KCC000120A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000120A_C02 KCC000120A_c02
gacaacaatgctttaacttgcgcaagcaacggcgacaaaatgccaccgcccctatctctt
actcttagcgtgttttagctGTTTGTAGTAGTTACATTACATAGGAAGTTTTTGTGAATA
TCCAGCGAGGTAACAGACCCCGGCTTTAGCGAGGCCTTGAAGAAGGGGTGGTTTTCGCAG
CCCAAGTATCATGGGCTGCTTCTCTTCTAAGGAGGCAGTCTATGAGGCAAAGCATGGTCA
AGCAGCGAAGACCGGGCGTGAGCAGGGCTCGGCGAGCGGGCCCAACCCTCCAGCATACCT
CCTGGAAGCGGGGCCGCAGAGCATCCTGCTTGGGGCAAACGCCGGCATCTTGACGCCATC
TAGCGTAACCAACCAGAACAAGTATGCAATCCCAAATTCGGGCCCCCGCAACGCGGCGGG
TCAAGGACCCACTGGCTCTTTCATCGCGCTGGGCGCTGGTGGTGGCTCGATTACAGGAAT
AAACCGCAGAACACCAGTCGGCTTGAAGTCCGGCGCTCACGTCTCGGCCGACCTGAACGC
CATCGTCGACGACCAGGGCACCATCAATGCCCTTGTGAGCCGCCAGCTCTCGGTCATGAG
CCATTATAGCGTGAAAAGTGAGGCTGGAAGCGTTATTCTGCAACCGGAGGTGGCGCATGG
GCCGAACGCGCTCGGGTTCACTTTGCACAAGCTCATCGGTCGCGGGGGCTTCGGCAACGT
GTATCTGGGCGAGTGGGAGGGGCGCAAGGTGGCCGTCAAGGTGGTCACCGGGAACAACAA
CGAGACCGCATCGGACCAGCCGGAGGACAAAGAGTGGGAGGCGCGCAAGGAGAAGATGGC
GCAGATGGAGGCTATCCTGATGGCATCCGTGAACCATCCCAACATTGTGCACACGCTCAA
GGTCATTGCGCACCAGGGCGACGCCATGGACCCAGAGCTAGCGGCCATCGAACGGGAGTT
GTTCACGGAGAAGGAGGATCAACATCCGCCATCCTTCGAGTGGCACATTATCATGGAGTA
CTGCGACCGCGGCTCCTTGTCGCGTGCGCTGGCAGCCATGCGCTTCCACGAGTTCGTGGA
GACGCAGGGGTACGTGCGGTGGGACGCGTGGGCGTGCCTGCAGACGCTCAAGGAGGTGAC
GAAGGCGCTCATGTTCCTGCATGAGAACCGCATCCTGCACGGGGACCTCAAGGCTGCCAA
CGTGCTCCTCAGCAGCAGCGAAACGGACCGCCGCGGGTTCGTCGCCAAGGTGTCGGACTT
CGGTCTGAGTCGCGTGCTGGCGGGCAAC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000120A_C02 KCC000120A_c02
         (1288 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAC84639.1| mixed lineage kinase 4alpha [Homo sapiens]             74  4e-12
emb|CAC17571.1| dJ862P8.3 (Similar to MAP3K10 (mitogen-activated...    74  4e-12
ref|NP_115811.1| mixed lineage kinase 4 [Homo sapiens] gi|177367...    74  4e-12
ref|NP_663583.1| cDNA sequence BC021891; mixed lineage kinase 4 ...    72  2e-11
gb|AAF73281.1|AF155142_1 mixed lineage kinase 3 [Mus musculus]         72  2e-11

>emb|CAC84639.1| mixed lineage kinase 4alpha [Homo sapiens]
          Length = 570

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 86/327 (26%), Positives = 127/327 (38%), Gaps = 38/327 (11%)
 Frame = +2

