KCC000146A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000146A_C01 KCC000146A_c01
cCCCGAGGAATTATTCGATAAAGATAAGCTTACATTATGAAGAGCAGCATATTACAGCCG
TATGGGTCTACTTGACAGTAAAATTTGAAGAGCATTGGAAGCCTGTTGATGTAGAGGTCG
AGTTTAGATGCAAGTTCAAGGAGCGAAAGGTGGATGGGTAGGTTATATAGGGATATAGCA
CAGAGATATATAGCAAAGAGATACTTTTGAGCAATGTTTGTGGAAGCGGTATTCGCAATA
TTTTAGTAGCTCGTTACAGTCCGGTGCGTTTTTGGTTTTTTGAAAGTGCGTCTTCAGAGC
GCTTTTGGTTTTCAAAAGCGCTCTGAAGTTCCTATACTTTCTAGAGAATAGGAACTTCGG
AATAGGAACTTCAAAGCGTTTCCGAAAACGAGCGCTTCCGAAAATGCAACGCGAGCTGCG
CACATACAGCTCACTGTTCACGTCGCACCTATATCTGCGTGTTGCCTGTATATATATATA
CATGAGAAGAACGGCATAGTGCGTGTTTATGCTTAAATGCGTACTTATATGCGTCTATTT
ATGTAGGATGAAAGGTAGTCTAGT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000146A_C01 KCC000146A_c01
         (564 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|P33440|GAC_YEAST GLYOXALASE I ACTIVITY-ENHANCING PROTEIN GAC       225  3e-58
pir||S22872 glyoxalase I activity-enhancing protein GAC - yeast ...   219  2e-56
ref|NP_040489.1| Rep 1 protein [Saccharomyces cerevisiae] gi|132...   105  4e-22
pir||S40417 REP1 protein - yeast (Saccharomyces cerevisiae) (ATC...   101  8e-21
pir||S11187 REP1 protein - yeast (Saccharomyces cerevisiae) 2 mu...   101  8e-21

>sp|P33440|GAC_YEAST GLYOXALASE I ACTIVITY-ENHANCING PROTEIN GAC
          Length = 106

 Score =  225 bits (574), Expect = 3e-58
 Identities = 106/106 (100%), Positives = 106/106 (100%)
 Frame = -1

Query: 483 MYIYIQATRRYRCDVNSELYVRSSRCIFGSARFRKRFEVPIPKFLFSRKYRNFRALLKTK 304
           MYIYIQATRRYRCDVNSELYVRSSRCIFGSARFRKRFEVPIPKFLFSRKYRNFRALLKTK
Sbjct: 1   MYIYIQATRRYRCDVNSELYVRSSRCIFGSARFRKRFEVPIPKFLFSRKYRNFRALLKTK 60

Query: 303 SALKTHFQKTKNAPDCNELLKYCEYRFHKHCSKVSLCYISLCYIPI 166
           SALKTHFQKTKNAPDCNELLKYCEYRFHKHCSKVSLCYISLCYIPI
Sbjct: 61  SALKTHFQKTKNAPDCNELLKYCEYRFHKHCSKVSLCYISLCYIPI 106

>pir||S22872 glyoxalase I activity-enhancing protein GAC - yeast  (Saccharomyces
           cerevisiae) 2-mu plasmid
          Length = 106

 Score =  219 bits (558), Expect = 2e-56
 Identities = 104/106 (98%), Positives = 104/106 (98%)
 Frame = -1

Query: 483 MYIYIQATRRYRCDVNSELYVRSSRCIFGSARFRKRFEVPIPKFLFSRKYRNFRALLKTK 304
           MYIYIQAT RYRCDVNSELYVRSSRCIFGSARFRKRFEVPIPKFLFSRKYRNFRALLKTK
Sbjct: 1   MYIYIQATPRYRCDVNSELYVRSSRCIFGSARFRKRFEVPIPKFLFSRKYRNFRALLKTK 60

