KCC000237A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000237A_C01 KCC000237A_c01
cgaaaGAAGACACAATTTGTATAGAGCCTGCTCTATATCCTTTAGAGAGAGTCGGGGGCG
CGACAACATCGAGGTGTCCCCACGAAAGCAGCTTGCCGAGAGGCGCTTGACCGCCAACAT
GCTATCCATGCTCGGTCGTAAGGGCCAGGCCATGTGCCTGCGCTCCTCACGCCAGGTCCC
CTCGACGAGGGCCTCCATCGCTCGCCTTTTGGCGCAGACCCCTCGCCCGAATGTGCGCGC
CAACGCGCTGGCCGGCACCGCTCCTGGCACCTCCACCTCTGGCCCCGCTGAGCCTATTAA
GGACCCTATTCCTTATGCCAACCTTGTCGTCGGTGTCCCCCGCGAGAACGCCCCCGGCGA
GCGCCGCGTCGCGCTGAGCCCCGCCGCCGTGGCCGGCCTGCTGAAGCAGGGCTTCAAGAC
CATCGTTGTCGAGAAGGGCGCCGGCGAGTACTCCCAGTTTACGGACGCCGAGTACGCGAG
CGCCGGCGCCACGCTGGTGGACAGCACGGAGGCCATGGGCGCAGACATCGTGCTGCGCGT
GCGGCCGCCCGCGCTGGAGGAGGTCAACAAGATCAAGGAGGGCGCCGTCCTGGTGTCGTA
CCTGTACCCCGCCCGCAACAAGGAGCTGGTGGAGGCGCTGGCCAAGCGCCGCGCCACCGC
CATCGGCATGGACTGCATCCCGCGCACCATCTCGCGCGCGCAGATGTTTGACTCGCTGTC
CTCCATGGCCAACATCGCCGGATACCGCGCCGTCACCGAGGCCACCCAGCACTTTGAGCG
CTTCCTCAACGGCCAGATCACCGCCGCCGGCCGCATCCCGCCCGCCAAGGTCCTTGTCAT
CGGCGGCGGCGTGGCCGGCCTGGCGGCAGTGGGGGCTGCCAAGAGCCTGGGCGCCATCGT
GCGTGTGTTTGACACGCGCACGGCGGTGAAGGAGCAGGCCAAGTCCATGGGCGCCGAGTT
CCTCACCGTGGACATCCAGGAGGAGGGCGAGTCCGGCACCGGCTACTCCAAGGAGATGTC
CCCGGCCTTCATCGAGGCCGAGATGAAGCTGTTCGCGGCTCAGGCCAAGGAGGTGGACAT
CATCATCACCACCGCCCTCATCCCCGGCAAGGGCGCGCCGCTGCTGATCACCAAGGACAT
GGTGGACAGCATGAAGCCCGGCTCGGTGATTGTGGACCTGTCGGCGGAGGCGGGCGGCAA
CTGCGGCTACACCAAGCCCGGCGAGGTGGTCAAGACGCCCAACCGCGTCACCGTGGTGGG
ATACACCGACATGCCCAGCCGCATGGCCGGCCAGTCGTCCACCCTGTACGCCAACAACAT
CTCCAAGCTGCTGCTGTCCGCCGGCCCCTTCACCGGCGGCCCCAAGGGCCACTTCCGCAT
CGACCACGCTGACCCCGTCATCCGCGGCTCACTGGTGCTGGAGGACGGCGAGCTGCGCTG
GCCGCCGCCGCCCGGCGTCATCCCGCAGGCCAACACCAAGGTCAACGAGACCAAGGACCA
CAAGAAGGACACCGGCCCGGTGGACCTGTACGAGCCCACCAAGCGCAGCGCGCTGGTGAC
CACCGGCGCCGTGGCCGCCGCGCTGGCGCTGGGCGCCACCTCGCCCTCGGCCGCCTTCAG
CTCCATGCTCACCAAGTTCGGCCTGGCCTCCATCTGCGGCTACCAGACGGTGTGGGGCGT
GGTGCCGGCGCTGCACTCGCCGCTCATGTCGGTGACCAACGCCGTGTCGGGCCTGACGGC
GGTGGGCGGCATG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000237A_C01 KCC000237A_c01
         (1753 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_312859.1| ENSANGP00000016622 [Anopheles gambiae] gi|21296...   546  e-154
ref|XP_326633.1| hypothetical protein ( mitochondrial nicotinami...   511  e-143
emb|CAB88572.2| related to mitochondrial nicotinamide nucleotide...   505  e-141
pir||T48756 mitochondrial nicotinamide nucleotide transhydrogena...   503  e-141
ref|NP_776368.1| nicotinamide nucleotide transhydrogenase [Bos t...   498  e-139

