KCC000183A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000183A_C01 KCC000183A_c01
gaagctggtgcgcaccctgcctaaggtgctgaagtatctgccctcggacaaggcgcagga
cgccaagaacttcgtgaacaGCCTGCAGTACTGGCTGGGCGGTAACTCGGACAACCTGGA
GAACCTGCTGCTGAACACCGTCAGCAACTACGTGCCCGCTCTGAAGGGCGTGGACTTCAG
CGTGGCTGAGCCCACCGCCTACCCCGATGTGGGTATCTGGCACCCTCTGGCCTCGGGCAT
GTACGAGGACCTGAAGGAGTACCTGAACTGGTACGACACCCGCAAGGACATGGTCTTCGC
CAAGGACGCCCCCGTCATTGGCCTGGTGCTGCAGCGCTCGCACCTGGTGACTGGCGATGA
GGGCCACTACAGCGGCGTGGTCGCTGAGCTGGAGAGCCGCGGTGCTAAGGTCATCCCCGT
CTTTGCCGGTGGCCTGGACTTCTCCGCCCCCGTCAAGAAGTTCTTCTACGACCCCCTGGG
CTCTGGCCGCACGTTCGTGGACACCGTTGTGTCGCTGACCGGCTTCGCGCTGGTGGGCGG
CCCCGCGCGCCAGGACGCGCCGAAGGCCATTGAGGCGCTGAAGAACCTGAACGTGCCCTA
CCTGGTGTCGCTGCCGCTGGTGTTCCAGACCACTGAGGAGTGGCTGGACAGCGAGCTGGG
CGTGCACCCCGTCCAGGTGGCTCTGCAGGTTGCCCTGCCCGAGCTGGATGGTGCCATGGA
GCCCATCGTGTTCGCTGGCCGTGACTCGAACACCGGCAAGTCGCACTCGCTGCCCGACCG
CATCGCTTCGCTGTGCGCTCGCGCCGTGAACTGGGCCAACCTGCGCAAGAAGCGCAACGC
CGAGAAGAAGCTGGCCGTCACCGTGTTCAGCTTCCCCCCTGACAAGGGCAACGTCGGCAC
TGCCGCCTACCTGAACGTGTTCGGCTCCATCTACCGCGTGCTGAAGAACCTGCAGCGCGA
GGGCTACGACGTGGGCGCCCTGCCGCCCTCGGAGGAGGATCTGATCCAGTCGGTGCTGAC
CCAGAAGGAGGCCAAGTTCAACTCGACCGACCTGCACATCGCCTACAAGATGAAGGTGGA
CGAGTACCAGAAGCTGTGCCCTTACGCCGAGGCGCTGGAGGAGAACTGGGGCAAGCCCCC
CGGCACCCTGAACACCAACGGCCAGGAGCTGCTGGTGTACGGCCGCCAGTACGGCAACGT
CTTCATCGGCGTGCAGCCCACCTTCGGCTACGAGGGCGACCCGATGCGCCTGCTGTTCTC
GAAGTCGGCCAGCCCCCACCACGGCTTCGCCGCCTACTACACCTTCCTGGAGAAGATCTT
CAAGGCCGACGCCGTGCTGCACTTCGGCACCCACGGCTCGCTGGAGTTCATGCCCGGCAA
GCAGGTCGGCATGTCGGGTGTGTGCTACCCCGACTCGCTGATCGGCACCATCCCCAACCT
CTACTACTACGCCGCCAACAACCCGTCTGAGGCCACCATCGCCAAGCGCCGCTCGTACGC
CAACACCATTTGCGTACCTGACGCCGCCTGCCGAGAACGCCGGCCTGTACAAGGGCCTGA
AGGAGCTGAAGGAGCTGATCAGCTCGTACCAGGGCATGCGTGAGTCTGGCCGCGCCGAGC
AGATCTGCGCCACCATCATTGAGACCGCCAAGCTGTGCAACCTGGACCGCGACGTGACCC
TGCCCGACGCTGACGCCAAGGACCTGACCATGGACATGCGCGACAGCGTTGTGGGCCAGG
TGTACCGCAAGCTGATGGAGATTGAGTCCCGCCTGCTGCCCTGCGGCCTGCACGTGGTGG
GCTGCCCGCCCACCGCCGAGGAGGCCGTGGCCACCCTGGTCAACATCGCTGAGCTGGACC
GCCCGGACAACAACCCCCCCATCAAGGGCATGCCCGGCATCCTGGCCCGCGCCATTGGTC
GCGACATCGAGTCGATTTACAGCGGCAACAACAAGGGCGTCCTGGCTGACGTTGACCAGC
TGCAGCGCATCACCGAGGCCTCCCGCACCTGCGTGCGCGAGTTCGTGAAGGACCGCACCG
GCCTGAACGGCCGCATCGGCACCAACTGGATCACCAACCTGCTCAAGTTCACCGGCTTCT
ACGTGGACCCCTGGGTGCGCGGCCTGCAGAACGGCGAGTTCGCCAGCGCCAACCGCGAGG
AGCTGATCACCCTGTTCAACTACCTGGAGTTCTGCCTGACCCAGGTGGTCAAGGACAA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000183A_C01 KCC000183A_c01
         (2218 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAC69552.1| Magnesium chelatase H subunit [Chlamydomonas rei...  1015  0.0
pir||T07126 magnesium chelatase (EC 4.99.1.-) chain chlH - soybe...   777  0.0
ref|NP_196867.1| cobalamin biosynthesis protein [Arabidopsis tha...   762  0.0
gb|AAL79577.1| AT5g13630/MSH12_9 [Arabidopsis thaliana]               759  0.0
pir||S71288 protoporphyrin IX magnesium chelatase (EC 4.99.1.-) ...   759  0.0

