KCC000210A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000210A_C01 KCC000210A_c01
gtgaacatTTGGTCAATAGGATACGTCTGAGACTATCTGAGCACCTCAAGAGCTGCTCTA
GCATCAATTCGTTGCAATTTTGAGAAGGTCCTTGTTGAACTTCGTCTCGTTATGACGGGC
TTGGTATCAGTGTAATCCTGAAGTAACATAGTTCTGAGCCAGGGCTTGCCCGGCTAGCCC
CGGCTTGGCTGTGGACTGAGACCGCGTTTGCCCAGCGTGCAAAGGGCGCCAGCGGCAGTT
GCTGGAGCAGCCGCGGAAGGCGTCATAGAGTAGGCTTTTAGTCCAGGCCCTGAGCGGCAT
TATAGGAGCGAGCGGCAACGATGGGGAACACCCAGGGGAAGGGGGATGGAGCGATGACAG
GCCGTGCAAAGGCTAATCACGGGAGGAGCCGTCAAGGGCAAGGCCACGCTTCCTAAGCTC
CCGACGAATGCGGTCAAGTCGCAACCAGAGGACTACGCATTCATCGAGAACGCGCTGGGT
CGCCTCCTACTGTTCGGCAAACTGGACTCGCAAGTACAGCGGAAGATAGTGTCTGAAATG
TATGAGCGGACGGTGCCGGCGGGTGACATTCTCATCAAGGAGGGCGACACAGGGCTTGCG
GCTTGCGAGCTCTACGTCGTGAAGAGCGGGAAGTTCGAGGTGCTGCAAAAGCGCCAAGGC
CAGAATGTGCGCGTGAACATCAAGGAGCGCGGCGACTGCTTCGGCGAAATCTCGCTGATG
TATGACAGCCCACGCACAGCCACCGTCGCGGCCACCATGGACGCCGTGGTGTGGGCCCTG
GACCGCCAGGTCTTCAGGTTCTTCGTGCGGGAGCTGCAGGAGACCC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000210A_C01 KCC000210A_c01
         (826 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAB18105.1| cyclic nucreotide dependent protein kinase II [C...   298  6e-80
dbj|BAB18104.1| cyclic nucleotide dependent protein kinase [Chla...   193  3e-48
sp|P31320|KAPR_BLAEM cAMP-dependent protein kinase regulatory ch...    87  3e-16
gb|AAA33015.1| cAMP-dependent protein kinase regulatory subunit        87  3e-16
ref|NP_012231.1| Involved in heat shock resistance, glycogen acc...    83  5e-15

>dbj|BAB18105.1| cyclic nucreotide dependent protein kinase II [Chlamydomonas
           reinhardtii]
          Length = 718

 Score =  298 bits (764), Expect = 6e-80
 Identities = 153/167 (91%), Positives = 156/167 (92%)
 Frame = +1

Query: 325 GTPRGRGMER*QAVQRLITGGAVKGKATLPKLPTNAVKSQPEDYAFIENALGRLLLFGKL 504
           G  +G+G        + ITGGAVKGKATLPKLPTNAVKSQPEDYAFIENALGRLLLFGKL
Sbjct: 2   GNTQGKGDGAMTGRAKAITGGAVKGKATLPKLPTNAVKSQPEDYAFIENALGRLLLFGKL 61

Query: 505 DSQVQRKIVSEMYERTVPAGDILIKEGDTGLAACELYVVKSGKFEVLQKRQGQNVRVNIK 684
           DSQVQRKIVSEMYERTVPAGDILIKEGDTGLAACELYVVKSGKFEVLQKRQGQNVRVNIK
Sbjct: 62  DSQVQRKIVSEMYERTVPAGDILIKEGDTGLAACELYVVKSGKFEVLQKRQGQNVRVNIK 121

Query: 685 ERGDCFGEISLMYDSPRTATVAATMDAVVWALDRQVFRFFVRELQET 825
           ERGDCFGEISLMYDSPRTATVAATMDAVVWALDRQVFRFFVRELQET
Sbjct: 122 ERGDCFGEISLMYDSPRTATVAATMDAVVWALDRQVFRFFVRELQET 168

 Score = 55.8 bits (133), Expect = 8e-07
 Identities = 38/120 (31%), Positives = 57/120 (46%)
 Frame = +1

Query: 463 IENALGRLLLFGKLDSQVQRKIVSEMYERTVPAGDILIKEGDTGLAACELYVVKSGKFEV 642
           +E  L  + +   L  + + ++V    E T  AG  +I EGD G      Y+VK G+  V
Sbjct: 173 VELFLNSVPILANLSREERIRLVDAFEENTYQAGQKVIVEGDKGDL---FYIVKEGEAIV 229

