Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000225A_C01 KCC000225A_c01
(343 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_294249.3| similar to GluR-delta2 philic-protein [Homo sap... 32 1.8
ref|XP_353726.1| similar to GluR-delta2 philic-protein [Homo sap... 32 1.8
pir||S54264 glycoprotein gC - bovine herpesvirus 1 gi|804967|emb... 25 4.5
pir||S69968 TyA protein - yeast (Saccharomyces cerevisiae) retro... 30 6.7
ref|NP_058186.1| TyA Gag protein; the main structural constituen... 30 6.7
>ref|XP_294249.3| similar to GluR-delta2 philic-protein [Homo sapiens]
Length = 1336
Score = 32.3 bits (72), Expect = 1.8
Identities = 26/73 (35%), Positives = 34/73 (45%)
Frame = +3
Query: 99 GVNLTYTCHADHDPPVVLSVPSPRQPLIFSHNRTAARLPTASTTIATAHTFMCVRLRSYG 278
G +LTY+ +DH PP LS P P PL F + ++R S A A +L S+
Sbjct: 784 GSSLTYSSISDHIPPPPLS-PPPPPPLPFHDAKPSSRSSDGSRGPAQALAKPLTQL-SHP 841
Query: 279 CIQNPAP*FPEPV 317
P P P PV
Sbjct: 842 VPPPPPPPLPPPV 854
>ref|XP_353726.1| similar to GluR-delta2 philic-protein [Homo sapiens]
Length = 1323
Score = 32.3 bits (72), Expect = 1.8
Identities = 26/73 (35%), Positives = 34/73 (45%)
Frame = +3
Query: 99 GVNLTYTCHADHDPPVVLSVPSPRQPLIFSHNRTAARLPTASTTIATAHTFMCVRLRSYG 278
G +LTY+ +DH PP LS P P PL F + ++R S A A +L S+
Sbjct: 771 GSSLTYSSISDHIPPPPLS-PPPPPPLPFHDAKPSSRSSDGSRGPAQALAKPLTQL-SHP 828
Query: 279 CIQNPAP*FPEPV 317
P P P PV
Sbjct: 829 VPPPPPPPLPPPV 841
>pir||S54264 glycoprotein gC - bovine herpesvirus 1 gi|804967|emb|CAA89198.1|
glycoprotein gC [Bovine herpesvirus 1]
Length = 508
Score = 25.4 bits (54), Expect(2) = 4.5
Identities = 9/17 (52%), Positives = 11/17 (63%)
Frame = +3
Query: 126 ADHDPPVVLSVPSPRQP 176
++HDPPV S P P P
Sbjct: 85 SEHDPPVTNSTPPPAPP 101
Score = 24.3 bits (51), Expect(2) = 4.5
Identities = 15/47 (31%), Positives = 19/47 (39%), Gaps = 1/47 (2%)
Frame = +2
Query: 188 PQPNSCPPSNSVYYHCHCTYVHVRASAKLWVHSKPC-TLISGARLPL 325
PQP+ PP + C V + L+VH GARL L
Sbjct: 127 PQPSKAPPKERKWMLCEREAVAASYAEPLYVHCGVADNATGGARLEL 173
>pir||S69968 TyA protein - yeast (Saccharomyces cerevisiae) retrotransposon
Ty2.L
Length = 438
Score = 30.4 bits (67), Expect = 6.7
Identities = 14/51 (27%), Positives = 24/51 (46%)
Frame = +2
Query: 179 NIQPQPNSCPPSNSVYYHCHCTYVHVRASAKLWVHSKPCTLISGARLPLSP 331
++ PQP S PP + Y H +A A W H + ++++ + SP
Sbjct: 69 HVSPQPASVPPPQNGQYQQHGMMTPNKAMASNWAHYQQPSMMTCSHYQTSP 119
>ref|NP_058186.1| TyA Gag protein; the main structural constituent of virus-like
particles (VLPs); Yor192c-ap [Saccharomyces cerevisiae]
gi|2120111|pir||S70231 TyA protein - yeast
(Saccharomyces cerevisiae) retrotransposon Ty2.O
gi|1420461|emb|CAA99403.1| TY2A [Saccharomyces
cerevisiae] gi|1431577|emb|CAA99405.1| TY2A
[Saccharomyces cerevisiae]
Length = 438
Score = 30.4 bits (67), Expect = 6.7
Identities = 14/51 (27%), Positives = 24/51 (46%)
Frame = +2
Query: 179 NIQPQPNSCPPSNSVYYHCHCTYVHVRASAKLWVHSKPCTLISGARLPLSP 331
++ PQP S PP + Y H +A A W H + ++++ + SP
Sbjct: 69 HVSPQPASVPPPQNGQYQQHGMMTPNKAMASNWAHYQQPSMMTCSHYQTSP 119