>emb|CAC69552.1| Magnesium chelatase H subunit [Chlamydomonas reinhardtii]
            gi|15558847|emb|CAC69537.1| Magnesium chelatase H-subunit
            [Chlamydomonas reinhardtii]
          Length = 1399

 Score = 1015 bits (2625), Expect(2) = 0.0
 Identities = 501/503 (99%), Positives = 501/503 (99%)
 Frame = +2

Query: 2    KLVRTLPKVLKYLPSDKAQDAKNFVNSLQYWLGGNSDNLENLLLNTVSNYVPALKGVDFS 181
            KLVRTLPKVLKYLPSDKAQDAKNFVNSLQYWLGGNSDNLENLLLNTVSNYVPALKGVDFS
Sbjct: 233  KLVRTLPKVLKYLPSDKAQDAKNFVNSLQYWLGGNSDNLENLLLNTVSNYVPALKGVDFS 292

Query: 182  VAEPTAYPDVGIWHPLASGMYEDLKEYLNWYDTRKDMVFAKDAPVIGLVLQRSHLVTGDE 361
            VAEPTAYPDVGIWHPLASGMYEDLKEYLNWYDTRKDMVFAKDAPVIGLVLQRSHLVTGDE
Sbjct: 293  VAEPTAYPDVGIWHPLASGMYEDLKEYLNWYDTRKDMVFAKDAPVIGLVLQRSHLVTGDE 352

Query: 362  GHYSGVVAELESRGAKVIPVFAGGLDFSAPVKKFFYDPLGSGRTFVDTVVSLTGFALVGG 541
            GHYSGVVAELESRGAKVIPVFAGGLDFS PV KFFYDPLGSGRTFVDTVVSLTGFALVGG
Sbjct: 353  GHYSGVVAELESRGAKVIPVFAGGLDFSDPVNKFFYDPLGSGRTFVDTVVSLTGFALVGG 412

Query: 542  PARQDAPKAIEALKNLNVPYLVSLPLVFQTTEEWLDSELGVHPVQVALQVALPELDGAME 721
            PARQDAPKAIEALKNLNVPYLVSLPLVFQTTEEWLDSELGVHPVQVALQVALPELDGAME
Sbjct: 413  PARQDAPKAIEALKNLNVPYLVSLPLVFQTTEEWLDSELGVHPVQVALQVALPELDGAME 472

Query: 722  PIVFAGRDSNTGKSHSLPDRIASLCARAVNWANLRKKRNAEKKLAVTVFSFPPDKGNVGT 901
            PIVFAGRDSNTGKSHSLPDRIASLCARAVNWANLRKKRNAEKKLAVTVFSFPPDKGNVGT
Sbjct: 473  PIVFAGRDSNTGKSHSLPDRIASLCARAVNWANLRKKRNAEKKLAVTVFSFPPDKGNVGT 532

Query: 902  AAYLNVFGSIYRVLKNLQREGYDVGALPPSEEDLIQSVLTQKEAKFNSTDLHIAYKMKVD 1081
            AAYLNVFGSIYRVLKNLQREGYDVGALPPSEEDLIQSVLTQKEAKFNSTDLHIAYKMKVD
Sbjct: 533  AAYLNVFGSIYRVLKNLQREGYDVGALPPSEEDLIQSVLTQKEAKFNSTDLHIAYKMKVD 592

Query: 1082 EYQKLCPYAEALEENWGKPPGTLNTNGQELLVYGRQYGNVFIGVQPTFGYEGDPMRLLFS 1261
            EYQKLCPYAEALEENWGKPPGTLNTNGQELLVYGRQYGNVFIGVQPTFGYEGDPMRLLFS
Sbjct: 593  EYQKLCPYAEALEENWGKPPGTLNTNGQELLVYGRQYGNVFIGVQPTFGYEGDPMRLLFS 652