Query: 643 LQKRQGQNVRVNIKERGDCFGEISLMYDSPRTATVAATMDAVVWALDRQVFRFFVRELQE 822
            Q   G   +VN   + D F E +L+ D PR ATV A    V   L R+ F+  +  L++
Sbjct: 230 YQNTPGGQRKVNHLFKADFFSERALLKDEPRMATVEAYTKLVCLTLKRETFQEILGPLEQ 289

 Score = 42.7 bits (99), Expect = 0.007
 Identities = 20/27 (74%), Positives = 23/27 (85%)
 Frame = +3

Query: 321 MGNTQGKGDGAMTGRAKANHGRSRQGQ 401
           MGNTQGKGDGAMTGRAKA  G + +G+
Sbjct: 1   MGNTQGKGDGAMTGRAKAITGGAVKGK 27

>dbj|BAB18104.1| cyclic nucleotide dependent protein kinase [Chlamydomonas
           reinhardtii]
          Length = 646

 Score =  193 bits (491), Expect = 3e-48
 Identities = 96/96 (100%), Positives = 96/96 (100%)
 Frame = +1

Query: 538 MYERTVPAGDILIKEGDTGLAACELYVVKSGKFEVLQKRQGQNVRVNIKERGDCFGEISL 717
           MYERTVPAGDILIKEGDTGLAACELYVVKSGKFEVLQKRQGQNVRVNIKERGDCFGEISL
Sbjct: 1   MYERTVPAGDILIKEGDTGLAACELYVVKSGKFEVLQKRQGQNVRVNIKERGDCFGEISL 60

Query: 718 MYDSPRTATVAATMDAVVWALDRQVFRFFVRELQET 825
           MYDSPRTATVAATMDAVVWALDRQVFRFFVRELQET
Sbjct: 61  MYDSPRTATVAATMDAVVWALDRQVFRFFVRELQET 96

 Score = 58.2 bits (139), Expect = 2e-07
 Identities = 39/120 (32%), Positives = 58/120 (47%)
 Frame = +1

Query: 463 IENALGRLLLFGKLDSQVQRKIVSEMYERTVPAGDILIKEGDTGLAACELYVVKSGKFEV 642
           +E  L  + +   L  + + ++V    E T  AG  +I EGD G      Y+VK G+  V
Sbjct: 101 VELFLNSVPILANLSREERIRLVDAFEENTYQAGQKVIVEGDKGDL---FYIVKEGEAIV 157

Query: 643 LQKRQGQNVRVNIKERGDCFGEISLMYDSPRTATVAATMDAVVWALDRQVFRFFVRELQE 822
            Q   G   +VN   + D FGE +L+ D PR ATV A    V   L R+ F+  +  L++
Sbjct: 158 YQNTPGGQRKVNHLFKADFFGERALLKDEPRMATVEAYTKLVCLTLKRETFQEILGPLEQ 217

>sp|P31320|KAPR_BLAEM cAMP-dependent protein kinase regulatory chain
           gi|285215|pir||A43435 protein kinase (EC 2.7.1.37),
           cAMP-dependent, type II regulatory chain - fungus
           (Blastocladiella emersonii) gi|167192|gb|AAA33016.1|
           cAMP-dependent protein kinase regulatory subunit
          Length = 403

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
 Frame = +1

Query: 433 VKSQPEDYAFIENALGRLLLFGKLDSQVQRKIVSEMYERTVPAGDILIKEGDTGLAACEL 612
           +    E  A I+ ++G   LF  LD      +V+ M E+ V AG+++I++G  G      
Sbjct: 137 IPKSDEQRARIQASIGNNFLFRNLDEDQYTDVVNAMAEKKVAAGEVVIRQGGVG---DYF 193

Query: 613 YVVKSGKFEVLQKRQGQ-NVRVNIKERGDCFGEISLMYDSPRTATVAATMDAVVWALDRQ 789
           YVV++G  +V   R G  +V+V     G  FGE++LMY++PR ATV AT ++V+WALDR 
Sbjct: 194 YVVETGALDVFVNRNGNGDVKVTDYSAGGSFGELALMYNAPRAATVVATAESVLWALDRV 253

Query: 790 VFR 798
            FR
Sbjct: 254 TFR 256

 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 28/97 (28%), Positives = 49/97 (49%), Gaps = 1/97 (1%)
 Frame = +1

Query: 466 ENALGRLLLFGKLDSQVQRKIVSEMYERTVPAGDILIKEGDTGLAACELYVVKSGKFEVL 645
           E  L  + L   L+   + KI   +       GD++I++GD G      Y++++G  EV+
Sbjct: 271 EAFLEEVPLLSSLEPYERHKIADALESVAYADGDVVIRQGDVGE---NFYIIEAGDAEVI 327

Query: 646 Q-KRQGQNVRVNIKERGDCFGEISLMYDSPRTATVAA 753
           +    G+        +G+ FGE++L+ D PR AT+ A
Sbjct: 328 KIDENGEEHHFRPLHKGNYFGELALLSDKPRVATIRA 364