Query: 407  RNAAGQGPTGSFIALGAGGGSITGINRRTPVGLKSGAHVSADLN---------------- 538
            R AAG   T    A GA GGS +  +  +     +GA + A L                 
Sbjct: 4    RGAAGATDTPVSSAGGAPGGSASSSSTSSGGSASAGAGLWAALYDYEARGEDELSLRRGQ 63

Query: 539  ---------AIVDDQGTINALVSRQLSVM--SHYSVKSEAGSVILQPEVAHGPNALGFT- 682
                     A+  D+G     V R+L +   ++ +    A S    P     P  + F  
Sbjct: 64   LVEVLSQDAAVSGDEGWWAGQVQRRLGIFPANYVAPCRPAASPAPPPSRPSSPVHVAFER 123

Query: 683  --LHKLIGRGGFGNVYLGEWEGRKVAVKVVTGNNNETASDQPEDKEWEARKEKMAQMEAI 856
              L +LIG GGFG VY   W+G++VAVK    +  + A+   E    EAR          
Sbjct: 124  LELKELIGAGGFGQVYRATWQGQEVAVKAARQDPEQDAAAAAESVRREAR---------- 173

Query: 857  LMASVNHPNIVHTLKVIAHQGDAMDPELAAIERELFTEKEDQHPPSFEWHIIMEYCDRGS 1036
            L A + HPNI+    V   Q     P L                      +++E+   G+
Sbjct: 174  LFAMLRHPNIIELRGVCLQQ-----PHLC---------------------LVLEFARGGA 207

Query: 1037 LSRALAAMRFHEFVETQG---YVRWDAWACLQTLKEVTKALMFLHENR---ILHGDLKAA 1198
            L+RALAA          G     R      +    ++ + +++LHE     ILH DLK++
Sbjct: 208  LNRALAAANAAPDPRAPGPRRARRIPPHVLVNWAVQIARGMLYLHEEAFVPILHRDLKSS 267

Query: 1199 NVLL--SSSETDRRGFVAKVSDFGLSR 1273
            N+LL       D      K++DFGL+R
Sbjct: 268  NILLLEEIEHDDICNKTLKITDFGLAR 294

>emb|CAC17571.1| dJ862P8.3 (Similar to MAP3K10 (mitogen-activated protein kinase
            kinase kinase 10)) [Homo sapiens]
          Length = 564

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 86/327 (26%), Positives = 127/327 (38%), Gaps = 38/327 (11%)
 Frame = +2

Query: 407  RNAAGQGPTGSFIALGAGGGSITGINRRTPVGLKSGAHVSADLN---------------- 538
            R AAG   T    A GA GGS +  +  +     +GA + A L                 
Sbjct: 4    RGAAGATDTPVSSAGGAPGGSASSSSTSSGGSASAGAGLWAALYDYEARGEDELSLRRGQ 63

Query: 539  ---------AIVDDQGTINALVSRQLSVM--SHYSVKSEAGSVILQPEVAHGPNALGFT- 682
                     A+  D+G     V R+L +   ++ +    A S    P     P  + F  
Sbjct: 64   LVEVLSQDAAVSGDEGWWAGQVQRRLGIFPANYVAPCRPAASPAPPPSRPSSPVHVAFER 123

Query: 683  --LHKLIGRGGFGNVYLGEWEGRKVAVKVVTGNNNETASDQPEDKEWEARKEKMAQMEAI 856
              L +LIG GGFG VY   W+G++VAVK    +  + A+   E    EAR          
Sbjct: 124  LELKELIGAGGFGQVYRATWQGQEVAVKAARQDPEQDAAAAAESVRREAR---------- 173

Query: 857  LMASVNHPNIVHTLKVIAHQGDAMDPELAAIERELFTEKEDQHPPSFEWHIIMEYCDRGS 1036
            L A + HPNI+    V   Q     P L                      +++E+   G+
Sbjct: 174  LFAMLRHPNIIELRGVCLQQ-----PHLC---------------------LVLEFARGGA 207