Query: 1262 KSASPHHGFAAYYTFLEKIFKADAVLHFGTHGSLEFMPGKQVGMSGVCYPDSLIGTIPNL 1441
            KSASPHHGFAAYYTFLEKIFKADAVLHFGTHGSLEFMPGKQVGMSGVCYPDSLIGTIPNL
Sbjct: 653  KSASPHHGFAAYYTFLEKIFKADAVLHFGTHGSLEFMPGKQVGMSGVCYPDSLIGTIPNL 712

Query: 1442 YYYAANNPSEATIAKRRSYANTI 1510
            YYYAANNPSEATIAKRRSYANTI
Sbjct: 713  YYYAANNPSEATIAKRRSYANTI 735

 Score =  472 bits (1215), Expect(2) = 0.0
 Identities = 234/235 (99%), Positives = 235/235 (99%)
 Frame = +3

Query: 1512 AYLTPPAENAGLYKGLKELKELISSYQGMRESGRAEQICATIIETAKLCNLDRDVTLPDA 1691
            +YLTPPAENAGLYKGLKELKELISSYQGMRESGRAEQICATIIETAKLCNLDRDVTLPDA
Sbjct: 736  SYLTPPAENAGLYKGLKELKELISSYQGMRESGRAEQICATIIETAKLCNLDRDVTLPDA 795

Query: 1692 DAKDLTMDMRDSVVGQVYRKLMEIESRLLPCGLHVVGCPPTAEEAVATLVNIAELDRPDN 1871
            DAKDLTMDMRDSVVGQVYRKLMEIESRLLPCGLHVVGCPPTAEEAVATLVNIAELDRPDN
Sbjct: 796  DAKDLTMDMRDSVVGQVYRKLMEIESRLLPCGLHVVGCPPTAEEAVATLVNIAELDRPDN 855

Query: 1872 NPPIKGMPGILARAIGRDIESIYSGNNKGVLADVDQLQRITEASRTCVREFVKDRTGLNG 2051
            NPPIKGMPGILARAIGRDIESIYSGNNKGVLADVDQLQRITEASRTCVREFVKDRTGLNG
Sbjct: 856  NPPIKGMPGILARAIGRDIESIYSGNNKGVLADVDQLQRITEASRTCVREFVKDRTGLNG 915

Query: 2052 RIGTNWITNLLKFTGFYVDPWVRGLQNGEFASANREELITLFNYLEFCLTQVVKD 2216
            RIGTNWITNLLKFTGFYVDPWVRGLQNGEFASANREELITLFNYLEFCLTQVVKD
Sbjct: 916  RIGTNWITNLLKFTGFYVDPWVRGLQNGEFASANREELITLFNYLEFCLTQVVKD 970

>pir||T07126 magnesium chelatase (EC 4.99.1.-) chain chlH - soybean
            gi|3059095|emb|CAA04526.1| magnesium chelatase subunit
            [Glycine max]
          Length = 1383

 Score =  777 bits (2006), Expect(2) = 0.0
 Identities = 376/506 (74%), Positives = 433/506 (85%), Gaps = 3/506 (0%)
 Frame = +2

Query: 2    KLVRTLPKVLKYLPSDKAQDAKNFVNSLQYWLGGNSDNLENLLLNTVSNYVPALKGVDFS 181
            KLVRTLPKVLKYLPSDKAQDA+ ++ SLQ+WLGG+ DNL+N L     +Y+PALKG    
Sbjct: 218  KLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFLKMISGSYIPALKGTKIE 277

Query: 182  VAEPTAYPDVGIWHPLASGMYEDLKEYLNWYDTRKDM---VFAKDAPVIGLVLQRSHLVT 352
             +EP  Y DVGIWHPLA  MY+D+KEYLNWY TR+D    + + +APVIGLVLQRSH+VT
Sbjct: 278  YSEPVLYLDVGIWHPLAPCMYDDVKEYLNWYGTRRDANEKLKSPNAPVIGLVLQRSHIVT 337

Query: 353  GDEGHYSGVVAELESRGAKVIPVFAGGLDFSAPVKKFFYDPLGSGRTFVDTVVSLTGFAL 532
            GD+GHY  V+ ELE+RGAKVIP+FAGGLDFS PV+KFF DP+ + + FV++VVSLTGFAL
Sbjct: 338  GDDGHYVAVIMELEARGAKVIPIFAGGLDFSGPVEKFFIDPI-TKKPFVNSVVSLTGFAL 396

Query: 533  VGGPARQDAPKAIEALKNLNVPYLVSLPLVFQTTEEWLDSELGVHPVQVALQVALPELDG 712
            VGGPARQD P+A+EAL  L+VPY+V+LPLVFQTTEEWL+S LG+HP+QVALQVALPELDG
Sbjct: 397  VGGPARQDHPRAVEALMKLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDG 456