>ref|XP_312859.1| ENSANGP00000016622 [Anopheles gambiae] gi|21296310|gb|EAA08455.1|
            ENSANGP00000016622 [Anopheles gambiae str. PEST]
          Length = 1076

 Score =  546 bits (1406), Expect = e-154
 Identities = 287/493 (58%), Positives = 362/493 (73%), Gaps = 3/493 (0%)
 Frame = +2

Query: 284  PAEPIKDPIPYANLVVGVPRENAPGERRVALSPAAVAGLLKQGFKTIVVEKGAGEYSQFT 463
            PA  +K  +PY NLV+GVP+E    E+RV+++P     L+K+GFK + VE GAG  ++F 
Sbjct: 51   PATAVKG-VPYQNLVIGVPKERWANEKRVSVTPVVAGTLVKKGFK-VQVESGAGLNAKFR 108

Query: 464  DAEYASAGATLVDSTEAMGADIVLRVRPPALEEVNKIKEGAVLVSYLYPARNKELVEALA 643
            DA+Y +AGA++VD  +A   DIVL+VR P   E+ ++++ + L+S+LYPA+NKEL++ LA
Sbjct: 109  DADYEAAGASIVDGRKAFETDIVLKVRQPIEPEIPQLRDASTLISFLYPAQNKELIDKLA 168

Query: 644  KRRATAIGMDCIPRTISRAQMFDSLSSMANIAGYRAVTEATQHFERFLNGQITAAGRIPP 823
            +R+  A  MD IPR ISRAQ+FD+LSSMANI+GYRAV EA  HF RF  GQITAAG++PP
Sbjct: 169  QRKINAFAMDAIPR-ISRAQVFDALSSMANISGYRAVIEAANHFPRFFTGQITAAGKVPP 227

Query: 824  AKVLVIGGGVAGLAAVGAAKSLGAIVRVFDTRTAVKEQAKSMGAEFLTVDIQEEGESGTG 1003
            AK+LVIGGGVAGLAA+G A+ +GAIVR FDTR  VKEQ +SMGAEFLT++I E+G +  G
Sbjct: 228  AKILVIGGGVAGLAAIGQARGMGAIVRAFDTRPVVKEQVESMGAEFLTINISEDGSTAGG 287

Query: 1004 YSKEMSPAFIEAEMKLFAAQAKEVDIIITTALIPGKGAPLLITKDMVDSMKPGSVIVDLS 1183
            YSKEMS  FIEAEM LFA Q KEVD+IITTALIPGK APLLIT++MV SMKPGSVIVDL+
Sbjct: 288  YSKEMSKEFIEAEMALFAKQCKEVDVIITTALIPGKKAPLLITEEMVKSMKPGSVIVDLA 347

Query: 1184 AEAGGNCGYTKPGEVVKTPNRVTVVGYTDMPSRMAGQSSTLYANNISKLLLSAGPFTGGP 1363
            AE GGN   T PGE +K  + V  VG TD PSR+  QSSTLYANNISK LLS      G 
Sbjct: 348  AETGGNVQTTVPGE-IKVVHDVVHVGLTDFPSRLPTQSSTLYANNISKFLLSM-----GE 401

