>KCC000126A_C01 KCC000126A_c01
tagtGTTCCACAAAAGGCATTAGCATACATCTTCAGCTAGAACGGGCCGTCCCGGAGCGT
AAAAATGTCTGAGAGCAAGGACCAGCTGAAGGAGAAGCTCAAGGCGGACCCCTCGTTCCG
TGCTGAGCTCAAGGACCGCATTAAGAATGCCCTGCTGTCCAAGGTGCCCGCGTCGGTGCC
TATCTCCTACAATTTCGACAGCTACATGCTCACGGAGGTGCAGCCGGGCCAGCTGCGCGT
TCTGGAGGTGGACGAGCGCCTCGTGCTGCCCACCAACACCCTCATCCGTCTGCTGGTGAC
CGCCTCGGATGTGCTGCACAGCTGGGCTGTGCCTGCTCTGGGCGTGAAGATGGACGCGGT
GCCGGGTCGCCTGAACCAGGTCTGGATGTCCATCAACCGTGAGGGCGTCTTCTACGGCCA
GTGCTCTGAGCTCTGCGGCGCGAACCACTCGTTCATGCCTATCGTGGTGGAGGCCATCAG
CCCCCGTCAGTTCCTGACCGAGTACGTGAAGAAGTGGATCTCGTAATCTGGTATGGAGCT
CTGGACAGGAGAGCAGCGGTCCCTCAGGGACGTTACAGCTTAACATCTGACCTGTGACCT
GTGTGATTGTGAGTAGAGATAGTTCAACCAGACGTAGGTAGGATATATCCGATGTTGGAA
TGCGGTGACGTTTGGGGAAGGCGCCGGTGGGGAGGGTGTGCGCCGTGGGTGCGTGCCGCC
GGGCGTGCCGGCTTGGTGGTGCTGCAACGTGGCACCTCGGGACCTGGATGCTGCCTATCG
GCCGCCGACCGACAAGACTTTTCAGATAGATGCTTGGTAACGTGAGAACTGTAGCGCAGT
AGGTATGTGGCGGCTTGGGACACGAGCAGATGCTCTGTGGAGTnGTAGGTCCGTATGTGT
CGGACGTGGCG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000126A_C01 KCC000126A_c01
         (911 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK32117.1|AF305543_1 cytochrome c oxidase subunit II [Chlamy...   305  5e-82
dbj|BAB21507.1| cytochrome c oxidase subunit 2 [Chlamydomonas re...   301  1e-80
gb|AAK32114.1|AF305540_1 cytochrome c oxidase subunit II [Chlamy...   298  7e-80
gb|AAK30366.1|AF305079_1 cytochrome c oxidase subunit II [Polyto...   276  3e-73
gb|AAO27881.1| cytochrome c oxidase subunit IIB [Scenedesmus obl...   176  5e-43

>gb|AAK32117.1|AF305543_1 cytochrome c oxidase subunit II [Chlamydomonas reinhardtii]
          Length = 153

 Score =  305 bits (782), Expect = 5e-82
 Identities = 153/153 (100%), Positives = 153/153 (100%)
 Frame = +2

Query: 65  MSESKDQLKEKLKADPSFRAELKDRIKNALLSKVPASVPISYNFDSYMLTEVQPGQLRVL 244
           MSESKDQLKEKLKADPSFRAELKDRIKNALLSKVPASVPISYNFDSYMLTEVQPGQLRVL
Sbjct: 1   MSESKDQLKEKLKADPSFRAELKDRIKNALLSKVPASVPISYNFDSYMLTEVQPGQLRVL 60

Query: 245 EVDERLVLPTNTLIRLLVTASDVLHSWAVPALGVKMDAVPGRLNQVWMSINREGVFYGQC 424
           EVDERLVLPTNTLIRLLVTASDVLHSWAVPALGVKMDAVPGRLNQVWMSINREGVFYGQC
Sbjct: 61  EVDERLVLPTNTLIRLLVTASDVLHSWAVPALGVKMDAVPGRLNQVWMSINREGVFYGQC 120

Query: 425 SELCGANHSFMPIVVEAISPRQFLTEYVKKWIS 523
           SELCGANHSFMPIVVEAISPRQFLTEYVKKWIS
Sbjct: 121 SELCGANHSFMPIVVEAISPRQFLTEYVKKWIS 153

>dbj|BAB21507.1| cytochrome c oxidase subunit 2 [Chlamydomonas reinhardtii]
          Length = 153

 Score =  301 bits (770), Expect = 1e-80
 Identities = 151/153 (98%), Positives = 151/153 (98%)
 Frame = +2

Query: 65  MSESKDQLKEKLKADPSFRAELKDRIKNALLSKVPASVPISYNFDSYMLTEVQPGQLRVL 244
           MSESKDQLKEKLKADPSFRAELKDRIKNALL KVPASVPISYNFDSYMLTEVQP QLRVL
Sbjct: 1   MSESKDQLKEKLKADPSFRAELKDRIKNALLPKVPASVPISYNFDSYMLTEVQPDQLRVL 60

Query: 245 EVDERLVLPTNTLIRLLVTASDVLHSWAVPALGVKMDAVPGRLNQVWMSINREGVFYGQC 424
           EVDERLVLPTNTLIRLLVTASDVLHSWAVPALGVKMDAVPGRLNQVWMSINREGVFYGQC
Sbjct: 61  EVDERLVLPTNTLIRLLVTASDVLHSWAVPALGVKMDAVPGRLNQVWMSINREGVFYGQC 120