Query: 713  AMEPIVFAGRDSNTGKSHSLPDRIASLCARAVNWANLRKKRNAEKKLAVTVFSFPPDKGN 892
             MEPIVFAGRD  TGKSH+L  R+  LC RA+ WA L++K   EKKLA+TVFSFPPDKGN
Sbjct: 457  GMEPIVFAGRDPKTGKSHALHKRVEQLCIRAIRWAELKRKSKEEKKLAITVFSFPPDKGN 516

Query: 893  VGTAAYLNVFGSIYRVLKNLQREGYDVGALPPSEEDLIQSVLTQKEAKFNSTDLHIAYKM 1072
            VGTAAYLNVF SIY V+K L+++GY+V  LP + E LI+ VL  KEA+F+S +L+IAYKM
Sbjct: 517  VGTAAYLNVFASIYSVMKELKKDGYNVDGLPETSEALIEDVLHDKEAQFSSPNLNIAYKM 576

Query: 1073 KVDEYQKLCPYAEALEENWGKPPGTLNTNGQELLVYGRQYGNVFIGVQPTFGYEGDPMRL 1252
             V EYQ L PYA ALEENWGKPPG LN +G+ LLVYG+QYGNVFIGVQPTFGYEGDPMRL
Sbjct: 577  NVREYQNLTPYATALEENWGKPPGNLNADGENLLVYGKQYGNVFIGVQPTFGYEGDPMRL 636

Query: 1253 LFSKSASPHHGFAAYYTFLEKIFKADAVLHFGTHGSLEFMPGKQVGMSGVCYPDSLIGTI 1432
            LFSKSASPHHGFAAYY+F+EKIFKADAVLHFGTHGSLEFMPGKQVGMS VCYPDSLIG I
Sbjct: 637  LFSKSASPHHGFAAYYSFVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNI 696

Query: 1433 PNLYYYAANNPSEATIAKRRSYANTI 1510
            PN+YYYAANNPSEATIAKRRSYANTI
Sbjct: 697  PNVYYYAANNPSEATIAKRRSYANTI 722

 Score =  250 bits (639), Expect(2) = 0.0
 Identities = 132/236 (55%), Positives = 173/236 (72%), Gaps = 1/236 (0%)
 Frame = +3

Query: 1512 AYLTPPAENAGLYKGLKELKELISSYQGMRESGRAEQICATIIETAKLCNLDRDVTLPDA 1691
            +YLTPPAENAGLYKGLK+L ELISSYQ ++++GR  QI ++II TAK CNLD+DVTLPD 
Sbjct: 723  SYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGAQIVSSIISTAKQCNLDKDVTLPD- 781

Query: 1692 DAKDLTMDMRDSVVGQVYRKLMEIESRLLPCGLHVVGCPPTAEEAVATLVNIAELDRPDN 1871
            + +++    RD VVGQVY K+MEIESRLLPCGLH++G PP+A EAVATLVNIA LDRP++
Sbjct: 782  EGEEIPPKERDLVVGQVYSKIMEIESRLLPCGLHIIGEPPSALEAVATLVNIAALDRPED 841

Query: 1872 NPPIKGMPGILARAIGRDIESIYSGNNKGVLADVDQLQRITEASRTCVREFVKDRTGLNG 2051
               I  +P ILA  +GRDIE +Y G+NKG+L DV+ L++ITEASR  +  FV+  T   G
Sbjct: 842  G--ISSLPSILADTVGRDIEDVYRGSNKGILKDVELLRQITEASRGAITAFVERTTNNKG 899

Query: 2052 RIGTNWITNLLKFTGFYV-DPWVRGLQNGEFASANREELITLFNYLEFCLTQVVKD 2216
            ++  +    L    GF + +PW++ L N +F  A+RE+L TLF +L  CL  +V D
Sbjct: 900  QV-VDVADKLSSILGFGINEPWIQYLSNTKFYRADREKLRTLFVFLGECLKLIVAD 954

>ref|NP_196867.1| cobalamin biosynthesis protein [Arabidopsis thaliana]
            gi|9758028|dbj|BAB08689.1| cobalamin biosynthesis protein
            [Arabidopsis thaliana] gi|17978958|gb|AAL47483.1|
            AT5g13630/MSH12_9 [Arabidopsis thaliana]
            gi|25141227|gb|AAN73308.1| At5g13630/MSH12_9 [Arabidopsis
            thaliana]
          Length = 1381

 Score =  762 bits (1967), Expect(2) = 0.0
 Identities = 366/506 (72%), Positives = 431/506 (84%), Gaps = 3/506 (0%)
 Frame = +2

Query: 2    KLVRTLPKVLKYLPSDKAQDAKNFVNSLQYWLGGNSDNLENLLLNTVSNYVPALKGVDFS 181
            KLVRTLPKVLKYLPSDKAQDA+ ++ SLQ+WLGG+ DNL+N +     +YVPALKGV   
Sbjct: 216  KLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFVKMISGSYVPALKGVKIE 275

