPPCPTPCARSCGRTKRRRHFQC*QRRP-PGASRRPEAPPR*TAAEPG*PPGSGAGD 222
             R PPP   P      R    R     +  P P A+ RPE PPR      G  PG  +G 
Sbjct: 509  RRPPPPRAPPPHHPSARNPSARATPRPRPPPRPSAAARPEPPPRAAPGPSGTAPGPPSGP 568

Query: 221  SEPRKL 204
              P  L
Sbjct: 569  RSPSPL 574



EST assemble image


clone accession position
1 CL12f03_r AV393804 1 485
2 HCL061h12_r AV643002 87 567
3 MXL048h10_r BP095894 90 586
4 MXL070g02_r BP097139 92 463
5 HCL086g08_r AV644345 92 630
6 MXL007c10_r BP093356 93 553
7 CL75d06_r AV397078 93 578
8 HCL063a04_r AV643057 97 397
9 HCL025d08_r AV640961 97 586
10 HCL049f03_r AV642315 97 615
11 MXL043d09_r BP095535 97 509
12 HCL031d04_r AV641305 97 553
13 MXL069d11_r BP097065 97 497
14 HCL099c03_r AV645175 99 354
15 HCL060g10_r AV642934 101 587
16 MXL028d06_r BP094732 104 404
17 CL17f06_r AV394148 108 621
18 MXL053f02_r BP096148 114 510
19 HCL009e10_r AV640058 115 348
20 HCL026d08_r AV641023 117 575
21 HCL047h04_r AV642230 150 396
22 MXL039d10_r BP095289 179 624
23 MXL050b02_r BP095959 203 569
24 CL48b04_r AV395799 203 743
25 HCL013e04_r AV640273 267 553
26 CL34d01_r AV394903 435 952
27 LCL027b08_r AV627464 627 916
28 LCL095c10_r AV631510 686 1138




Chlamydomonas reinhardtii
Kazusa DNA Research Institute