Query: 1364 KGHFRIDHADPVIRGSLVLEDGELRWPP---PPGVIPQANTKVNETKDHKKDTGPVDLYE 1534
            K HF I+  D V+RGS+VL+ G L WPP   P    P      ++    K +  P D ++
Sbjct: 402  KDHFHINPEDEVVRGSMVLQGGNLMWPPPVIPVSAKPPPAVAASKPAAIKAEALPADPFK 461

Query: 1535 PTKRSALVTTGAVAAALALGATSPSAAFSSMLTKFGLASICGYQTVWGVVPALHSPLMSV 1714
             T RS+L+ TG +   L LGA +P+AAF++M+T F ++ I GY TVWGV PALHSPLMSV
Sbjct: 462  ETLRSSLMYTGGLGTLLGLGAVAPNAAFTTMMTTFAMSGIVGYHTVWGVTPALHSPLMSV 521

Query: 1715 TNAVSGLTAVGGM 1753
            TNA+SG+TAVGG+
Sbjct: 522  TNAISGITAVGGL 534

>ref|XP_326633.1| hypothetical protein ( mitochondrial nicotinamide nucleotide
            transhydrogenase-related protein [imported] - Neurospora
            crassa ) gi|28922584|gb|EAA31811.1| hypothetical protein
            ( mitochondrial nicotinamide nucleotide
            transhydrogenase-related protein [imported] - Neurospora
            crassa )
          Length = 1070

 Score =  511 bits (1316), Expect = e-143
 Identities = 283/536 (52%), Positives = 366/536 (67%), Gaps = 2/536 (0%)
 Frame = +2

Query: 152  MCLRSSRQVPSTRASIARLLAQTPRPNVRANALAGTAPGTSTSGPAEPIKDPIPYANLVV 331
            + L +S  +      IARLLA   +     N + G++  T ++G   P+   +PY  L V
Sbjct: 11   LVLNASTSLSPGSRIIARLLALPTK-----NTIPGSS-ATYSTGATAPVPPTVPYKQLTV 64

Query: 332  GVPRENAPGERRVALSPAAVAGLLKQGFKTIVVEKGAGEYSQFTDAEYASAGATLVDSTE 511
            GVPRE  P ERRVAL+P  VA LLK+GF  ++VEKGAG  ++F D+ YA+AGATLV+S  
Sbjct: 65   GVPRETYPNERRVALTPQNVAFLLKKGFGKVLVEKGAGAEAEFHDSAYATAGATLVESAS 124

Query: 512  AM--GADIVLRVRPPALEEVNKIKEGAVLVSYLYPARNKELVEALAKRRATAIGMDCIPR 685
             +   ADIVL+VR P++ E   +KEG  ++S+L PA+NK LVE LA R AT   MD IPR
Sbjct: 125  DVWNNADIVLKVRGPSVAEAEMLKEGQTIISFLQPAQNKPLVEKLASRNATVFAMDMIPR 184

Query: 686  TISRAQMFDSLSSMANIAGYRAVTEATQHFERFLNGQITAAGRIPPAKVLVIGGGVAGLA 865
             ISRAQ+FD+LSSMANIAGY+AV EA+  F RFL GQ+TAAG+IPP KVLVIG GVAGL+
Sbjct: 185  -ISRAQVFDALSSMANIAGYKAVLEASNVFGRFLTGQVTAAGKIPPCKVLVIGAGVAGLS 243

Query: 866  AVGAAKSLGAIVRVFDTRTAVKEQAKSMGAEFLTVDIQEEGESGTGYSKEMSPAFIEAEM 1045
            A+  A+ +GAIVR FDTR+A +EQ +S+GAEF+ V++QE+G    GY+KEMSP FI AEM
Sbjct: 244  AIATARRMGAIVRGFDTRSAAREQVQSLGAEFIEVELQEDGSGAGGYAKEMSPEFIAAEM 303

Query: 1046 KLFAAQAKEVDIIITTALIPGKGAPLLITKDMVDSMKPGSVIVDLSAEAGGNCGYTKPGE 1225
            KLF  QA+EVD+IITTALIPGK AP LITK MV+ MKPGSVIVDL+AEAGGNC  T+PG+
Sbjct: 304  KLFTEQAQEVDMIITTALIPGKPAPKLITKAMVEIMKPGSVIVDLAAEAGGNCEVTQPGK 363