Query: 303 SALKTHFQKTKNAPDCNELLKYCEYRFHKHCSKVSLCYISLCYIPI 166
           SALKTHFQKTKNAPDCNELLK CEYRFHKHCSKVSLCYISLCYIPI
Sbjct: 61  SALKTHFQKTKNAPDCNELLKTCEYRFHKHCSKVSLCYISLCYIPI 106

>ref|NP_040489.1| Rep 1 protein [Saccharomyces cerevisiae]
           gi|132332|sp|P03871|REP1_YEAST TRANS-ACTING FACTOR B
           (REP1) (PROTEIN BAKER) gi|76334|pir||PDBYB REP1 protein
           - yeast (Saccharomyces cerevisiae) (strain A364A D5)
           2-mu plasmid gi|4183|emb|CAA24632.1| protein Baker
           [Saccharomyces cerevisiae] gi|172192|gb|AAB59341.1| Rep
           1 protein [Saccharomyces cerevisiae]
          Length = 373

 Score =  105 bits (262), Expect = 4e-22
 Identities = 48/48 (100%), Positives = 48/48 (100%)
 Frame = +3

Query: 15  SIKISLHYEEQHITAVWVYLTVKFEEHWKPVDVEVEFRCKFKERKVDG 158
           SIKISLHYEEQHITAVWVYLTVKFEEHWKPVDVEVEFRCKFKERKVDG
Sbjct: 326 SIKISLHYEEQHITAVWVYLTVKFEEHWKPVDVEVEFRCKFKERKVDG 373

>pir||S40417 REP1 protein - yeast (Saccharomyces cerevisiae) (ATCC 7754) 2 mu
           plasmid gi|4307|emb|CAA39080.1| REP1 protein
           [Saccharomyces cerevisiae]
          Length = 382

 Score =  101 bits (251), Expect = 8e-21
 Identities = 46/47 (97%), Positives = 47/47 (99%)
 Frame = +3

Query: 15  SIKISLHYEEQHITAVWVYLTVKFEEHWKPVDVEVEFRCKFKERKVD 155
           SIKISLHYEEQHITAVWVYLTVKFEEHWKPVDVEVEFRCKFKERKV+
Sbjct: 335 SIKISLHYEEQHITAVWVYLTVKFEEHWKPVDVEVEFRCKFKERKVN 381

>pir||S11187 REP1 protein - yeast (Saccharomyces cerevisiae) 2 mu plasmid Scp3
           gi|172380|gb|AAA34966.1| rep1 protein
          Length = 380

 Score =  101 bits (251), Expect = 8e-21
 Identities = 46/47 (97%), Positives = 47/47 (99%)
 Frame = +3

Query: 15  SIKISLHYEEQHITAVWVYLTVKFEEHWKPVDVEVEFRCKFKERKVD 155
           SIKISLHYEEQHITAVWVYLTVKFEEHWKPVDVEVEFRCKFKERKV+
Sbjct: 333 SIKISLHYEEQHITAVWVYLTVKFEEHWKPVDVEVEFRCKFKERKVN 379



EST assemble image


clone accession position
1 CL48c09_r AV395788 1 540
2 CL59g04_r AV397894 2 546
3 CL57d02_r AV396285 2 548
4 CL07a08_r AV393449 2 545
5 HCL008b02_r AV639970 2 552
6 CL52f12_r AV395848 2 539
7 CL48b09_r AV395786 2 538
8 LCL008c06_r AV626388 2 537
9 LCL086d05_r AV630922 2 536
10 LCL068g08_r AV629907 2 524
11 CL61a02_r AV396316 2 565
12 LCL068g09_r AV629908 2 525
13 HCL045a08_r AV642070 2 316
14 LCL022c04_r AV627176 2 514
15 CL24d01_r AV394406 2 505
16 LCL069h09_r AV629956 2 492
17 LCL098d07_r AV631699 2 487
18 LCL053c10_r AV629157 2 486
19 CL23g09_r AV394511 2 470
20 CL17c04_r AV394121 2 538
21 CL17d08_r AV394125 2 515
22 CL73g11_r AV396966 2 494
23 MXL003a12_r AV396966 2 417




Chlamydomonas reinhardtii
Kazusa DNA Research Institute