KCC000108A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000108A_C01 KCC000108A_c01
AGGAGAGACAATGGGTCGGCCTTAGCGTGGCCTCCTCACCGTAAAGACTAGGCCGCCACA
ACCATGGCCACTATTCAGAGTGGCGTCGCCCGCGCGGCGAGCCGCCCGCAGCCCAAGGTC
GCCGCTGGCAGCATCAGCAGCCTGCGTGTGAAGCCCTTTACCCGCGCCACCCGCAGCGTT
CTGGGCGCCGCTCCTCGCCAGAATGTGGTCCCCCGCGCTGCTGAGCCTGAGGCCGTGGCC
ACTGAGGCTGACGACTTCACTTTCAGCCTGAGCGATGCCAAGAAGGGCAACGAGTACACT
GCTGGCGACGTGGAGGCTGCTCTGCGCTTCTACTCGGGCGAGGCTTCGGCCGTGGGCGCG
ACCAATGACGAGTTTGTGGAGAACGTCTTCGGCATTGAGGACGCTGACTTCTTCGGCGAC
CTGGACAACAACGAGGCCTACGATGACGAGTTCATTGCTGCTGGTATTCCCGAGGCTGCC
CCCAAGCAGCGTCAGGGGGGCAAGCGCGGCGGCGAGGGCGAGGGTGCTGAGGACAGCGAC
GACATTGCCGCTGGCAAGGAGGCTGAGGCGATGAAGCAG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000108A_C01 KCC000108A_c01
         (579 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAM18796.1| ribosomal protein S5 precursor [Chlamydomonas rei...   334  5e-91
gb|AAH58068.1| Unknown (protein for MGC:63802) [Danio rerio]           51  1e-05
emb|CAB46679.1| proteophosphoglycan [Leishmania major]                 51  1e-05
gb|AAP74957.1| keratinocytes proline-rich protein [Rattus norveg...    51  1e-05
pir||T46707 proteophosphoglycan, membrane-associated [imported] ...    50  2e-05

>gb|AAM18796.1| ribosomal protein S5 precursor [Chlamydomonas reinhardtii]
          Length = 673

 Score =  334 bits (857), Expect = 5e-91
 Identities = 171/172 (99%), Positives = 171/172 (99%)
 Frame = +1

Query: 64  MATIQSGVARAASRPQPKVAAGSISSLRVKPFTRATRSVLGAAPRQNVVPRAAEPEAVAT 243
           MATIQSGVARAASRPQPKVAAGSISSLRVKPFTRATRSVLGAAPRQNVVPRAAEPEAVAT
Sbjct: 1   MATIQSGVARAASRPQPKVAAGSISSLRVKPFTRATRSVLGAAPRQNVVPRAAEPEAVAT 60

Query: 244 EADDFTFSLSDAKKGNEYTAGDVEAALRFYSGEASAVGATNDEFVENVFGIEDADFFGDL 423
           EADDFTFSLSDAKKGNEYTAGDVEAALRFYSGEASAVGATNDEFVENVFGIEDADFFGDL
Sbjct: 61  EADDFTFSLSDAKKGNEYTAGDVEAALRFYSGEASAVGATNDEFVENVFGIEDADFFGDL 120

Query: 424 DNNEAYDDEFIAAGIPEAAPKQRQGGKRGGEGEGAEDSDDIAAGKEAEAMKQ 579
           DNNEAYDDEFIAAGIPEAAPKQRQGGKRGGEGEGAEDSDDIAA KEAEAMKQ
Sbjct: 121 DNNEAYDDEFIAAGIPEAAPKQRQGGKRGGEGEGAEDSDDIAAAKEAEAMKQ 172

>gb|AAH58068.1| Unknown (protein for MGC:63802) [Danio rerio]
          Length = 896

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 45/140 (32%), Positives = 58/140 (41%), Gaps = 11/140 (7%)
 Frame = -3

Query: 571 SPQPPCQR-------QCRRCPQHPRPRRRACPPDAAWGQPREYQQQ*TRHRRPRCCPG-- 419
           SP PP +R       + RR P  P  RR   PP   +  P +      R+  P   P   
Sbjct: 501 SPSPPGRRHRSQSPVRRRRSPSPPPRRRSPSPPPRRFTPPIQ-----RRYSPPSPSPAQK 555

