Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000226A_C01 KCC000226A_c01
(567 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||S60158 chlamyopsin - Chlamydomonas reinhardtii gi|1122270|e... 74 2e-12
ref|XP_117294.3| similar to CDNA sequence BC026799 [Homo sapiens] 37 0.14
ref|NP_862423.1| proline-rich extensin-like protein [Micrococcus... 35 0.55
ref|NP_887335.1| putative exported protein [Bordetella bronchise... 35 0.55
ref|NP_218986.1| penicillin tolerance protein (lytB) [Treponema ... 35 0.55
>pir||S60158 chlamyopsin - Chlamydomonas reinhardtii gi|1122270|emb|CAA88832.1|
chlamyopsin [Chlamydomonas reinhardtii]
gi|4467383|emb|CAB37649.1| chlamyopsin [Chlamydomonas
reinhardtii] gi|1586088|prf||2203264A chlamyrhodopsin
Length = 235
Score = 73.6 bits (179), Expect = 2e-12
Identities = 38/51 (74%), Positives = 41/51 (79%), Gaps = 3/51 (5%)
Frame = +3
Query: 243 KKPNLPSLLPLLPRGL---ALSGPMGVWIWRVKPLPAIPGKGAAPTTLVQA 386
KK +L S + + R L ALSGPMGVWIWRVKPLPAIPGKGAAPTTLVQA
Sbjct: 185 KKVSLKSTVGIKARDLKIVALSGPMGVWIWRVKPLPAIPGKGAAPTTLVQA 235
>ref|XP_117294.3| similar to CDNA sequence BC026799 [Homo sapiens]
Length = 286
Score = 37.4 bits (85), Expect = 0.14
Identities = 27/82 (32%), Positives = 32/82 (38%)
Frame = +1
Query: 40 AAPPPRVGRF*RTSSGPACDGAGACAQRGCAAATPRGLIEASHGGGCVGLDVSSVFQWCE 219
AAP P G S G C G GA A G + A GG + VF + E
Sbjct: 2 AAPAPGAGA---ASGGAGCSGGGAGAGAGSGSGA------AGAGGRLPSRVLELVFSYLE 52
Query: 220 LHAEELCRRSRTCLHYYRCCRG 285
L C + C H+YRC G
Sbjct: 53 LSELRSC--ALVCKHWYRCLHG 72
>ref|NP_862423.1| proline-rich extensin-like protein [Micrococcus sp. 28]
gi|18025411|gb|AAK62519.1| proline-rich extensin-like
protein [Micrococcus sp. 28]
Length = 406
Score = 35.4 bits (80), Expect = 0.55
Identities = 24/61 (39%), Positives = 28/61 (45%)
Frame = -2
Query: 185 PTHPPPWLASMRPRGVAAAQPRCAHAPAPSQAGPDDVRQKRPTRGGGAAPLRCSCCTPPR 6
P PPP A++ P AA R A A AP+ A P R P AAP + PPR
Sbjct: 299 PAAPPPPAAALPPPP-AAPPARAAPAAAPAPAPPVPARMAAPAAMPRAAPATPAPENPPR 357
Query: 5 P 3
P
Sbjct: 358 P 358
>ref|NP_887335.1| putative exported protein [Bordetella bronchiseptica]
gi|33567372|emb|CAE31285.1| putative exported protein
[Bordetella bronchiseptica]
Length = 199
Score = 35.4 bits (80), Expect = 0.55
Identities = 16/34 (47%), Positives = 21/34 (61%)
Frame = -2
Query: 197 DTSSPTHPPPWLASMRPRGVAAAQPRCAHAPAPS 96
+ ++ + PPPW A R R AA+P A APAPS
Sbjct: 54 EPAAASAPPPWAAGNRARPAPAARPAPAAAPAPS 87
>ref|NP_218986.1| penicillin tolerance protein (lytB) [Treponema pallidum subsp.
pallidum str. Nichols] gi|8928181|sp|O83558|ISPH_TREPA
4-hydroxy-3-methylbut-2-enyl diphosphate reductase
gi|7521289|pir||G71310 probable penicillin tolerance
protein (lytB) - syphilis spirochete
gi|3322840|gb|AAC65533.1| penicillin tolerance protein
(lytB) [Treponema pallidum subsp. pallidum str. Nichols]
Length = 376
Score = 35.4 bits (80), Expect = 0.55
Identities = 26/82 (31%), Positives = 35/82 (41%), Gaps = 9/82 (10%)
Frame = -2
Query: 254 VRLLLHNSSACSSHHWKTLDTSSP-THPPPWLASMRPRGVAAAQPR----CAHAPAPSQA 90
VR+ + + +HH ++ T P H P LA +R RG+ P HAPA A
Sbjct: 22 VRMAVRMAEHARAHHRGSVYTLGPLVHNPVTLARLRARGIECLDPAHLSFALHAPAAPGA 81
Query: 89 GPDDVRQKRP----TRGGGAAP 36
P V +K R G AP
Sbjct: 82 APHAVEEKTARTVVIRAHGVAP 103