Query: 1037 LSRALAAMRFHEFVETQG---YVRWDAWACLQTLKEVTKALMFLHENR---ILHGDLKAA 1198
            L+RALAA          G     R      +    ++ + +++LHE     ILH DLK++
Sbjct: 208  LNRALAAANAAPDPRAPGPRRARRIPPHVLVNWAVQIARGMLYLHEEAFVPILHRDLKSS 267

Query: 1199 NVLL--SSSETDRRGFVAKVSDFGLSR 1273
            N+LL       D      K++DFGL+R
Sbjct: 268  NILLLEKIEHDDICNKTLKITDFGLAR 294

>ref|NP_115811.1| mixed lineage kinase 4 [Homo sapiens] gi|17736731|emb|CAC84640.1|
            mixed lineage kinase 4beta [Homo sapiens]
          Length = 1036

 Score = 74.3 bits (181), Expect = 4e-12
 Identities = 86/327 (26%), Positives = 127/327 (38%), Gaps = 38/327 (11%)
 Frame = +2

Query: 407  RNAAGQGPTGSFIALGAGGGSITGINRRTPVGLKSGAHVSADLN---------------- 538
            R AAG   T    A GA GGS +  +  +     +GA + A L                 
Sbjct: 4    RGAAGATDTPVSSAGGAPGGSASSSSTSSGGSASAGAGLWAALYDYEARGEDELSLRRGQ 63

Query: 539  ---------AIVDDQGTINALVSRQLSVM--SHYSVKSEAGSVILQPEVAHGPNALGFT- 682
                     A+  D+G     V R+L +   ++ +    A S    P     P  + F  
Sbjct: 64   LVEVLSQDAAVSGDEGWWAGQVQRRLGIFPANYVAPCRPAASPAPPPSRPSSPVHVAFER 123

Query: 683  --LHKLIGRGGFGNVYLGEWEGRKVAVKVVTGNNNETASDQPEDKEWEARKEKMAQMEAI 856
              L +LIG GGFG VY   W+G++VAVK    +  + A+   E    EAR          
Sbjct: 124  LELKELIGAGGFGQVYRATWQGQEVAVKAARQDPEQDAAAAAESVRREAR---------- 173

Query: 857  LMASVNHPNIVHTLKVIAHQGDAMDPELAAIERELFTEKEDQHPPSFEWHIIMEYCDRGS 1036
            L A + HPNI+    V   Q     P L                      +++E+   G+
Sbjct: 174  LFAMLRHPNIIELRGVCLQQ-----PHLC---------------------LVLEFARGGA 207

Query: 1037 LSRALAAMRFHEFVETQG---YVRWDAWACLQTLKEVTKALMFLHENR---ILHGDLKAA 1198
            L+RALAA          G     R      +    ++ + +++LHE     ILH DLK++
Sbjct: 208  LNRALAAANAAPDPRAPGPRRARRIPPHVLVNWAVQIARGMLYLHEEAFVPILHRDLKSS 267

Query: 1199 NVLL--SSSETDRRGFVAKVSDFGLSR 1273
            N+LL       D      K++DFGL+R
Sbjct: 268  NILLLEEIEHDDICNKTLKITDFGLAR 294

>ref|NP_663583.1| cDNA sequence BC021891; mixed lineage kinase 4 [Mus musculus]
            gi|18257338|gb|AAH21891.1| CDNA sequence BC021891 [Mus
            musculus]
          Length = 1001

 Score = 72.4 bits (176), Expect = 2e-11
 Identities = 62/211 (29%), Positives = 90/211 (42%), Gaps = 14/211 (6%)
 Frame = +2