Query: 182  VAEPTAYPDVGIWHPLASGMYEDLKEYLNWYDTRKDM---VFAKDAPVIGLVLQRSHLVT 352
             ++P  + D GIWHPLA  MY+D+KEY NWYDTR+D    +  KDA V+GLVLQRSH+VT
Sbjct: 276  YSDPVLFLDTGIWHPLAPTMYDDVKEYWNWYDTRRDTNDSLKRKDATVVGLVLQRSHIVT 335

Query: 353  GDEGHYSGVVAELESRGAKVIPVFAGGLDFSAPVKKFFYDPLGSGRTFVDTVVSLTGFAL 532
            GD+ HY  V+ ELE+RGAKV+P+FAGGLDFS PV+K+F DP+ S +  V++ VSLTGFAL
Sbjct: 336  GDDSHYVAVIMELEARGAKVVPIFAGGLDFSGPVEKYFVDPV-SKQPIVNSAVSLTGFAL 394

Query: 533  VGGPARQDAPKAIEALKNLNVPYLVSLPLVFQTTEEWLDSELGVHPVQVALQVALPELDG 712
            VGGPARQD P+AIEALK L+VPYLV++PLVFQTTEEWL+S LG+HP+QVALQVALPELDG
Sbjct: 395  VGGPARQDHPRAIEALKKLDVPYLVAVPLVFQTTEEWLNSTLGLHPIQVALQVALPELDG 454

Query: 713  AMEPIVFAGRDSNTGKSHSLPDRIASLCARAVNWANLRKKRNAEKKLAVTVFSFPPDKGN 892
            AMEPIVFAGRD  TGKSH+L  R+  LC RA+ W  L++K  AEKKLA+TVFSFPPDKGN
Sbjct: 455  AMEPIVFAGRDPRTGKSHALHKRVEQLCIRAIRWGELKRKTKAEKKLAITVFSFPPDKGN 514

Query: 893  VGTAAYLNVFGSIYRVLKNLQREGYDVGALPPSEEDLIQSVLTQKEAKFNSTDLHIAYKM 1072
            VGTAAYLNVF SI+ VL++L+R+GY+V  LP + E LI+ ++  KEA+F+S +L++AYKM
Sbjct: 515  VGTAAYLNVFASIFSVLRDLKRDGYNVEGLPENAETLIEEIIHDKEAQFSSPNLNVAYKM 574

Query: 1073 KVDEYQKLCPYAEALEENWGKPPGTLNTNGQELLVYGRQYGNVFIGVQPTFGYEGDPMRL 1252
             V EYQ L PYA ALEENWGKPPG LN++G+ LLVYG+ YGNVFIGVQPTFGYEGDPMRL
Sbjct: 575  GVREYQDLTPYANALEENWGKPPGNLNSDGENLLVYGKAYGNVFIGVQPTFGYEGDPMRL 634

Query: 1253 LFSKSASPHHGFAAYYTFLEKIFKADAVLHFGTHGSLEFMPGKQVGMSGVCYPDSLIGTI 1432
            LFSKSASPHHGFAAYY+++EKIFKADAVLHFGTHGSLEFMPGKQVGMS  C+PDSLIG I
Sbjct: 635  LFSKSASPHHGFAAYYSYVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDACFPDSLIGNI 694

Query: 1433 PNLYYYAANNPSEATIAKRRSYANTI 1510
            PN+YYYAANNPSEATIAKRRSYANTI
Sbjct: 695  PNVYYYAANNPSEATIAKRRSYANTI 720

 Score =  248 bits (634), Expect(2) = 0.0
 Identities = 132/236 (55%), Positives = 172/236 (71%), Gaps = 1/236 (0%)
 Frame = +3

Query: 1512 AYLTPPAENAGLYKGLKELKELISSYQGMRESGRAEQICATIIETAKLCNLDRDVTLPDA 1691
            +YLTPPAENAGLYKGLK+L ELISSYQ ++++GR  QI ++II TAK CNLD+DV LPD 
Sbjct: 721  SYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVDLPD- 779

Query: 1692 DAKDLTMDMRDSVVGQVYRKLMEIESRLLPCGLHVVGCPPTAEEAVATLVNIAELDRPDN 1871
            +  +L+   RDSVVG+VY K+MEIESRLLPCGLHV+G PP+A EAVATLVNIA LDRP++
Sbjct: 780  EGLELSPKDRDSVVGKVYSKIMEIESRLLPCGLHVIGEPPSAMEAVATLVNIAALDRPED 839