Query: 1226 VVKTPNRVTVVGYTDMPSRMAGQSSTLYANNISKLLLSAGPFTGGPKGHFRIDHADPVIR 1405
            ++   + V ++GYTD+PSR+  QSSTLY+NNI+K LLS  P        + ID  D V+R
Sbjct: 364  LINYKD-VKIIGYTDLPSRLPTQSSTLYSNNITKFLLSMAP----NNQEYGIDLQDEVVR 418

Query: 1406 GSLVLEDGELRWPPPPGVIPQANTKVNETKDHKKDTGPVDLYEPTKRSALVTTGAVAAAL 1585
            G++V+  G +  PP P   P        T   + +   +  ++   R   + T  + AAL
Sbjct: 419  GAIVINKGNI-LPPAPRPAPPPAPAATPTTAKEAEVVALTPFQKASREVGLVTSGMGAAL 477

Query: 1586 ALGATSPSAAFSSMLTKFGLASICGYQTVWGVVPALHSPLMSVTNAVSGLTAVGGM 1753
            ALG  +      +  T F LAS+ GY+ VWGV PALHSPLMSVTNA+SG+  VGG+
Sbjct: 478  ALGKLTGPLFMGNAFT-FALASLIGYRVVWGVQPALHSPLMSVTNAISGMVGVGGL 532

>emb|CAB88572.2| related to mitochondrial nicotinamide nucleotide transhydrogenase
            [Neurospora crassa]
          Length = 1062

 Score =  505 bits (1300), Expect = e-141
 Identities = 278/524 (53%), Positives = 355/524 (67%), Gaps = 14/524 (2%)
 Frame = +2

Query: 224  RPNVRANALAGTAPG---------TSTSGPAEPIKDPIPYANLVVGVPRENAPGERRVAL 376
            RP +  NA    +PG         T ++G   P+   +PY  L VGVPRE  P ERRVAL
Sbjct: 8    RPTLVLNASTSLSPGSRIIARLLATYSTGATAPVPPTVPYKQLTVGVPRETYPNERRVAL 67

Query: 377  SPAAVAGLLKQGFKTIVVEKGAGEYSQFTDAEYASAGATLVDSTEAM--GADIVLRVRPP 550
            +P  VA LLK+GF  ++VEKGAG  ++F D+ YA+AGATLV+S   +   ADIVL+VR P
Sbjct: 68   TPQNVAFLLKKGFGKVLVEKGAGAEAEFHDSAYATAGATLVESASDVWNNADIVLKVRGP 127

Query: 551  ALEEVNKIKEGAVLVSYLYPARNKELVEALAKRRATAIGMDCIPRTISRAQMFDSLSSMA 730
            ++ E   +KEG  ++S+L PA+NK LVE LA R AT   MD IPR ISRAQ+FD+LSSMA
Sbjct: 128  SVAEAEMLKEGQTIISFLQPAQNKPLVEKLASRNATVFAMDMIPR-ISRAQVFDALSSMA 186

Query: 731  NIAGYRAVTEATQHFERFLNGQITAAGRIPPAKVLVIGGGVAGLAAVGAAKSLGAIVRVF 910
            NIAGY+AV EA+  F RFL GQ+TAAG+IPP KVLVIG GVAGL+A+  A+ +GAIVR F
Sbjct: 187  NIAGYKAVLEASNVFGRFLTGQVTAAGKIPPCKVLVIGAGVAGLSAIATARRMGAIVRGF 246

Query: 911  DTRTAVKEQAKSMGAEFLTVDIQEEGESGTGYSKEMSPAFIEAEMKLFAAQAKEVDIIIT 1090
            DTR+A +EQ +S+GAEF+ V++QE+G    GY+KEMSP FI AEMKLF  QA+EVD+IIT
Sbjct: 247  DTRSAAREQVQSLGAEFIEVELQEDGSGAGGYAKEMSPEFIAAEMKLFTEQAQEVDMIIT 306