Query: 418 RRRSQRPQCRRRSPQTRHWSRPRPKPRPSR--SAEQPPRRQQCTRCPSWHRSG*K*SRQP 245
           RR S  P  RRRSP      R  P P P R  S   PP+R++     S  R+    S++ 
Sbjct: 556 RRSSGSPPKRRRSPSPMPKRRIPPSPPPKRRMSPSPPPKRRKSPSPMSKRRTSPSVSKRR 615

Query: 244 QWPRPQAQQRGGPHSGEERR 185
             P P A+ R  P    +RR
Sbjct: 616 TSPSPVAKHRRSPSPMSKRR 635

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 51/170 (30%), Positives = 70/170 (41%), Gaps = 5/170 (2%)
 Frame = -3

Query: 571  SPQPPCQRQCRRCPQHPRPRRRACPPDAAWGQPREYQQQ*TRHRRPRCCPGRRRSQRPQC 392
            SP  P   Q RR    P  RRR+  P      P     +  R   P   P RR+S  P  
Sbjct: 546  SPPSPSPAQKRRSSGSPPKRRRSPSPMPKRRIPPSPPPK--RRMSPSPPPKRRKSPSPMS 603

Query: 391  RRR-SPQ-TRHWSRPRPKPRPSRSAEQPPRRQQCTRCPSWHRSG*K*SRQPQ-WPRPQAQ 221
            +RR SP  ++  + P P  +  RS     +R+ C    S  R+    + Q +  P P  +
Sbjct: 604  KRRTSPSVSKRRTSPSPVAKHRRSPSPMSKRRTCASPVSKRRNSPSPAPQRRSSPSPMPK 663

Query: 220  QRGGPHSGEERRPERCGWRG*RASHAGC*CCQRR--PWAAGGSPRGRRHS 77
             RG P    +R   R   R  R +  G    +RR  P +A   PR RR+S
Sbjct: 664  HRGSPSPVTKRHTSRSPKRS-RGTSPG----KRRTPPSSASPPPRHRRNS 708

 Score = 41.2 bits (95), Expect = 0.010
 Identities = 39/127 (30%), Positives = 51/127 (39%), Gaps = 30/127 (23%)
 Frame = -3

Query: 571  SPQPPCQRQCRRCPQHPR---PRRRACPPDAAWGQPREYQQ----------Q*TRHRRPR 431
            SP P  +R   R P+  R   P +R  PP +A   PR  +           + TR   P 
Sbjct: 667  SPSPVTKRHTSRSPKRSRGTSPGKRRTPPSSASPPPRHRRNSPNPPAAQRGRDTRSSPPA 726

Query: 430  CC-------PGR--RRSQRPQCRRRSPQTRHWSRP------RPKPRPSRSAEQ--PPRRQ 302
                     PGR       PQ +RR     H +RP       P+PR S+   Q  PP R+
Sbjct: 727  HTTRVSSSPPGRYGASGSSPQRQRRQTSPSHSTRPIRRVSRTPEPRKSQRGSQSPPPERR 786

Query: 301  QCTRCPS 281
            Q +R PS
Sbjct: 787  QVSRSPS 793

 Score = 38.1 bits (87), Expect = 0.089
 Identities = 38/98 (38%), Positives = 47/98 (47%), Gaps = 2/98 (2%)
 Frame = -3

Query: 448 RHRRPRCCPGRRRSQRPQCRRRSPQTRHWSRPRPKPRPSRSAEQPPRRQQCTRCPSWHRS 269
           RHR     P  RR  RP+ R RS   R  + PR +  P R +  PPRRQ     PS HR 
Sbjct: 277 RHRSRSRSPRSRR--RPRSRSRSFSPRRRTSPRRRISPRRRS--PPRRQP----PSRHRR 328

Query: 268 G*K*SRQP-QWPRPQAQQRGGPHSGEERRP-ERCGWRG 161
               SR P +  RP+++   G  S   R P +R G RG
Sbjct: 329 ----SRSPVRRRRPRSRSSSG--SSSSRSPHKRAGKRG 360

 Score = 36.2 bits (82), Expect = 0.34
 Identities = 40/145 (27%), Positives = 50/145 (33%), Gaps = 22/145 (15%)
 Frame = -3

Query: 553 QRQCRRCPQHPRPRRRACPPDAAWGQPREYQQQ*TRHRRPRCCPGRR-RSQRPQCRRRSP 377
           +R+    P  PR R R   P               R RR    PGRR RSQ P  RRRSP
Sbjct: 477 RRRRSHSPASPRRRHRDASP---------------RKRRSPSPPGRRHRSQSPVRRRRSP 521

