Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000236A_C01 KCC000236A_c01
(616 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_620192.1| POU domain, class 3, transcription factor 3 [Ra... 32 0.009
ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) ... 42 0.009
ref|NP_114171.1| haspin [Homo sapiens] gi|13561416|gb|AAK30300.1... 41 0.012
dbj|BAB71255.1| unnamed protein product [Homo sapiens] 41 0.012
gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays] 41 0.016
>ref|NP_620192.1| POU domain, class 3, transcription factor 3 [Rattus norvegicus]
gi|5915802|sp|Q63262|PO33_RAT POU domain, class 3,
transcription factor 3 (Brain-specific homeobox/POU
domain protein 1) (Brain-1) (Brn-1 protein)
gi|2760445|emb|CAA04893.1| Brain-1 (Brn-1) protein
[Rattus norvegicus]
Length = 497
Score = 32.3 bits (72), Expect(2) = 0.009
Identities = 11/24 (45%), Positives = 15/24 (61%)
Frame = -2
Query: 501 PWCAAVQGSSCAASEPPRPPLPPP 430
PW + G + + +PPRPP PPP
Sbjct: 120 PWSGSAVGMAGSPQQPPRPPPPPP 143
Score = 28.5 bits (62), Expect(2) = 0.009
Identities = 16/48 (33%), Positives = 25/48 (51%), Gaps = 2/48 (4%)
Frame = -2
Query: 456 PPR--PPLPPPHVGLLSSAGFSAS*SSSECSSPAWSERLSWAAGEAAP 319
PP PP PPPH G G +A+ +++ ++ A + S A G+ P
Sbjct: 168 PPHLGPPPPPPHQGHPGGWGAAAAAAAAAAAAAAAAHLPSMAGGQQPP 215
>ref|NP_492875.2| pre-mRNA splicing SR protein related (68.2 kD) (rsr-1)
[Caenorhabditis elegans] gi|19571645|emb|CAB04214.3| C.
elegans RSR-1 protein (corresponding sequence F28D9.1)
[Caenorhabditis elegans]
Length = 601
Score = 41.6 bits (96), Expect = 0.009
Identities = 38/143 (26%), Positives = 59/143 (40%)
Frame = -3
Query: 602 PPAPPQAASCPEMTASAPRP*FACFRTPGAVA*GRGAQRSRAAAVRLASHPDRRCLLRT* 423
PPAP +A S + + R + ++P A R +SR+ A + P RR
Sbjct: 358 PPAPKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPARR------ 411
Query: 422 ACSAVRASPPAEAAASARRRPGAND*AGLRERRRPPCRNGRSPSQRAWRAMCRAGVSVQR 243
R SP A + A +R + + RRR +SP+ R R+ ++ + +R
Sbjct: 412 -----RRSPSASKSPPAPKRAKSRSKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRR 466
Query: 242 RRPVHGSWLHFPARSSKLCSTPR 174
RR GS P R + PR
Sbjct: 467 RRSPSGSKSRSPRRRRSPAAAPR 489
>ref|NP_114171.1| haspin [Homo sapiens] gi|13561416|gb|AAK30300.1|AF289865_1 haploid
germ cell-specific nuclear protein kinase [Homo sapiens]
Length = 798
Score = 41.2 bits (95), Expect = 0.012
Identities = 43/138 (31%), Positives = 53/138 (38%), Gaps = 8/138 (5%)
Frame = -3
Query: 566 MTASAPRP*FACFRTPGAVA*GRGAQRSRAAAVRLASHPDRRCLLRT*ACSAVRASPPAE 387
M AS P P FRT GA A GR +R A + DRR + S P++
Sbjct: 1 MAASLPGPGSRLFRTYGA-ADGRRQRRPGREAAQWFPPQDRRRFFNSSGSSDASIGDPSQ 59
Query: 386 AAASARRRPGAND*AGLRERRRPPCRNGRSPSQR--------AWRAMCRAGVSVQRRRPV 231
+ P D G RRR C GR P R W+ R ++V RR
Sbjct: 60 --SDDPDDPDDPDFPGSPVRRRRRCPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPRR-- 115
Query: 230 HGSWLHFPARSSKLCSTP 177
L AR + CSTP
Sbjct: 116 ----LGLRARPPQKCSTP 129
>dbj|BAB71255.1| unnamed protein product [Homo sapiens]
Length = 314
Score = 41.2 bits (95), Expect = 0.012
Identities = 43/138 (31%), Positives = 53/138 (38%), Gaps = 8/138 (5%)
Frame = -3
Query: 566 MTASAPRP*FACFRTPGAVA*GRGAQRSRAAAVRLASHPDRRCLLRT*ACSAVRASPPAE 387
M AS P P FRT GA A GR +R A + DRR + S P++
Sbjct: 1 MAASLPGPGSRLFRTYGA-ADGRRQRRPGREAAQWFPPQDRRRFFNSSGSSDASIGDPSQ 59
Query: 386 AAASARRRPGAND*AGLRERRRPPCRNGRSPSQR--------AWRAMCRAGVSVQRRRPV 231
+ P D G RRR C GR P R W+ R ++V RR
Sbjct: 60 --SDDPDDPDDPDFPGSPVRRRRRCPGGRVPKDRPSLTVTPKRWKLRARPSLTVTPRR-- 115
Query: 230 HGSWLHFPARSSKLCSTP 177
L AR + CSTP
Sbjct: 116 ----LGLRARPPQKCSTP 129
>gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]
Length = 274
Score = 40.8 bits (94), Expect = 0.016
Identities = 42/141 (29%), Positives = 52/141 (36%)
Frame = +3
Query: 162 PAGDSRSTAQL*ASCWKVEPATVHRPPSLHGHSGPAHSPPGPLRWAPPIPAWWAPPLPQP 341
P G + STA +S W P R P+ G P P P AP A P
Sbjct: 77 PRGTTTSTAW--SSPWTASPCASCREPTPRGRPAPCRRCPSP---AP------ARPTACS 125
Query: 342 SSVVRSRPATSTRCCFSWRRSPHC*ASLRAEEAAAVWVAR*PHSCCPGPLRTTASRHCTW 521
S P+ T C S RRSP C + TTASR TW
Sbjct: 126 SRSTAGSPSGPTPCP-SQRRSPGCTGTASRP--------------------TTASRTLTW 164
Query: 522 RAKTSKSRPWSRCCHFWTARR 584
+ +++S P C W+ARR
Sbjct: 165 PSSSARSPP---TCTAWSARR 182