Query: 1091 TALIPGKGAPLLITKDMVDSMKPGSVIVDLSAEAGGNCGYTKPGEVVKTPNRVTV---VG 1261
            TALIPGK AP LITK MV+ MKPGSVIVDL+AEAGGNC  T+PG+++   +   +    G
Sbjct: 307  TALIPGKPAPKLITKAMVEIMKPGSVIVDLAAEAGGNCEVTQPGKLINYKDVKIIGEKTG 366

Query: 1262 YTDMPSRMAGQSSTLYANNISKLLLSAGPFTGGPKGHFRIDHADPVIRGSLVLEDGELRW 1441
            YTD+PSR+  QSSTLY+NNI+K LLS  P        + ID  D V+RG++V+  G +  
Sbjct: 367  YTDLPSRLPTQSSTLYSNNITKFLLSMAP----NNQEYGIDLQDEVVRGAIVINKGNI-L 421

Query: 1442 PPPPGVIPQANTKVNETKDHKKDTGPVDLYEPTKRSALVTTGAVAAALALGATSPSAAFS 1621
            PP P   P        T   + +   +  ++   R   + T  + AALALG  +      
Sbjct: 422  PPAPRPAPPPAPAATPTTAKEAEVVALTPFQKASREVGLVTSGMGAALALGKLTGPLFMG 481

Query: 1622 SMLTKFGLASICGYQTVWGVVPALHSPLMSVTNAVSGLTAVGGM 1753
            +  T F LAS+ GY+ VWGV PALHSPLMSVTNA+SG+  VGG+
Sbjct: 482  NAFT-FALASLIGYRVVWGVQPALHSPLMSVTNAISGMVGVGGL 524

>pir||T48756 mitochondrial nicotinamide nucleotide transhydrogenase-related
            protein [imported] - Neurospora crassa
          Length = 1068

 Score =  503 bits (1294), Expect = e-141
 Identities = 278/530 (52%), Positives = 355/530 (66%), Gaps = 20/530 (3%)
 Frame = +2

Query: 224  RPNVRANALAGTAPG---------------TSTSGPAEPIKDPIPYANLVVGVPRENAPG 358
            RP +  NA    +PG               T ++G   P+   +PY  L VGVPRE  P 
Sbjct: 8    RPTLVLNASTSLSPGSRIIARLLGESTSWTTYSTGATAPVPPTVPYKQLTVGVPRETYPN 67

Query: 359  ERRVALSPAAVAGLLKQGFKTIVVEKGAGEYSQFTDAEYASAGATLVDSTEAM--GADIV 532
            ERRVAL+P  VA LLK+GF  ++VEKGAG  ++F D+ YA+AGATLV+S   +   ADIV
Sbjct: 68   ERRVALTPQNVAFLLKKGFGKVLVEKGAGAEAEFHDSAYATAGATLVESASDVWNNADIV 127

Query: 533  LRVRPPALEEVNKIKEGAVLVSYLYPARNKELVEALAKRRATAIGMDCIPRTISRAQMFD 712
            L+VR P++ E   +KEG  ++S+L PA+NK LVE LA R AT   MD IPR ISRAQ+FD
Sbjct: 128  LKVRGPSVAEAEMLKEGQTIISFLQPAQNKPLVEKLASRNATVFAMDMIPR-ISRAQVFD 186

Query: 713  SLSSMANIAGYRAVTEATQHFERFLNGQITAAGRIPPAKVLVIGGGVAGLAAVGAAKSLG 892
            +LSSMANIAGY+AV EA+  F RFL GQ+TAAG+IPP KVLVIG GVAGL+A+  A+ +G
Sbjct: 187  ALSSMANIAGYKAVLEASNVFGRFLTGQVTAAGKIPPCKVLVIGAGVAGLSAIATARRMG 246

Query: 893  AIVRVFDTRTAVKEQAKSMGAEFLTVDIQEEGESGTGYSKEMSPAFIEAEMKLFAAQAKE 1072
            AIVR FDTR+A +EQ +S+GAEF+ V++QE+G    GY+KEMSP FI AEMKLF  QA+E
Sbjct: 247  AIVRGFDTRSAAREQVQSLGAEFIEVELQEDGSGAGGYAKEMSPEFIAAEMKLFTEQAQE 306

