Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000224A_C01 KCC000224A_c01
(610 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P14224|PSAG_CHLRE Photosystem I reaction center subunit V, ch... 234 7e-61
gb|AAK08496.1|AF329274_1 PsaG-like protein [Dunaliella salina] 89 4e-17
sp|Q00327|PSAG_HORVU Photosystem I reaction center subunit V, ch... 81 1e-14
ref|NP_175963.1| photosystem I subunit V precursor -related [Ara... 78 1e-13
sp|Q9SPM4|PSAG_TORRU Photosystem I reaction center subunit V, ch... 74 2e-12
>sp|P14224|PSAG_CHLRE Photosystem I reaction center subunit V, chloroplast precursor
(PSI-G) (Light-harvesting complex I 10 kDa protein) (P35
protein) gi|81246|pir||S06683 photosystem I chain V
precursor - Chlamydomonas reinhardtii
gi|18188|emb|CAA33257.1| polypeptide 35 precursor
[Chlamydomonas reinhardtii] gi|227068|prf||1613444B
photosystem I P35 protein
Length = 126
Score = 234 bits (597), Expect = 7e-61
Identities = 119/119 (100%), Positives = 119/119 (100%)
Frame = +2
Query: 35 PSLRASARVAPRRAPRVAVVTKAALDPQIVISGSTAAFLAIGRFVFLGYQRREANFDSTV 214
PSLRASARVAPRRAPRVAVVTKAALDPQIVISGSTAAFLAIGRFVFLGYQRREANFDSTV
Sbjct: 8 PSLRASARVAPRRAPRVAVVTKAALDPQIVISGSTAAFLAIGRFVFLGYQRREANFDSTV 67
Query: 215 GPKTTGATYFDDLQKNSTIFATNDPAGFNIIDVAGWGALGHAVGFAVLAINSLQGANLS 391
GPKTTGATYFDDLQKNSTIFATNDPAGFNIIDVAGWGALGHAVGFAVLAINSLQGANLS
Sbjct: 68 GPKTTGATYFDDLQKNSTIFATNDPAGFNIIDVAGWGALGHAVGFAVLAINSLQGANLS 126
>gb|AAK08496.1|AF329274_1 PsaG-like protein [Dunaliella salina]
Length = 143
Score = 89.4 bits (220), Expect = 4e-17
Identities = 49/99 (49%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Frame = +2
Query: 50 SARVAPRRAPRVAVVTKAALDPQIVISGSTAAFLAIGRFVFLGYQRREANFD---STVGP 220
S PR +V+ TKA L+P + I GST +FLA+GRFVFL YQRR + +GP
Sbjct: 11 SVAAVPRSRKQVS--TKAMLEPAVAIGGSTVSFLALGRFVFLPYQRRRTEMEVGPGRLGP 68
Query: 221 KTTGATYFDDLQKNSTIFATND--PAGFNIIDVAGWGAL 331
KTTG T+FD LQ+ + D P+GF +IDV GWGAL
Sbjct: 69 KTTGDTFFDRLQEACFLRGDQDKGPSGFGLIDVIGWGAL 107
>sp|Q00327|PSAG_HORVU Photosystem I reaction center subunit V, chloroplast precursor
(PSI-G) (Photosystem I 9 kDa protein)
gi|100606|pir||S20937 photosystem I chain V precursor -
barley gi|19091|emb|CAA42727.1| photosystem I
polypeptide PSI-G precursor [Hordeum vulgare]
Length = 143
Score = 80.9 bits (198), Expect = 1e-14
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Frame = +2
Query: 35 PSLRASARVAPRRAP-RVAVVTKAALDPQIVISGSTAAFLAIGRFVFLGYQRREANFDST 211
PS RA+A P R +V +AAL+P +VIS ST L +GRFVF +QR +
Sbjct: 21 PSPRAAASFRGVSPPARRSVAARAALEPSVVISLSTGLSLVMGRFVFFNFQRENV---AK 77
Query: 212 VGPKTTGATYFDDLQKNSTIFA----TNDPAGFNIIDVAGWGALGHAVGFAVLAINS 370
P+ G T+F+ + + FA +NDP GFN++DV WG++GH V + +LA S
Sbjct: 78 QVPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWGSIGHIVAYYILATTS 134
>ref|NP_175963.1| photosystem I subunit V precursor -related [Arabidopsis thaliana]
gi|20143884|sp|Q9S7N7|PSAG_ARATH Photosystem I reaction
center subunit V, chloroplast precursor (PSI-G)
gi|5734520|emb|CAB52748.1| photosystem I subunit V
precursor [Arabidopsis thaliana]
gi|11692916|gb|AAG40061.1|AF324710_1 At1g55670
[Arabidopsis thaliana]
gi|11908046|gb|AAG41452.1|AF326870_1 putative
photosystem I subunit V precursor [Arabidopsis thaliana]
gi|12642864|gb|AAK00374.1|AF339692_1 putative
photosystem I subunit V precursor [Arabidopsis thaliana]
gi|14190363|gb|AAK55662.1|AF378859_1 At1g55670/F20N2_3
[Arabidopsis thaliana] gi|15215865|gb|AAK91476.1|
At1g55670/F20N2_3 [Arabidopsis thaliana]
Length = 160
Score = 77.8 bits (190), Expect = 1e-13
Identities = 46/122 (37%), Positives = 66/122 (53%), Gaps = 4/122 (3%)
Frame = +2
Query: 17 RPWPPGPSLRASARVAPRRAPRVAVVTKAALDPQIVISGSTAAFLAIGRFVFLGYQRREA 196
RP G S A +++ + V +A L P IVIS ST L +GRFVF +QR
Sbjct: 32 RPLRLGGSSSALPKLSTTGRKSSSAVVRAELSPSIVISLSTGLSLFLGRFVFFNFQRE-- 89
Query: 197 NFDSTVGPKTTGATYF----DDLQKNSTIFATNDPAGFNIIDVAGWGALGHAVGFAVLAI 364
N P+ G T+F D ++ ++ +NDP GFNI+DV WG++GH V + +LA
Sbjct: 90 NVAKQGLPEQNGKTHFEAGDDRAKEYVSLLKSNDPIGFNIVDVLAWGSIGHIVAYYILAT 149
Query: 365 NS 370
+S
Sbjct: 150 SS 151
>sp|Q9SPM4|PSAG_TORRU Photosystem I reaction center subunit V, chloroplast precursor
(PSI-G) gi|5669169|gb|AAD46189.1|AF157017_1 photosystem
I reaction center subunit V precursor [Tortula ruralis]
Length = 112
Score = 73.9 bits (180), Expect = 2e-12
Identities = 45/100 (45%), Positives = 57/100 (57%), Gaps = 4/100 (4%)
Frame = +2
Query: 74 APRVAVVTKAALDPQIVISGSTAAFLAIGRFVFLGYQR----REANFDSTVGPKTTGATY 241
A A VT + +IS STAA LA+GRFVFL +QR R + P T T
Sbjct: 5 AKSAAKVTCDGANTSFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTTRRVTA 64
Query: 242 FDDLQKNSTIFATNDPAGFNIIDVAGWGALGHAVGFAVLA 361
++ ++ TNDPAGF ++DV WGALGHAVGF +LA
Sbjct: 65 VR--RRWWSMLKTNDPAGFTLVDVLAWGALGHAVGFFILA 102
