Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000148A_C01 KCC000148A_c01
(552 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD39598.1|AC007858_12 10A19I.13 [Oryza sativa] 39 0.047
pir||JQ0405 hypothetical 119.5K protein (uvrA region) - Micrococ... 38 0.10
ref|ZP_00090649.1| hypothetical protein [Azotobacter vinelandii] 37 0.14
ref|NP_649228.1| CG5195-PA [Drosophila melanogaster] gi|23094164... 37 0.18
ref|NP_775611.1| hypothetical protein 4930595M18 [Mus musculus] ... 37 0.18
>gb|AAD39598.1|AC007858_12 10A19I.13 [Oryza sativa]
Length = 539
Score = 38.9 bits (89), Expect = 0.047
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Frame = -1
Query: 303 RRQRRRCFRAWSRGPRRRGRENAHASRRPAPRG------GPAARAGAWSP 172
RR+ R R SR PRR+ R +A RRP+PR GPAAR W P
Sbjct: 417 RRRPREETRGDSRPPRRQRRHSARLHRRPSPRVGAAAPLGPAARRQIWPP 466
>pir||JQ0405 hypothetical 119.5K protein (uvrA region) - Micrococcus luteus
Length = 1106
Score = 37.7 bits (86), Expect = 0.10
Identities = 28/60 (46%), Positives = 36/60 (59%), Gaps = 5/60 (8%)
Frame = +2
Query: 140 RLSESDHYVS--QGDQAPARAAGPPRGAGRLEACAFSRPRR---RGPRDQARKHRRL*RR 304
R +DH V+ + QAPARA+ PRG G+ A ++PRR RGPRD+ R RL RR
Sbjct: 959 RAGRADHGVALRRHPQAPARAS-VPRGQGQHGAHHRAQPRRDQERGPRDRPRPGGRLRRR 1017
>ref|ZP_00090649.1| hypothetical protein [Azotobacter vinelandii]
Length = 441
Score = 37.4 bits (85), Expect = 0.14
Identities = 22/48 (45%), Positives = 25/48 (51%), Gaps = 2/48 (4%)
Frame = -1
Query: 303 RRQRRRCFRAWSR--GPRRRGRENAHASRRPAPRGGPAARAGAWSPCE 166
RR RRR +RAW R G R R R H +RRP P G A PC+
Sbjct: 363 RRGRRRAYRAWLRRGGQRARHRPVLHDARRP-PEGRQPPSAPCHGPCQ 409
>ref|NP_649228.1| CG5195-PA [Drosophila melanogaster] gi|23094164|gb|AAF51605.2|
CG5195-PA [Drosophila melanogaster]
Length = 1535
Score = 37.0 bits (84), Expect = 0.18
Identities = 31/111 (27%), Positives = 46/111 (40%), Gaps = 11/111 (9%)
Frame = +1
Query: 253 STGATRPGTEASTSLTSPSNQNSTSVRIL--RYPD----GHERTIYYPAEVVSAAEPELK 414
ST TR T ST+ +P+ N++S L +Y D T+ P +V E
Sbjct: 1299 STTTTRSTTTTSTTQVTPAENNASSSTELDSQYDDEDLEAQSVTLLRPPPLVQTTTAETI 1358
Query: 415 VELEPEE-----VNWSLWTQTDEDESTAWNECSLAGAACVVADPGPLSEEL 552
+ + P E + W T +S + N+ +LAG V P P S L
Sbjct: 1359 LLIPPAEEHVAQIKSRSWVTTTTPQSPSDNQVTLAGPTSTVPPPPPASPPL 1409
>ref|NP_775611.1| hypothetical protein 4930595M18 [Mus musculus]
gi|26325758|dbj|BAC26633.1| unnamed protein product [Mus
musculus]
Length = 829
Score = 37.0 bits (84), Expect = 0.18
Identities = 23/64 (35%), Positives = 30/64 (45%), Gaps = 2/64 (3%)
Frame = +1
Query: 247 ATSTGATRPGTEASTS--LTSPSNQNSTSVRILRYPDGHERTIYYPAEVVSAAEPELKVE 420
AT T TRP T + T L SP N + S +Y + ER + YP + L E
Sbjct: 242 ATHTLITRPSTRSQTRKRLRSPQNSSENSKLERKYAENKERQMEYPQSPSIIKKTYLSKE 301
Query: 421 LEPE 432
+EPE
Sbjct: 302 IEPE 305
