Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000212A_C01 KCC000212A_c01
(513 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP92613.1| Ab2-386 [Rattus norvegicus] 35 0.56
gb|AAP92607.1| Ab2-142 [Rattus norvegicus] 35 0.56
ref|XP_222695.2| similar to complement component factor h [Rattu... 35 0.56
ref|NP_900817.1| hypothetical protein CV1147 [Chromobacterium vi... 34 1.2
ref|NP_269483.1| putative chloride channel protein [Streptococcu... 34 1.2
>gb|AAP92613.1| Ab2-386 [Rattus norvegicus]
Length = 203
Score = 35.0 bits (79), Expect = 0.56
Identities = 15/26 (57%), Positives = 19/26 (72%), Gaps = 3/26 (11%)
Frame = +2
Query: 224 CISPPHPPHAVI---HAATYPASDTV 292
C++PPH P+AVI H A YP+ DTV
Sbjct: 148 CVNPPHVPNAVILTRHKAKYPSGDTV 173
>gb|AAP92607.1| Ab2-142 [Rattus norvegicus]
Length = 253
Score = 35.0 bits (79), Expect = 0.56
Identities = 15/26 (57%), Positives = 19/26 (72%), Gaps = 3/26 (11%)
Frame = +2
Query: 224 CISPPHPPHAVI---HAATYPASDTV 292
C++PPH P+AVI H A YP+ DTV
Sbjct: 148 CVNPPHVPNAVILTRHKAKYPSGDTV 173
>ref|XP_222695.2| similar to complement component factor h [Rattus norvegicus]
Length = 394
Score = 35.0 bits (79), Expect = 0.56
Identities = 15/26 (57%), Positives = 19/26 (72%), Gaps = 3/26 (11%)
Frame = +2
Query: 224 CISPPHPPHAVI---HAATYPASDTV 292
C++PPH P+AVI H A YP+ DTV
Sbjct: 213 CVNPPHVPNAVILTRHKAKYPSGDTV 238
>ref|NP_900817.1| hypothetical protein CV1147 [Chromobacterium violaceum ATCC 12472]
gi|34102456|gb|AAQ58822.1| hypothetical protein CV1147
[Chromobacterium violaceum ATCC 12472]
Length = 306
Score = 33.9 bits (76), Expect = 1.2
Identities = 25/80 (31%), Positives = 36/80 (44%), Gaps = 4/80 (5%)
Frame = +1
Query: 250 RSHPCRNIPGVRHCAHTERNP---ARLMCKQMPSDSTA*LSSERRPCMHHRRRRSGHAQL 420
+ P R P R A +R P ARL +Q+P+ + +R C R GHA
Sbjct: 199 QQRPQRRHPRRRRAARRQRPPPAAARLARQQLPAQQAVRRETRQRQCRVRTARPQGHAGD 258
Query: 421 TSVPNQRTAPGQC-AHA*IL 477
+ NQ+ +C +HA IL
Sbjct: 259 KAQENQQLLHPRCGSHAPIL 278
>ref|NP_269483.1| putative chloride channel protein [Streptococcus pyogenes]
gi|13622487|gb|AAK34204.1| putative chloride channel
protein [Streptococcus pyogenes M1 GAS]
Length = 437
Score = 33.9 bits (76), Expect = 1.2
Identities = 20/63 (31%), Positives = 27/63 (42%)
Frame = -1
Query: 426 GSQLCVAAATPPVVHTRSTLAAQLCR*IAWHLLAHQPRRITFGVCTVSDAGYVAAWMTAW 247
GS + A+ PP S L A L + WHLLA + + I + D + W W
Sbjct: 72 GSFSTMIASVPPQRRALSLLFAGLLAGLGWHLLAKKGKDIQSIQQIIQDDISFSPWTQFW 131
Query: 246 GGW 238
GW
Sbjct: 132 HGW 134