Query: 1073 VDIIITTALIPGKGAPLLITKDMVDSMKPGSVIVDLSAEAGGNCGYTKPGEVVKTPNRVT 1252
            VD+IITTALIPGK AP LITK MV+ MKPGSVIVDL+AEAGGNC  T+PG+++   +   
Sbjct: 307  VDMIITTALIPGKPAPKLITKAMVEIMKPGSVIVDLAAEAGGNCEVTQPGKLINYKDVKI 366

Query: 1253 V---VGYTDMPSRMAGQSSTLYANNISKLLLSAGPFTGGPKGHFRIDHADPVIRGSLVLE 1423
            +    GYTD+PSR+  QSSTLY+NNI+K LLS  P        + ID  D V+RG++V+ 
Sbjct: 367  IGEKTGYTDLPSRLPTQSSTLYSNNITKFLLSMAP----NNQEYGIDLQDEVVRGAIVIN 422

Query: 1424 DGELRWPPPPGVIPQANTKVNETKDHKKDTGPVDLYEPTKRSALVTTGAVAAALALGATS 1603
             G +  PP P   P        T   + +   +  ++   R   + T  + AALALG  +
Sbjct: 423  KGNI-LPPAPRPAPPPAPAATPTTAKEAEVVALTPFQKASREVGLVTSGMGAALALGKLT 481

Query: 1604 PSAAFSSMLTKFGLASICGYQTVWGVVPALHSPLMSVTNAVSGLTAVGGM 1753
                  +  T F LAS+ GY+ VWGV PALHSPLMSVTNA+SG+  VGG+
Sbjct: 482  GPLFMGNAFT-FALASLIGYRVVWGVQPALHSPLMSVTNAISGMVGVGGL 530

>ref|NP_776368.1| nicotinamide nucleotide transhydrogenase [Bos taurus]
            gi|163410|gb|AAA30660.1| nicotinamide nucleotide
            transhydrogenase
          Length = 1086

 Score =  498 bits (1283), Expect = e-139
 Identities = 275/502 (54%), Positives = 350/502 (68%), Gaps = 15/502 (2%)
 Frame = +2

Query: 293  PIKDPIPYANLVVGVPRENAPGERRVALSPAAVAGLLKQGFKTIVVEKGAGEYSQFTDAE 472
            P+K  IPY  L VGVP+E    E+RVALSPA V  L+KQGF  +VVE GAGE S+F+D  
Sbjct: 47   PVKPGIPYKQLTVGVPKEIFQNEKRVALSPAGVQALVKQGFN-VVVESGAGEASKFSDDH 105

Query: 473  YASAGATLVDSTEAMGADIVLRVRPPALE------EVNKIKEGAVLVSYLYPARNKELVE 634
            Y +AGA +  + E + +D+V++VR P L       E + +K    L+S++YPA+N +L+ 
Sbjct: 106  YRAAGAQIQGAKEVLASDLVVKVRAPMLNPTLGVHEADLLKTSGTLISFIYPAQNPDLLN 165

Query: 635  ALAKRRATAIGMDCIPRTISRAQMFDSLSSMANIAGYRAVTEATQHFERFLNGQITAAGR 814
             L+KR+ T + MD +PR ++ AQ +D+LSSMANIAGY+AV  A  HF RF  GQITAAG+
Sbjct: 166  KLSKRKTTVLAMDQVPR-VTIAQGYDALSSMANIAGYKAVVLAANHFGRFFTGQITAAGK 224

Query: 815  IPPAKVLVIGGGVAGLAAVGAAKSLGAIVRVFDTRTAVKEQAKSMGAEFLTVDIQEEGES 994
            +PPAK+L++GGGVAGLA+ GAAKS+GAIVR FDTR A  EQ KS+GAE L VD++E GE 
Sbjct: 225  VPPAKILIVGGGVAGLASAGAAKSMGAIVRGFDTRAAALEQFKSLGAEPLEVDLKESGEG 284

