Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000240A_C01 KCC000240A_c01
(697 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_190560.1| 60S ribosomal protein L26 (RPL26A) [Arabidopsis... 125 6e-30
dbj|BAB21209.1| putative ribosomal protein L26 [Oryza sativa (ja... 131 1e-29
ref|NP_201552.1| 60S ribosomal protein L26 (RPL26B) [Arabidopsis... 117 2e-27
sp|Q39411|RL26_BRARA 60S ribosomal protein L26 gi|2160300|dbj|BA... 112 1e-25
ref|XP_312471.1| ENSANGP00000022122 [Anopheles gambiae] gi|30177... 102 4e-25
>ref|NP_190560.1| 60S ribosomal protein L26 (RPL26A) [Arabidopsis thaliana]
gi|27735242|sp|P51414|R26A_ARATH 60S ribosomal protein
L26A gi|11276861|pir||T46057 60S RIBOSOMAL PROTEIN-like
- Arabidopsis thaliana gi|6723436|emb|CAB66929.1| 60S
RIBOSOMAL PROTEIN-like [Arabidopsis thaliana]
gi|13877791|gb|AAK43973.1|AF370158_1 putative 60S
ribosomal protein [Arabidopsis thaliana]
gi|16323426|gb|AAL15207.1| putative 60S ribosomal
protein [Arabidopsis thaliana]
gi|23397084|gb|AAN31827.1| putative 60S ribosomal
protein [Arabidopsis thaliana]
Length = 146
Score = 125 bits (314), Expect(2) = 6e-30
Identities = 69/117 (58%), Positives = 88/117 (74%), Gaps = 2/117 (1%)
Frame = +1
Query: 121 APLSAELKNKYWLSALCPFARTTRSRSPCGAFKAREGKVVEVYRKKWVIHIERVSKDKKN 300
+PLS +L+ KY + ++ P + + G +K REGKVV+VYR+KWVIHIER++++K N
Sbjct: 32 SPLSTDLRQKYNVRSM-PIRKDDEVQIVRGTYKGREGKVVQVYRRKWVIHIERITREKVN 90
Query: 301 GAVVNVGIDPSKVVITKLKLDKDRKALLERKKVAR-AAEKGKG-KFTEQDVAMTNVD 465
G VNVGI PSKVVITKL+LDKDRK+LLERK R AA+K KG KFT +DV M NVD
Sbjct: 91 GTTVNVGIQPSKVVITKLRLDKDRKSLLERKAKGRAAADKEKGTKFTSEDV-MQNVD 146
Score = 27.7 bits (60), Expect(2) = 6e-30
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 23 MKYNRNVSSSRRKSRK 70
MKYN V+SSRRK+RK
Sbjct: 1 MKYNPRVTSSRRKNRK 16
>dbj|BAB21209.1| putative ribosomal protein L26 [Oryza sativa (japonica
cultivar-group)]
Length = 157
Score = 131 bits (329), Expect = 1e-29
Identities = 64/110 (58%), Positives = 87/110 (78%)
Frame = +1
Query: 121 APLSAELKNKYWLSALCPFARTTRSRSPCGAFKAREGKVVEVYRKKWVIHIERVSKDKKN 300
A LS+EL++KY + ++ P + + G++K REGKVV+VYR++WVIH+ER++++K N
Sbjct: 32 AALSSELRHKYNVRSI-PIRKDDEVQVVRGSYKGREGKVVQVYRRRWVIHVERITREKVN 90
Query: 301 GAVVNVGIDPSKVVITKLKLDKDRKALLERKKVARAAEKGKGKFTEQDVA 450
G+ VNVGI PSKVV+TKLKLDKDRKA+L+RK RAA+K KGKFT DVA
Sbjct: 91 GSTVNVGIHPSKVVVTKLKLDKDRKAILDRKARGRAADKAKGKFTADDVA 140
>ref|NP_201552.1| 60S ribosomal protein L26 (RPL26B) [Arabidopsis thaliana]
gi|27734449|sp|Q9FJX2|R26B_ARATH 60S ribosomal protein
L26B gi|9757872|dbj|BAB08459.1| 60S ribosomal protein
L26 [Arabidopsis thaliana] gi|17473656|gb|AAL38285.1|
60S ribosomal protein L26 [Arabidopsis thaliana]
