Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000206A_C01 KCC000206A_c01
(391 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_113663.1| espin [Homo sapiens] gi|12053261|emb|CAB66814.1... 39 0.018
gb|AAF00040.1| POU-box protein brain-2 [Coturnix japonica] 39 0.018
dbj|BAC55695.1| putative diaphanous homologue [Oryza sativa (jap... 39 0.023
ref|ZP_00094763.1| COG0532: Translation initiation factor 2 (IF-... 38 0.030
dbj|BAB86117.1| P0678F11.24 [Oryza sativa (japonica cultivar-gro... 38 0.030
>ref|NP_113663.1| espin [Homo sapiens] gi|12053261|emb|CAB66814.1| hypothetical
protein [Homo sapiens]
Length = 854
Score = 38.9 bits (89), Expect = 0.018
Identities = 39/116 (33%), Positives = 50/116 (42%), Gaps = 11/116 (9%)
Frame = +2
Query: 71 PRAFSKGDCSLIVQPA--EFYIYIAFQSAH*RC---SHWAGPGPRYSHCLLAEAQPRAAR 235
PRAFSK QP+ ++Y + RC + A PG +S E + R
Sbjct: 507 PRAFSK-------QPSTGDYYRQLG------RCPGETLAARPGMAHSE----EVRARQPA 549
Query: 236 RMRCLTLAPWPR--I*CHTAAPASAPAESNHRARGALAPPAS----PLPPPPAPPP 385
R C L P R + +A P +A NH G A P + PLPPPP PPP
Sbjct: 550 RAGCPRLGPAARGSLEGPSAPPQAALLPGNHVPNGCAADPKASRELPLPPPPPPPP 605
>gb|AAF00040.1| POU-box protein brain-2 [Coturnix japonica]
Length = 431
Score = 38.9 bits (89), Expect = 0.018
Identities = 17/32 (53%), Positives = 18/32 (56%)
Frame = -2
Query: 384 GGGAGGGGSGDAGGASAPRARWLLSAGADAGA 289
GGG GGGG G GG A W +A A AGA
Sbjct: 69 GGGGGGGGGGGGGGGGGGEAPWAAAAAAAAGA 100
>dbj|BAC55695.1| putative diaphanous homologue [Oryza sativa (japonica
cultivar-group)]
Length = 1627
Score = 38.5 bits (88), Expect = 0.023
Identities = 24/71 (33%), Positives = 27/71 (37%)
Frame = +2
Query: 179 PGPRYSHCLLAEAQPRAARRMRCLTLAPWPRI*CHTAAPASAPAESNHRARGALAPPASP 358
P P SH P A R P P H AP P R+ +PP P
Sbjct: 992 PPPPISHSNAPPPPPLPAARFNAPPPPPPPPT-THFNAPPPPPPPPITRSGAPPSPPPPP 1050
Query: 359 LPPPPAPPPSS 391
PPPP PPP +
Sbjct: 1051 SPPPPPPPPGA 1061
Score = 32.0 bits (71), Expect = 2.2
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +2
Query: 344 PPASPLPPPPAPPPSS 391
PP PLPPPP PP SS
Sbjct: 857 PPPPPLPPPPPPPASS 872
Score = 31.2 bits (69), Expect = 3.7
Identities = 15/33 (45%), Positives = 17/33 (51%)
Frame = +2
Query: 293 PASAPAESNHRARGALAPPASPLPPPPAPPPSS 391
P P + GA PP P PPPP PPPS+
Sbjct: 934 PPPPPPPPLKPSSGAPCPPPPP-PPPPPPPPSA 965
Score = 30.8 bits (68), Expect = 4.8
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Frame = +2
Query: 293 PASAPAESNHRARGALAPPASP------LPPPPAPPPSS 391
P P+ + RA + PP P +PPPP PPP S
Sbjct: 959 PPPPPSAPSSRAFSSAPPPPPPPPLLRSVPPPPPPPPIS 997
Score = 30.4 bits (67), Expect = 6.3
Identities = 13/30 (43%), Positives = 15/30 (49%)
Frame = +2
Query: 296 ASAPAESNHRARGALAPPASPLPPPPAPPP 385
AS+ + S H P P PPPP PPP
Sbjct: 836 ASSSSLSMHMGSATKQQPPPPPPPPPLPPP 865
>ref|ZP_00094763.1| COG0532: Translation initiation factor 2 (IF-2; GTPase)
[Novosphingobium aromaticivorans]
Length = 878
Score = 38.1 bits (87), Expect = 0.030
Identities = 19/35 (54%), Positives = 23/35 (65%)
Frame = +2
Query: 287 AAPASAPAESNHRARGALAPPASPLPPPPAPPPSS 391
AAP +APA + A +APP P PPPP PPPS+
Sbjct: 57 AAPTAAPAAAATPAPTPVAPP--PPPPPPPPPPSA 89
Score = 33.9 bits (76), Expect = 0.57
Identities = 19/36 (52%), Positives = 20/36 (54%)
Frame = +2
Query: 284 TAAPASAPAESNHRARGALAPPASPLPPPPAPPPSS 391
TAAPA+A A A P A P PPPP PPP S
Sbjct: 60 TAAPAAA-------ATPAPTPVAPPPPPPPPPPPPS 88
>dbj|BAB86117.1| P0678F11.24 [Oryza sativa (japonica cultivar-group)]
Length = 401
Score = 38.1 bits (87), Expect = 0.030
Identities = 18/43 (41%), Positives = 22/43 (50%)
Frame = +2
Query: 254 LAPWPRI*CHTAAPASAPAESNHRARGALAPPASPLPPPPAPP 382
L PWP +AA +AP + R + PP P PPPP PP
Sbjct: 7 LLPWP---APSAARLAAPTRTRPPPRTRVRPPPPPAPPPPPPP 46