Query: 425 SELCGANHSFMPIVVEAISPRQFLTEYVKKWIS 523
           SELCGANHSFMPIVVEAISPRQFLTEYVKKWIS
Sbjct: 121 SELCGANHSFMPIVVEAISPRQFLTEYVKKWIS 153

>gb|AAK32114.1|AF305540_1 cytochrome c oxidase subunit II [Chlamydomonas reinhardtii]
          Length = 149

 Score =  298 bits (764), Expect = 7e-80
 Identities = 149/149 (100%), Positives = 149/149 (100%)
 Frame = +2

Query: 77  KDQLKEKLKADPSFRAELKDRIKNALLSKVPASVPISYNFDSYMLTEVQPGQLRVLEVDE 256
           KDQLKEKLKADPSFRAELKDRIKNALLSKVPASVPISYNFDSYMLTEVQPGQLRVLEVDE
Sbjct: 1   KDQLKEKLKADPSFRAELKDRIKNALLSKVPASVPISYNFDSYMLTEVQPGQLRVLEVDE 60

Query: 257 RLVLPTNTLIRLLVTASDVLHSWAVPALGVKMDAVPGRLNQVWMSINREGVFYGQCSELC 436
           RLVLPTNTLIRLLVTASDVLHSWAVPALGVKMDAVPGRLNQVWMSINREGVFYGQCSELC
Sbjct: 61  RLVLPTNTLIRLLVTASDVLHSWAVPALGVKMDAVPGRLNQVWMSINREGVFYGQCSELC 120

Query: 437 GANHSFMPIVVEAISPRQFLTEYVKKWIS 523
           GANHSFMPIVVEAISPRQFLTEYVKKWIS
Sbjct: 121 GANHSFMPIVVEAISPRQFLTEYVKKWIS 149

>gb|AAK30366.1|AF305079_1 cytochrome c oxidase subunit II [Polytomella sp. 'Pringsheim
           198.80'] gi|13604157|gb|AAK32116.1|AF305542_1 cytochrome
           c oxidase subunit II [Polytomella sp. 'Pringsheim
           198.80']
          Length = 153

 Score =  276 bits (707), Expect = 3e-73
 Identities = 130/152 (85%), Positives = 147/152 (96%)
 Frame = +2

Query: 65  MSESKDQLKEKLKADPSFRAELKDRIKNALLSKVPASVPISYNFDSYMLTEVQPGQLRVL 244
           MS++KDQLKE+LKA PSFRAELKD++K ALLSKVPAS PI YNFDSYM+T+VQPGQLR+L
Sbjct: 1   MSDAKDQLKEQLKASPSFRAELKDKLKAALLSKVPASQPIQYNFDSYMVTDVQPGQLRML 60

Query: 245 EVDERLVLPTNTLIRLLVTASDVLHSWAVPALGVKMDAVPGRLNQVWMSINREGVFYGQC 424
           EVDERLVLPTNTL+RLLVTASDV+HSWAVP+LG+KMDA+PGRLNQ+W++INREGVFYGQC
Sbjct: 61  EVDERLVLPTNTLVRLLVTASDVIHSWAVPSLGIKMDAIPGRLNQIWLTINREGVFYGQC 120

Query: 425 SELCGANHSFMPIVVEAISPRQFLTEYVKKWI 520
           SE+CGANHSFMPIVVEAISPR FLTEYVKKWI
Sbjct: 121 SEICGANHSFMPIVVEAISPRAFLTEYVKKWI 152

>gb|AAO27881.1| cytochrome c oxidase subunit IIB [Scenedesmus obliquus]
          Length = 102

 Score =  176 bits (446), Expect = 5e-43
 Identities = 77/101 (76%), Positives = 96/101 (94%)
 Frame = +2

Query: 218 VQPGQLRVLEVDERLVLPTNTLIRLLVTASDVLHSWAVPALGVKMDAVPGRLNQVWMSIN 397
           V+PGQ+R+L+ DERLVLPTN+L+RLLVT+SDV+HSWAVP+LGVK+DA+PGRLNQVW++I 
Sbjct: 1   VEPGQIRLLDCDERLVLPTNSLVRLLVTSSDVIHSWAVPSLGVKIDAIPGRLNQVWITIQ 60

Query: 398 REGVFYGQCSELCGANHSFMPIVVEAISPRQFLTEYVKKWI 520
           R GVFYGQCSELCGANH+FMPIVVEA++PRQF+  Y+KKW+
Sbjct: 61  RPGVFYGQCSELCGANHAFMPIVVEAVTPRQFVQNYLKKWM 101

EST assemble image

clone accession position 1 LC066a10_r AV623596 1 496 2 HC055g01_r AV636142 5 451 3 MXL065b05_r BP096803 8 496 4 LC062f03_r AV623358 13 542 5 MXL012d06_r BP093710 19 258 6 MX064f04_r BP088599 21 353 7 LCL024g03_r AV627308 22 262 8 CL06a02_r AV393622 22 516 9 LC068b08_r AV623751 22 543 10 CM066h07_r AV390834 22 588 11 HC043d09_r AV635213 147 541 12 CL11h06_r AV393760 428 911

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