Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000130A_C01 KCC000130A_c01
(537 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAH36187.1| SRRM1 protein [Homo sapiens] 43 0.003
dbj|BAC10714.1| P0431H09.26 [Oryza sativa (japonica cultivar-gro... 41 0.011
ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-... 40 0.015
ref|NP_005830.1| Ser/Arg-related nuclear matrix protein (plenty ... 40 0.019
dbj|BAB89917.1| P0700A11.18 [Oryza sativa (japonica cultivar-gro... 40 0.019
>gb|AAH36187.1| SRRM1 protein [Homo sapiens]
Length = 904
Score = 42.7 bits (99), Expect = 0.003
Identities = 47/165 (28%), Positives = 69/165 (41%), Gaps = 25/165 (15%)
Frame = -2
Query: 521 TQPPSRARAAAVGHIVHSEAESASVLTRISRYQRAKATPSKRIKLSHPCTLDTSSHAAAR 342
TQP SR+R+ + S + S + R R + +P +R + R
Sbjct: 274 TQPRSRSRSKSRSR-TRSRSPSHTRPRRRHRSRSRSYSPRRRPS--------PRRRPSPR 324
Query: 341 TRSFIKPPAAPPPPGRERRSCARLKHQRESSHTVS-----------------KPLQTLSP 213
R+ PP PPP R RRS + ++ +R SS ++S P +T SP
Sbjct: 325 RRT---PPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSP 381
Query: 212 PKHCARTRCVFPRASPPR-------PCTGGASSRHR-APHQMHTT 102
P+ +TR + P ASPPR P T +RH P Q + T
Sbjct: 382 PR---KTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQSNRT 423
Score = 33.5 bits (75), Expect = 1.8
Identities = 30/116 (25%), Positives = 40/116 (33%), Gaps = 8/116 (6%)
Frame = -2
Query: 440 RISRYQRAKATPSKRIKLSHPCTLDTSSHAAARTRSFIKPPAAPPP--------PGRERR 285
R S + A +P KR K + P S + TR P APPP P R R
Sbjct: 522 RHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT 581
Query: 284 SCARLKHQRESSHTVSKPLQTLSPPKHCARTRCVFPRASPPRPCTGGASSRHRAPH 117
+ + S S P+Q P + R P P R + + R H
Sbjct: 582 PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 637
>dbj|BAC10714.1| P0431H09.26 [Oryza sativa (japonica cultivar-group)]
Length = 199
Score = 40.8 bits (94), Expect = 0.011
Identities = 33/99 (33%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Frame = -3
Query: 370 WTLLVTRRHGHVLS*SRPPRPRRPAA-NAAAVPASSISARAHTQFLNH---CKLSHHPST 203
++L+V R V RPPRP P+A + AA A+++ A A H C+ PS+
Sbjct: 11 FSLVVARDRTAVRGLRRPPRPPPPSALSPAAASAAAVRAIARHDRRRHSRRCRPRPPPSS 70
Query: 202 AHARAACS-------LARRHHGRAPAGHPPATGHPTKCT 107
A A CS +ARR R P PP+ P T
Sbjct: 71 ASPAAVCSVTGHGHAVARRPRRRPPRPPPPSALSPAAAT 109
>ref|NP_058079.1| Ser/Arg-related nuclear matrix protein; plenty-of-prolines-101;
serine/arginine repetitive matrix protein 1 [Mus
musculus] gi|3153821|gb|AAC17422.1|
plenty-of-prolines-101; POP101; SH3-philo-protein [Mus
musculus]
Length = 897
Score = 40.4 bits (93), Expect = 0.015
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 25/99 (25%)
Frame = -2
Query: 323 PPAAPPPPGRERRSCARLKHQRESSHTVS-----------------KPLQTLSPPKHCAR 195
PP PPP R RRS + + +R SS ++S P +T SPP+ +
Sbjct: 326 PPRRMPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPR---K 382
Query: 194 TRCVFPRASPPR-------PCTGGASSRHR-APHQMHTT 102
TR + P ASPPR P T +RH P Q + T
Sbjct: 383 TRRLSPSASPPRRRHRPSSPATPPPKTRHSPTPQQSNRT 421
Score = 33.9 bits (76), Expect = 1.4
Identities = 31/122 (25%), Positives = 43/122 (34%), Gaps = 10/122 (8%)
Frame = -2
Query: 452 SVLTRISRYQRAKATPSKRIKLSHPCTLDTSSHAAARTRSFIKPPAAPPPPGRERRSCAR 273
S +T+ SR +R+ + P R + R+ S PP PPPP R RRS
Sbjct: 550 SPVTKSSRRRRSPSPPPARRR---------------RSPSPAPPPPPPPPPPRRRRSPTP 594
Query: 272 LKHQR----------ESSHTVSKPLQTLSPPKHCARTRCVFPRASPPRPCTGGASSRHRA 123
+R S S P+Q P + R P P R + + R
Sbjct: 595 PPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRV 654
Query: 122 PH 117
H
Sbjct: 655 SH 656
>ref|NP_005830.1| Ser/Arg-related nuclear matrix protein (plenty of prolines 101-l;
Ser/Arg-related nuclear matrix protein (plenty of
prolines 101-like) [Homo sapiens]
gi|3005587|gb|AAC09321.1| Ser/Arg-related nuclear matrix
protein [Homo sapiens]
gi|33150824|gb|AAP97290.1|AF419855_1 Ser/Arg-related
nuclear matrix protein [Homo sapiens]
Length = 820
Score = 40.0 bits (92), Expect = 0.019
Identities = 26/72 (36%), Positives = 36/72 (49%), Gaps = 17/72 (23%)
Frame = -2
Query: 323 PPAAPPPPGRERRSCARLKHQRESSHTVS-----------------KPLQTLSPPKHCAR 195
PP PPP R RRS + ++ +R SS ++S P +T SPP+ +
Sbjct: 327 PPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPR---K 383
Query: 194 TRCVFPRASPPR 159
TR + P ASPPR
Sbjct: 384 TRRLSPSASPPR 395
Score = 33.5 bits (75), Expect = 1.8
Identities = 30/116 (25%), Positives = 40/116 (33%), Gaps = 8/116 (6%)
Frame = -2
Query: 440 RISRYQRAKATPSKRIKLSHPCTLDTSSHAAARTRSFIKPPAAPPP--------PGRERR 285
R S + A +P KR K + P S + TR P APPP P R R
Sbjct: 520 RHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRT 579
Query: 284 SCARLKHQRESSHTVSKPLQTLSPPKHCARTRCVFPRASPPRPCTGGASSRHRAPH 117
+ + S S P+Q P + R P P R + + R H
Sbjct: 580 PSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSH 635
>dbj|BAB89917.1| P0700A11.18 [Oryza sativa (japonica cultivar-group)]
Length = 379
Score = 40.0 bits (92), Expect = 0.019
Identities = 23/68 (33%), Positives = 34/68 (49%), Gaps = 4/68 (5%)
Frame = -2
Query: 344 RTRSFIKPPAAPPPPGRERRSCARLKHQRESSHTVSKPLQTLSPPKH----CARTRCVFP 177
R R ++P APPPP +R + A++ + T+ + L+PP H +R
Sbjct: 214 RERRSLEPSRAPPPPSHQRTAAAKVDSWPPLAVTLP---EFLAPPSHWPLPTFPSRRTHA 270
Query: 176 RASPPRPC 153
R SPPRPC
Sbjct: 271 RGSPPRPC 278