>gb|AAA33015.1| cAMP-dependent protein kinase regulatory subunit
          Length = 403

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 1/123 (0%)
 Frame = +1

Query: 433 VKSQPEDYAFIENALGRLLLFGKLDSQVQRKIVSEMYERTVPAGDILIKEGDTGLAACEL 612
           +    E  A I+ ++G   LF  LD      +V+ M E+ V AG+++I++G  G      
Sbjct: 137 IPKSDEQRARIQASIGNNFLFRNLDEDQYTDVVNAMAEKKVAAGEVVIRQGGVG---DYF 193

Query: 613 YVVKSGKFEVLQKRQGQ-NVRVNIKERGDCFGEISLMYDSPRTATVAATMDAVVWALDRQ 789
           YVV++G  +V   R G  +V+V     G  FGE++LMY++PR ATV AT ++V+WALDR 
Sbjct: 194 YVVETGALDVFVNRNGNGDVKVTDYSAGGSFGELALMYNAPRAATVVATAESVLWALDRV 253

Query: 790 VFR 798
            FR
Sbjct: 254 TFR 256

 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 28/97 (28%), Positives = 49/97 (49%), Gaps = 1/97 (1%)
 Frame = +1

Query: 466 ENALGRLLLFGKLDSQVQRKIVSEMYERTVPAGDILIKEGDTGLAACELYVVKSGKFEVL 645
           E  L  + L   L+   + KI   +       GD++I++GD G      Y++++G  EV+
Sbjct: 271 EAFLEEVPLLSSLEPYERHKIADALESVAYADGDVVIRQGDVGE---NFYIIEAGDAEVI 327

Query: 646 Q-KRQGQNVRVNIKERGDCFGEISLMYDSPRTATVAA 753
           +    G+        +G+ FGE++L+ D PR AT+ A
Sbjct: 328 KIDENGEEHHFRPLHKGNYFGELALLSDKPRVATIRA 364

>ref|NP_012231.1| Involved in heat shock resistance, glycogen accumulation, and
           sporulation; Bcy1p [Saccharomyces cerevisiae]
           gi|125222|sp|P07278|KAPR_YEAST cAMP-dependent protein
           kinase regulatory chain gi|279519|pir||OKBYRC protein
           kinase (EC 2.7.1.37), cAMP-dependent, regulatory chain -
           yeast (Saccharomyces cerevisiae)
           gi|171159|gb|AAA34468.1| cAMP-dependent protein kinase
           regulatory subunit gi|172689|gb|AAA66934.1|
           cAMP-dependent protein kinase regulatory subunit
           gi|600015|emb|CAA86918.1| cAMP-dependent protein kinase
           regulatory chain [Saccharomyces cerevisiae]
          Length = 416

 Score = 83.2 bits (204), Expect = 5e-15
 Identities = 46/112 (41%), Positives = 66/112 (58%)
 Frame = +1

Query: 463 IENALGRLLLFGKLDSQVQRKIVSEMYERTVPAGDILIKEGDTGLAACELYVVKSGKFEV 642
           +E ++    LF KLDS  +R +++ + E++VP G  +IK+GD G      YVV+ G  + 
Sbjct: 175 LEKSIRNNFLFNKLDSDSKRLVINCLEEKSVPKGATIIKQGDQG---DYFYVVEKGTVDF 231

Query: 643 LQKRQGQNVRVNIKERGDCFGEISLMYDSPRTATVAATMDAVVWALDRQVFR 798
                    +VN    G  FGE++LMY+SPR ATV AT D ++WALDR  FR
Sbjct: 232 YVNDN----KVNSSGPGSSFGELALMYNSPRAATVVATSDCLLWALDRLTFR 279

 Score = 47.8 bits (112), Expect = 2e-04
 Identities = 32/111 (28%), Positives = 56/111 (49%)
 Frame = +1

Query: 466 ENALGRLLLFGKLDSQVQRKIVSEMYERTVPAGDILIKEGDTGLAACELYVVKSGKFEVL 645
           ++ L  + +   L +  + K+   +  +    G+ +I+EGD G      Y+++ G  +V 
Sbjct: 294 DDLLKSMPVLKSLTTYDRAKLADALDTKIYQPGETIIREGDQGE---NFYLIEYGAVDVS 350

Query: 646 QKRQGQNVRVNIKERGDCFGEISLMYDSPRTATVAATMDAVVWALDRQVFR 798
           +K QG    +N  +  D FGE++L+ D PR ATV AT    V  L +  F+
Sbjct: 351 KKGQGV---INKLKDHDYFGEVALLNDLPRQATVTATKRTKVATLGKSGFQ 398



EST assemble image


clone accession position
1 LCL004f12_r AV626228 1 516
2 MXL030d08_r BP094823 9 289
3 CL10g02_r AV393660 45 575
4 MXL041b07_r BP095393 440 826




Chlamydomonas reinhardtii
Kazusa DNA Research Institute