Query: 683  LHKLIGRGGFGNVYLGEWEGRKVAVKVVTGNNNETASDQPEDKEWEARKEKMAQMEAILM 862
            L +LIG GGFG VY   W+G++VAVK    +  + A+   E    EAR          L 
Sbjct: 112  LKELIGAGGFGQVYRATWQGQEVAVKAARRDPEQDAAAAAESVRREAR----------LF 161

Query: 863  ASVNHPNIVHTLKVIAHQGDAMDPELAAIERELFTEKEDQHPPSFEWHIIMEYCDRGSLS 1042
            A + HPNI+    V   Q     P L                      +++E+   G+L+
Sbjct: 162  AMLRHPNIIQLRGVCLRQ-----PHLC---------------------LVLEFARGGALN 195

Query: 1043 RALAAM---------RFHEFVETQGYVRWDAWACLQTLKEVTKALMFLHENR---ILHGD 1186
            RALAA          R    +  Q  V W          ++ + +++LHE     ILH D
Sbjct: 196  RALAAAASDPRAPGPRRARRIPPQVLVNWAV--------QIARGMLYLHEEAVVPILHRD 247

Query: 1187 LKAANVLL--SSSETDRRGFVAKVSDFGLSR 1273
            LK++N+LL       D      K++DFGL+R
Sbjct: 248  LKSSNILLLEKIEHDDICNKTLKITDFGLAR 278

>gb|AAF73281.1|AF155142_1 mixed lineage kinase 3 [Mus musculus]
          Length = 850

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 88/323 (27%), Positives = 124/323 (38%), Gaps = 34/323 (10%)
 Frame = +2

Query: 407  RNAAGQGPTGSFIALGAGGGSITG--------------------------INRRTPVGLK 508
            +N   + P GS+   G+GGG  TG                           N +  + L+
Sbjct: 5    KNLFLKSPLGSWNGSGSGGGGGTGGVRPEGSPKATAAYANPVWTALFDYEPNGQDELALR 64

Query: 509  SGAHV---SADLNAIVDDQGTINALVSRQLSVMSHYSVKSEAGSVILQPEVAHGPNALGF 679
             G  V   S D  AI  D+G     V  Q+ +     V    G     P      +    
Sbjct: 65   KGDRVEVLSRDA-AISGDEGWWAGQVGGQVGIFPSNYVSRGGG-----PPPCEVASFQEL 118

Query: 680  TLHKLIGRGGFGNVYLGEWEGRKVAVKVVTGNNNETASDQPEDKEWEARKEKMAQMEAIL 859
             L ++IG GGFG VY G W G  VAVK         A+ Q  D++     E + Q EA L
Sbjct: 119  RLEEVIGIGGFGKVYRGSWRGELVAVK---------AARQDPDEDISVTAESVRQ-EARL 168

Query: 860  MASVNHPNIVHTLKVIAHQGDAMDPELAAIERELFTEKEDQHPPSFEWHIIMEYCDRGSL 1039
             A + HPNI+  LK +  +    +P L                      ++MEY   G L
Sbjct: 169  FAMLAHPNII-ALKAVCLE----EPNLC---------------------LVMEYAAGGPL 202

Query: 1040 SRALAAMRFHEFVETQGYVRWDAWACLQTLKEVTKALMFLHENR---ILHGDLKAANVLL 1210
            SRALA  R    V     V W          ++ + + +LH      ++H DLK+ N+LL
Sbjct: 203  SRALAGRR----VPPHVLVNWAV--------QIARGMHYLHCEALVPVIHRDLKSNNILL 250

Query: 1211 SS--SETDRRGFVAKVSDFGLSR 1273
                   D      K++DFGL+R
Sbjct: 251  LQPIEGDDMEHKTLKITDFGLAR 273



EST assemble image


clone accession position
1 MXL008a06_r BP093411 1 547
2 LCL026b09_r AV627397 338 645
3 CL05g04_r AV393569 442 958
4 HCL051b05_r AV642397 864 1288




Chlamydomonas reinhardtii
Kazusa DNA Research Institute