gi|20148599|gb|AAM10190.1| 60S ribosomal protein L26
[Arabidopsis thaliana] gi|21554514|gb|AAM63595.1| 60S
ribosomal protein L26 [Arabidopsis thaliana]
Length = 146
Score = 117 bits (293), Expect(2) = 2e-27
Identities = 64/117 (54%), Positives = 89/117 (75%), Gaps = 2/117 (1%)
Frame = +1
Query: 121 APLSAELKNKYWLSALCPFARTTRSRSPCGAFKAREGKVVEVYRKKWVIHIERVSKDKKN 300
+PLS +L+NK+ + ++ P + + G FK REGKV++VYR+KWVIHIER++++K N
Sbjct: 32 SPLSKDLRNKHNVRSM-PIRKDDEVQVVRGTFKGREGKVMQVYRRKWVIHIERITREKVN 90
Query: 301 GAVVNVGIDPSKVVITKLKLDKDRKALLERKKVAR-AAEKGKG-KFTEQDVAMTNVD 465
G+ VNVG++ S V+ITKL+LDKDRK+LLERK R AA+K KG KF+ +DV M NVD
Sbjct: 91 GSTVNVGVNASNVMITKLRLDKDRKSLLERKANGRAAADKEKGTKFSAEDV-MENVD 146
Score = 27.3 bits (59), Expect(2) = 2e-27
Identities = 12/16 (75%), Positives = 14/16 (87%)
Frame = +2
Query: 23 MKYNRNVSSSRRKSRK 70
MK+N VSSSRRK+RK
Sbjct: 1 MKFNPRVSSSRRKNRK 16
>sp|Q39411|RL26_BRARA 60S ribosomal protein L26 gi|2160300|dbj|BAA18941.1| ribosomal
protein [Brassica rapa]
Length = 146
Score = 112 bits (279), Expect(2) = 1e-25
Identities = 63/116 (54%), Positives = 84/116 (72%), Gaps = 2/116 (1%)
Frame = +1
Query: 121 APLSAELKNKYWLSALCPFARTTRSRSPCGAFKAREGKVVEVYRKKWVIHIERVSKDKKN 300
+PLS +L+ KY + ++ P + + G +K REGK+ +VYR+K VIHIER++++K N
Sbjct: 32 SPLSTDLRQKYNVRSM-PIRKDDEXQIVRGTYKGREGKLXQVYRRKXVIHIERLTREKVN 90
Query: 301 GAVVNVGIDPSKVVITKLKLDKDRKALLERKKVAR-AAEKGKG-KFTEQDVAMTNV 462
G VNVG+ P+KVVITKL+LDKDRK+LLERK R AA+K KG KFT DV M NV
Sbjct: 91 GTTVNVGVQPTKVVITKLRLDKDRKSLLERKAKGRAAADKDKGTKFTAVDV-MQNV 145
Score = 26.6 bits (57), Expect(2) = 1e-25
Identities = 11/16 (68%), Positives = 14/16 (86%)
Frame = +2
Query: 23 MKYNRNVSSSRRKSRK 70
MKYN V+SSRR++RK
Sbjct: 1 MKYNPRVTSSRRRNRK 16
>ref|XP_312471.1| ENSANGP00000022122 [Anopheles gambiae] gi|30177512|gb|EAA08173.2|
ENSANGP00000022122 [Anopheles gambiae str. PEST]
Length = 175
Score = 102 bits (255), Expect(2) = 4e-25
Identities = 57/121 (47%), Positives = 81/121 (66%), Gaps = 3/121 (2%)
Frame = +1
Query: 121 APLSAELKNKYWLSALCPFARTTRSRSPCGAFKARE-GKVVEVYRKKWVIHIERVSKDKK 297
APLS ELK KY + ++ P + + G +K + GKVV+VYRKK+V++IER+ ++K
Sbjct: 56 APLSKELKQKYNVRSM-PIRKDDEVQVVRGHYKGNQVGKVVQVYRKKYVVYIERIQREKA 114
Query: 298 NGAVVNVGIDPSKVVITKLKLDKDRKALLERKKVAR--AAEKGKGKFTEQDVAMTNVD*T 471
NG V VG+ PSK VI KLK+DKDRK +L+R+ R A K KGK+TE+ A T ++ T
Sbjct: 115 NGTNVYVGVHPSKCVIVKLKMDKDRKKILDRRAKGRLAALNKDKGKYTEESAAATAMETT 174
Query: 472 A 474
+
Sbjct: 175 S 175
Score = 34.3 bits (77), Expect(2) = 4e-25
Identities = 15/17 (88%), Positives = 17/17 (99%)
Frame = +2
Query: 20 KMKYNRNVSSSRRKSRK 70
KMK+N+NVSSSRRKSRK
Sbjct: 24 KMKFNKNVSSSRRKSRK 40
