Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000122A_C01 KCC000122A_c01
(595 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF06353.1|AF199413_1 thymidine kinase [Pseudorabies virus] 37 0.21
gb|AAN05500.1| Hypothetical protein [Oryza sativa (japonica cult... 35 1.0
ref|ZP_00014388.1| hypothetical protein [Rhodospirillum rubrum] 35 1.0
gb|AAN86819.1| 62 kDa protein Tc-1 [Trypanosoma cruzi] 34 1.3
ref|NP_355646.1| AGR_C_4917p [Agrobacterium tumefaciens] gi|1793... 34 1.3
>gb|AAF06353.1|AF199413_1 thymidine kinase [Pseudorabies virus]
Length = 297
Score = 37.0 bits (84), Expect = 0.21
Identities = 29/100 (29%), Positives = 41/100 (41%)
Frame = +3
Query: 285 DLSMPLWALSSTLSLPRPSSI*ITAGYGAWSRAAATRCWSVRPCWHVVAWRPVPSCKCSH 464
+L P W +ST P+ A W+RA + C + PCW + R + +
Sbjct: 148 NLVWPRWTRTSTCGACAPAR----APGSTWTRACSRACATSTPCW---STRRATLARGAA 200
Query: 465 G*WVALQREGHQHPQTTGSASTASPAFETTSETPSTRAPT 584
G R P T S ST+S A T PS+R P+
Sbjct: 201 GATTGGARRASTRPCATASRSTSSAARAT---APSSRTPS 237
>gb|AAN05500.1| Hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 303
Score = 34.7 bits (78), Expect = 1.0
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = -3
Query: 479 CHPLAVRALAARNRTP--GHDVPARSNAPAACRRRARPSAISGCYLDGRGS 333
C P A R R+RTP G +S+APAA R P+ CY+ G G+
Sbjct: 101 CTPTARRLCGVRSRTPRRGQVGCFQSSAPAAARTPRTPTTQRACYVRGTGT 151
>ref|ZP_00014388.1| hypothetical protein [Rhodospirillum rubrum]
Length = 296
Score = 34.7 bits (78), Expect = 1.0
Identities = 29/78 (37%), Positives = 33/78 (42%)
Frame = +1
Query: 316 RLYRFHDPLPSR*QPDMALGRARRRHAAGAFDRAGTSWPGVRFRAASARTANGWHSKEKA 495
RL R H P R P R RR AAGAF R WP R + RT K
Sbjct: 23 RLGRLH-ARPRR--PRANRSRLARRSAAGAFVR----WPSGGPRRLAGRTPGSLTDKGSP 75
Query: 496 ISTLRQLAQPPPLHPLSK 549
+ L A PP HPL++
Sbjct: 76 VLRLALYAAPPADHPLAE 93
>gb|AAN86819.1| 62 kDa protein Tc-1 [Trypanosoma cruzi]
Length = 550
Score = 34.3 bits (77), Expect = 1.3
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Frame = +3
Query: 378 RAAATRCWSVRPCWHVVAWRPVPSCKCSHG*WVALQR---EGHQHPQTTGS--ASTASPA 542
R A W + +HV+ R V +C + W L++ +G+ H + G+ S + A
Sbjct: 262 REAQRWLWLIVSAYHVIETRLVTACDVAAMEWQRLEKKIVDGNHHSHSGGADIGSNCNSA 321
Query: 543 FETTSETPST 572
E T+E PST
Sbjct: 322 SEATAELPST 331
>ref|NP_355646.1| AGR_C_4917p [Agrobacterium tumefaciens]
gi|17936588|ref|NP_533378.1| ABC transporter, membrane
spanning protein [thiamine] [Agrobacterium tumefaciens
str. C58 (U. Washington)] gi|25520740|pir||F97684
thiamin transport system permease protein thiP
[imported] - Agrobacterium tumefaciens (strain C58,
Cereon) gi|25523543|pir||AH2909 hypothetical protein
thiP [imported] - Agrobacterium tumefaciens (strain C58,
Dupont) gi|15157926|gb|AAK88431.1| AGR_C_4917p
[Agrobacterium tumefaciens str. C58 (Cereon)]
gi|17741221|gb|AAL43694.1| ABC transporter, membrane
spanning protein [thiamine] [Agrobacterium tumefaciens
str. C58 (U. Washington)]
Length = 541
Score = 34.3 bits (77), Expect = 1.3
Identities = 30/97 (30%), Positives = 46/97 (46%), Gaps = 13/97 (13%)
Frame = +2
Query: 11 MIRLPTGLVPLVAA------WGLQSALHSGLVWLQADQPTS------ALTAHVVLSM-LT 151
++ +P GL +V A WG Q L+S LV+ AD+P S L AHV ++ L+
Sbjct: 93 LMAVPMGLPVIVGAFGIITIWGRQGVLNSALVFAGADEPFSIYGLSGILIAHVFFNLPLS 152
Query: 152 LVLVLAALATVHLSFAPRAISQSSQTEELQIFIRLPS 262
+ L+LA L + + A S + FI P+
Sbjct: 153 VRLMLAGLERIPGEYWRMAASLGMGPVSVFRFIEWPA 189