Query: 995  GTGYSKEMSPAFIEAEMKLFAAQAKEVDIIITTALIPGKGAPLLITKDMVDSMKPGSVIV 1174
              GY+KEMS  FIEAEMKLFA Q KEVDI+I+TALIPGK AP+L  K+M++SMK GSV+V
Sbjct: 285  QGGYAKEMSKEFIEAEMKLFAQQCKEVDILISTALIPGKKAPILFNKEMIESMKEGSVVV 344

Query: 1175 DLSAEAGGNCGYTKPGEVVKTPNRVTVVGYTDMPSRMAGQSSTLYANNISKLLLSAGP-- 1348
            DL+AEAGGN   TKPGE+      +T +GYTD+PSRMA Q+STLY+NNI+KLL +  P  
Sbjct: 345  DLAAEAGGNFETTKPGELY-VHKGITHIGYTDLPSRMATQASTLYSNNITKLLKAISPDK 403

Query: 1349 --FTGGPKGHFRIDHADPVIRGSLVLEDGELRWP-PPPGVIPQA----NTKVNETKDHKK 1507
              F    K  F       VIRG++V++DG++ +P P P  IPQ        V E +  K 
Sbjct: 404  DNFYFEVKDDFDFGTMGHVIRGTVVMKDGQVIFPAPTPKNIPQGAPVKQKTVAELEAEKA 463

Query: 1508 DTGPVDLYEPTKRSALVTTGAVAAALALGATSPSAAFSSMLTKFGLASICGYQTVWGVVP 1687
             T  +  +  T  SA V T  +   L LG  +P+ AFS M+T FGLA I GY TVWGV P
Sbjct: 464  AT--ITPFRKTMTSASVYTAGLTGILGLGIAAPNLAFSQMVTTFGLAGIVGYHTVWGVTP 521

Query: 1688 ALHSPLMSVTNAVSGLTAVGGM 1753
            ALHSPLMSVTNA+SGLTAVGG+
Sbjct: 522  ALHSPLMSVTNAISGLTAVGGL 543



EST assemble image


clone accession position
1 LCL049c04_r AV628938 1 255
2 CL62b08_r AV396405 6 524
3 CL32a02_r AV394827 8 547
4 HCL080g02_r AV644039 11 470
5 MXL086a11_r BP098052 11 341
6 CL60e05_r AV396380 14 465
7 CL69d05_r AV396794 17 542
8 HCL090a07_r AV644523 18 391
9 HCL072e06_r AV643599 19 525
10 HCL042b01_r AV641897 19 497
11 CL76c04_r AV397116 20 553
12 CL76f05_r AV397132 22 501
13 HCL079h04_r AV643998 61 538
14 HCL034a11_r AV641463 108 455
15 HCL032g02_r AV641387 183 718
16 MXL050a03_r BP095954 291 792
17 MXL050c03_r BP095966 313 726
18 HCL075e04_r AV643758 474 921
19 MXL063a07_r BP096683 562 973
20 LCL058c01_r AV629407 603 1033
21 HCL090h10_r AV644586 712 1071
22 HCL036e03_r AV641570 712 1132
23 CL60e07_r AV396353 722 1253
24 HCL016g07_r AV640465 794 1289
25 MXL081a01_r BP097763 879 1262
26 MXL017h04_r BP094080 897 1221
27 MXL055d02_r BP096251 927 1325
28 CL75g02_r AV397073 1091 1574
29 CL12e04_r AV393847 1092 1607
30 LCL069d02_r AV629932 1109 1417
31 CL31h08_r AV395004 1128 1611
32 LCL010h07_r AV626542 1198 1403
33 HCL025f09_r AV640979 1254 1715
34 LCL039e06_r AV628280 1267 1745
35 HCL018c09_r AV640559 1276 1769
36 LCL042a12_r AV628449 1337 1695
37 CL24g05_r AV394415 1349 1754




Chlamydomonas reinhardtii
Kazusa DNA Research Institute