Query: 376 Q-------------------TRHWSRPRPKPRPSR--SAEQPPRRQQCTRCPSWHRSG*K 260
                                R +S P P P   R  S   P RR+  +  P        
Sbjct: 522 SPPPRRRSPSPPPRRFTPPIQRRYSPPSPSPAQKRRSSGSPPKRRRSPSPMPKRRIPPSP 581

Query: 259 *SRQPQWPRPQAQQRGGPHSGEERR 185
             ++   P P  ++R  P    +RR
Sbjct: 582 PPKRRMSPSPPPKRRKSPSPMSKRR 606

>emb|CAB46679.1| proteophosphoglycan [Leishmania major]
          Length = 873

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
 Frame = -2

Query: 566  SASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMPK 387
            SAS  +A SS SSAPS S    P      ++S  P+A +SS+ +S  S +P  S+SS P 
Sbjct: 702  SASSSSAPSSSSSAPSASSSSAPS----SSSSSAPSASSSSAPSSSSSSAPSASSSSAPS 757

Query: 386  TFS---TNSSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGSAA 216
            + S   + SS  AP++ +S      +++ S +  S P  +S      SS+S  +AS S+A
Sbjct: 758  SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSA 817

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 42/120 (35%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
 Frame = -2

Query: 566 SASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMPK 387
           SAS  +A SS SSAPS S    P      ++S  P+A +SS+ +S  S +P  S+SS P 
Sbjct: 640 SASSSSAPSSSSSAPSASSSSAPS----SSSSSAPSASSSSAPSSSSSSAPSASSSSAPS 695

Query: 386 TFS---TNSSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGSAA 216
           + S   + SS  AP++ +S      +++ S +  S P  +S      SS+S  +AS S+A
Sbjct: 696 SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSA 755

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 37/117 (31%), Positives = 64/117 (54%)
 Frame = -2

Query: 569 ASASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMP 390
           +S+S P+A SS +S+ S S P         ++S  P+A +SS+ +S  S +P  S+SS P
Sbjct: 619 SSSSAPSASSSSASSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAP 678

Query: 389 KTFSTNSSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGSA 219
               ++SS  AP+A +S      +++ S +  S P  +S      SS++ +++S SA
Sbjct: 679 ----SSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSA 731

 Score = 49.7 bits (117), Expect = 3e-05
 Identities = 40/116 (34%), Positives = 63/116 (53%)
 Frame = -2

Query: 566  SASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMPK 387
            SAS  +A SS SSAPS S    P      ++S  P+A +SS+ +S  S +P  S+SS P 
Sbjct: 687  SASSSSAPSSSSSAPSASSSSAP-----SSSSSAPSASSSSAPSSSSSSAPSASSSSAP- 740

Query: 386  TFSTNSSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGSA 219
               ++SS  AP+A +S      +++ S +  S P  +S      SS++ +++S SA
Sbjct: 741  ---SSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSA 793

 Score = 48.5 bits (114), Expect = 7e-05
 Identities = 42/121 (34%), Positives = 64/121 (52%)
 Frame = -2

Query: 566  SASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMPK 387
            SAS  +A SS SSAPS S    P      ++S  P+A +SS+ +S  S +P  S+SS P 
Sbjct: 749  SASSSSAPSSSSSAPSASSSSAP-----SSSSSAPSASSSSAPSSSSSSAPSASSSSAP- 802

Query: 386  TFSTNSSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGSAARGT 207
               ++SS  AP+A +S       ++ S +  S P  +S      SS+S  +AS S+A  +
Sbjct: 803  ---SSSSSSAPSASSS-------SAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSASSS 852

Query: 206  T 204
            +
Sbjct: 853  S 853

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 41/116 (35%), Positives = 60/116 (51%)
 Frame = -2

Query: 566  SASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMPK 387
            SAS  +A SS SSAPS S    P      ++S  P+A +SS+ +S  S +P  S+SS P 
Sbjct: 764  SASSSSAPSSSSSAPSASSSSAPS----SSSSSAPSASSSSAPSSSSSSAPSASSSSAP- 818