Query: 1872 NPPIKGMPGILARAIGRDIESIYSGNNKGVLADVDQLQRITEASRTCVREFVKDRTGLNG 2051
               I  +P ILA  +GR+IE +Y G++KG+L+DV+ L+ IT+ASR  V  FV+  T   G
Sbjct: 840  E--ISALPSILAECVGREIEDVYRGSDKGILSDVELLKEITDASRGAVSAFVEKTTNSKG 897

Query: 2052 RIGTNWITNLLKFTGFYV-DPWVRGLQNGEFASANREELITLFNYLEFCLTQVVKD 2216
            ++  +    L    GF + +PWV  L N +F  ANR++L T+F +L  CL  VV D
Sbjct: 898  QV-VDVSDKLTSLLGFGINEPWVEYLSNTKFYRANRDKLRTVFGFLGECLKLVVMD 952

>gb|AAL79577.1| AT5g13630/MSH12_9 [Arabidopsis thaliana]
          Length = 1381

 Score =  759 bits (1960), Expect(2) = 0.0
 Identities = 365/506 (72%), Positives = 430/506 (84%), Gaps = 3/506 (0%)
 Frame = +2

Query: 2    KLVRTLPKVLKYLPSDKAQDAKNFVNSLQYWLGGNSDNLENLLLNTVSNYVPALKGVDFS 181
            KLVRTLPK LKYLPSDKAQDA+ ++ SLQ+WLGG+ DNL+N +     +YVPALKGV   
Sbjct: 216  KLVRTLPKGLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFVKMISGSYVPALKGVKIE 275

Query: 182  VAEPTAYPDVGIWHPLASGMYEDLKEYLNWYDTRKDM---VFAKDAPVIGLVLQRSHLVT 352
             ++P  + D GIWHPLA  MY+D+KEY NWYDTR+D    +  KDA V+GLVLQRSH+VT
Sbjct: 276  YSDPVLFLDTGIWHPLAPTMYDDVKEYWNWYDTRRDTNDSLKRKDATVVGLVLQRSHIVT 335

Query: 353  GDEGHYSGVVAELESRGAKVIPVFAGGLDFSAPVKKFFYDPLGSGRTFVDTVVSLTGFAL 532
            GD+ HY  V+ ELE+RGAKV+P+FAGGLDFS PV+K+F DP+ S +  V++ VSLTGFAL
Sbjct: 336  GDDSHYVAVIMELEARGAKVVPIFAGGLDFSGPVEKYFVDPV-SKQPIVNSAVSLTGFAL 394

Query: 533  VGGPARQDAPKAIEALKNLNVPYLVSLPLVFQTTEEWLDSELGVHPVQVALQVALPELDG 712
            VGGPARQD P+AIEALK L+VPYLV++PLVFQTTEEWL+S LG+HP+QVALQVALPELDG
Sbjct: 395  VGGPARQDHPRAIEALKKLDVPYLVAVPLVFQTTEEWLNSTLGLHPIQVALQVALPELDG 454

Query: 713  AMEPIVFAGRDSNTGKSHSLPDRIASLCARAVNWANLRKKRNAEKKLAVTVFSFPPDKGN 892
            AMEPIVFAGRD  TGKSH+L  R+  LC RA+ W  L++K  AEKKLA+TVFSFPPDKGN
Sbjct: 455  AMEPIVFAGRDPRTGKSHALHKRVEQLCIRAIRWGELKRKTKAEKKLAITVFSFPPDKGN 514

Query: 893  VGTAAYLNVFGSIYRVLKNLQREGYDVGALPPSEEDLIQSVLTQKEAKFNSTDLHIAYKM 1072
            VGTAAYLNVF SI+ VL++L+R+GY+V  LP + E LI+ ++  KEA+F+S +L++AYKM
Sbjct: 515  VGTAAYLNVFASIFSVLRDLKRDGYNVEGLPENAETLIEEIIHDKEAQFSSPNLNVAYKM 574

Query: 1073 KVDEYQKLCPYAEALEENWGKPPGTLNTNGQELLVYGRQYGNVFIGVQPTFGYEGDPMRL 1252
             V EYQ L PYA ALEENWGKPPG LN++G+ LLVYG+ YGNVFIGVQPTFGYEGDPMRL
Sbjct: 575  GVREYQDLTPYANALEENWGKPPGNLNSDGENLLVYGKAYGNVFIGVQPTFGYEGDPMRL 634

Query: 1253 LFSKSASPHHGFAAYYTFLEKIFKADAVLHFGTHGSLEFMPGKQVGMSGVCYPDSLIGTI 1432
            LFSKSASPHHGFAAYY+++EKIFKADAVLHFGTHGSLEFMPGKQVGMS  C+PDSLIG I
Sbjct: 635  LFSKSASPHHGFAAYYSYVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDACFPDSLIGNI 694

Query: 1433 PNLYYYAANNPSEATIAKRRSYANTI 1510
            PN+YYYAANNPSEATIAKRRSYANTI
Sbjct: 695  PNVYYYAANNPSEATIAKRRSYANTI 720

 Score =  248 bits (634), Expect(2) = 0.0
 Identities = 132/236 (55%), Positives = 172/236 (71%), Gaps = 1/236 (0%)
 Frame = +3

Query: 1512 AYLTPPAENAGLYKGLKELKELISSYQGMRESGRAEQICATIIETAKLCNLDRDVTLPDA 1691
            +YLTPPAENAGLYKGLK+L ELISSYQ ++++GR  QI ++II TAK CNLD+DV LPD 
Sbjct: 721  SYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVDLPD- 779

Query: 1692 DAKDLTMDMRDSVVGQVYRKLMEIESRLLPCGLHVVGCPPTAEEAVATLVNIAELDRPDN 1871
            +  +L+   RDSVVG+VY K+MEIESRLLPCGLHV+G PP+A EAVATLVNIA LDRP++
Sbjct: 780  EGLELSPKDRDSVVGKVYSKIMEIESRLLPCGLHVIGEPPSAMEAVATLVNIAALDRPED 839

Query: 1872 NPPIKGMPGILARAIGRDIESIYSGNNKGVLADVDQLQRITEASRTCVREFVKDRTGLNG 2051
               I  +P ILA  +GR+IE +Y G++KG+L+DV+ L+ IT+ASR  V  FV+  T   G
Sbjct: 840  E--ISALPSILAECVGREIEDVYRGSDKGILSDVELLKEITDASRGAVSAFVEKTTNSKG 897

Query: 2052 RIGTNWITNLLKFTGFYV-DPWVRGLQNGEFASANREELITLFNYLEFCLTQVVKD 2216
            ++  +    L    GF + +PWV  L N +F  ANR++L T+F +L  CL  VV D
Sbjct: 898  QV-VDVSDKLTSLLGFGINEPWVEYLSNTKFYRANRDKLRTVFGFLGECLKLVVMD 952

>pir||S71288 protoporphyrin IX magnesium chelatase (EC 4.99.1.-) chlH -
            Arabidopsis thaliana gi|1154627|emb|CAA92802.1| magnesium
            chelatase subunit [Arabidopsis thaliana]
          Length = 1381

 Score =  759 bits (1960), Expect(2) = 0.0
 Identities = 365/506 (72%), Positives = 429/506 (84%), Gaps = 3/506 (0%)
 Frame = +2

Query: 2    KLVRTLPKVLKYLPSDKAQDAKNFVNSLQYWLGGNSDNLENLLLNTVSNYVPALKGVDFS 181
            KLVRTLPKVLKYLPSDKAQDA+ ++ SLQ+WLGG+ DNL+N +     +YVPALKGV   
Sbjct: 216  KLVRTLPKVLKYLPSDKAQDARLYILSLQFWLGGSPDNLQNFVKMISGSYVPALKGVKIE 275

Query: 182  VAEPTAYPDVGIWHPLASGMYEDLKEYLNWYDTRKDM---VFAKDAPVIGLVLQRSHLVT 352
             ++P  + D GIWHPLA  MY+D+KEY NWYDTR+D    +  KDA V+GLVLQRSH+VT
Sbjct: 276  YSDPVLFLDTGIWHPLAPTMYDDVKEYWNWYDTRRDTNDSLKRKDATVVGLVLQRSHIVT 335

Query: 353  GDEGHYSGVVAELESRGAKVIPVFAGGLDFSAPVKKFFYDPLGSGRTFVDTVVSLTGFAL 532
            GD+ HY  V+ ELE+RGAKV+P+FAGGLDFS PV+K+F DP+ S +  V++ VSLTGFAL
Sbjct: 336  GDDSHYVAVIMELEARGAKVVPIFAGGLDFSGPVEKYFVDPV-SKQPIVNSAVSLTGFAL 394

Query: 533  VGGPARQDAPKAIEALKNLNVPYLVSLPLVFQTTEEWLDSELGVHPVQVALQVALPELDG 712
            VGGPARQD P+AIEALK L+VPYLV++PLVFQTTEEWL S LG+HP+QVALQVALPELDG
Sbjct: 395  VGGPARQDHPRAIEALKKLDVPYLVAVPLVFQTTEEWLKSTLGLHPIQVALQVALPELDG 454

Query: 713  AMEPIVFAGRDSNTGKSHSLPDRIASLCARAVNWANLRKKRNAEKKLAVTVFSFPPDKGN 892
            AMEPIVFAGRD  TGKSH+L  R+  LC RA+ W  L++K  AEKKLA+TVFSFPPDKGN
Sbjct: 455  AMEPIVFAGRDPRTGKSHALHKRVEQLCIRAIRWGELKRKTKAEKKLAITVFSFPPDKGN 514

Query: 893  VGTAAYLNVFGSIYRVLKNLQREGYDVGALPPSEEDLIQSVLTQKEAKFNSTDLHIAYKM 1072
            VGTAAYLNVF SI+ VL++L+R+GY+V  LP + E LI+ ++  KEA+F+S +L++AYKM
Sbjct: 515  VGTAAYLNVFASIFSVLRDLKRDGYNVEGLPENAETLIEEIIHDKEAQFSSPNLNVAYKM 574

Query: 1073 KVDEYQKLCPYAEALEENWGKPPGTLNTNGQELLVYGRQYGNVFIGVQPTFGYEGDPMRL 1252
             V EYQ L PYA  LEENWGKPPG LN++G+ LLVYG+ YGNVFIGVQPTFGYEGDPMRL
Sbjct: 575  GVREYQDLTPYANPLEENWGKPPGNLNSDGENLLVYGKAYGNVFIGVQPTFGYEGDPMRL 634

Query: 1253 LFSKSASPHHGFAAYYTFLEKIFKADAVLHFGTHGSLEFMPGKQVGMSGVCYPDSLIGTI 1432
            LFSKSASPHHGFAAYY+++EKIFKADAVLHFGTHGSLEFMPGKQVGMS  C+PDSLIG I
Sbjct: 635  LFSKSASPHHGFAAYYSYVEKIFKADAVLHFGTHGSLEFMPGKQVGMSDACFPDSLIGNI 694

Query: 1433 PNLYYYAANNPSEATIAKRRSYANTI 1510
            PN+YYYAANNPSEATIAKRRSYANTI
Sbjct: 695  PNVYYYAANNPSEATIAKRRSYANTI 720

 Score =  247 bits (631), Expect(2) = 0.0
 Identities = 131/236 (55%), Positives = 172/236 (72%), Gaps = 1/236 (0%)
 Frame = +3

Query: 1512 AYLTPPAENAGLYKGLKELKELISSYQGMRESGRAEQICATIIETAKLCNLDRDVTLPDA 1691
            +YLTPPAENAGLYKGLK++ ELISSYQ ++++GR  QI ++II TAK CNLD+DV LPD 
Sbjct: 721  SYLTPPAENAGLYKGLKQVSELISSYQSLKDTGRGPQIVSSIISTAKQCNLDKDVDLPD- 779

Query: 1692 DAKDLTMDMRDSVVGQVYRKLMEIESRLLPCGLHVVGCPPTAEEAVATLVNIAELDRPDN 1871
            +  +L+   RDSVVG+VY K+MEIESRLLPCGLHV+G PP+A EAVATLVNIA LDRP++
Sbjct: 780  EGLELSPKDRDSVVGKVYSKIMEIESRLLPCGLHVIGEPPSAMEAVATLVNIAALDRPED 839

Query: 1872 NPPIKGMPGILARAIGRDIESIYSGNNKGVLADVDQLQRITEASRTCVREFVKDRTGLNG 2051
               I  +P ILA  +GR+IE +Y G++KG+L+DV+ L+ IT+ASR  V  FV+  T   G
Sbjct: 840  E--ISALPSILAECVGREIEDVYRGSDKGILSDVELLKEITDASRGAVSAFVEKTTNSKG 897

Query: 2052 RIGTNWITNLLKFTGFYV-DPWVRGLQNGEFASANREELITLFNYLEFCLTQVVKD 2216
            ++  +    L    GF + +PWV  L N +F  ANR++L T+F +L  CL  VV D
Sbjct: 898  QV-VDVSDKLTSLLGFGINEPWVEYLSNTKFYRANRDKLRTVFGFLGECLKLVVMD 952



EST assemble image


clone accession position
1 MXL075c08_r BP097411 1 292
2 CL08h10_r AV393532 175 690
3 MXL002e06_r BP093040 289 645
4 MXL094c05_r BP098497 490 858
5 MXL015d09_r BP093906 519 855
6 MXL041f11_r BP095431 749 1134
7 HCL060d09_r AV642917 751 1270
8 MXL047g07_r BP095811 763 1270
9 MXL079g06_r BP097692 774 1185
10 HCL065f11_r AV643211 797 1110
11 MXL055b10_r BP096241 830 1006
12 HCL065g10_r AV643218 938 1518
13 LCL044f08_r AV628623 1024 1308
14 LCL065b12_r AV629752 1056 1608
15 HCL043d01_r AV641976 1111 1633
16 HCL058a12_r AV642794 1144 1625
17 LCL022d01_r AV627184 1171 1427
18 MXL069b01_r BP097041 1320 1801
19 CL61e08_r AV396346 1336 1847
20 LCL088g02_r AV631097 1398 1876
21 HCL080g04_r AV644041 1407 2012
22 HCL041a10_r AV641832 1853 2222




Chlamydomonas reinhardtii
Kazusa DNA Research Institute