Query: 386  TFSTNSSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGSA 219
               ++SS  AP+A +S      ++S   A  S    +S      SS+S  ++S SA
Sbjct: 819  ---SSSSSSAPSASSSSAPSSSSSSAPSASSSSASSSSSSAPSASSSSAPSSSSSA 871

 Score = 44.3 bits (103), Expect = 0.001
 Identities = 42/122 (34%), Positives = 62/122 (50%), Gaps = 4/122 (3%)
 Frame = -2

Query: 569  ASASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMP 390
            +++S  A  SS SSAPS S    P      ++S  P+A +SSS  S  S +P  S+SS P
Sbjct: 717  SASSSSAPSSSSSSAPSASSSSAPS----SSSSSAPSA-SSSSAPSSSSSAPSASSSSAP 771

Query: 389  KTFSTNSSLVAPTAEASPE*KRRAASTSPA----VYSLPFLASLRLKVKSSASVATASGS 222
             + S+  S  + +A +S      +AS+S A      S P  +S      SS+S  +AS S
Sbjct: 772  SSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSS 831

Query: 221  AA 216
            +A
Sbjct: 832  SA 833

 Score = 42.7 bits (99), Expect = 0.004
 Identities = 39/121 (32%), Positives = 62/121 (51%), Gaps = 4/121 (3%)
 Frame = -2

Query: 569  ASASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMP 390
            +++S  A  SS SSAPS S    P      ++S  P+A +SSS  S  S +P  S+SS P
Sbjct: 671  SASSSSAPSSSSSSAPSASSSSAP-----SSSSSAPSA-SSSSAPSSSSSAPSASSSSAP 724

Query: 389  KTFSTN----SSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGS 222
             + S++    SS  AP++ +S      ++S   +  S P  +S      SS++ + +S S
Sbjct: 725  SSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSS 784

Query: 221  A 219
            A
Sbjct: 785  A 785

 Score = 42.4 bits (98), Expect = 0.005
 Identities = 40/117 (34%), Positives = 60/117 (51%)
 Frame = -2

Query: 569 ASASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMP 390
           +++S  A  SS SSAPS S    P      ++S  P+A +SSS  S  S +P  S+SS P
Sbjct: 655 SASSSSAPSSSSSSAPSASSSSAPS----SSSSSAPSA-SSSSAPSSSSSAPSASSSSAP 709

Query: 389 KTFSTNSSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGSA 219
            + S+  S  + +A +S      +AS+S    S P  +S      SS+S  ++S SA
Sbjct: 710 SSSSSAPSASSSSAPSSSSSSAPSASSS----SAPSSSSSSAPSASSSSAPSSSSSA 762

 Score = 41.2 bits (95), Expect = 0.010
 Identities = 29/90 (32%), Positives = 50/90 (55%)
 Frame = -2

Query: 569  ASASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMP 390
            +++S  A  SS SSAPS S    P      ++S  P+A +SS+ +S  S +P  S+SS P
Sbjct: 779  SASSSSAPSSSSSSAPSASSSSAPS----SSSSSAPSASSSSAPSSSSSSAPSASSSSAP 834

Query: 389  KTFSTNSSLVAPTAEASPE*KRRAASTSPA 300
             + S+++   + ++ +S      +AS+S A
Sbjct: 835  SSSSSSAPSASSSSASSSSSSAPSASSSSA 864

 Score = 33.1 bits (74), Expect = 2.9
 Identities = 26/68 (38%), Positives = 38/68 (55%)
 Frame = -2

Query: 569 ASASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMP 390
           +++S  A  SS SSAPS S    P      ++S  P+A +SSS +S  S +P  S+SS P
Sbjct: 811 SASSSSAPSSSSSSAPSASSSSAPS----SSSSSAPSA-SSSSASSSSSSAPSASSSSAP 865

Query: 389 KTFSTNSS 366
            + S+  S
Sbjct: 866 SSSSSAPS 873

 Score = 32.7 bits (73), Expect = 3.7
 Identities = 26/83 (31%), Positives = 41/83 (49%)
 Frame = -2

Query: 464 PAAMNSSS*ASLLSRSPKKSASSMPKTFSTNSSLVAPTAEASPE*KRRAASTSPAVYSLP 285
           P   +SSS  S  S S   S+SS P   S++    AP++ +S      +++ S +  S P
Sbjct: 615 PETESSSSAPSASSSSASSSSSSAPSASSSS----APSSSSSAPSASSSSAPSSSSSSAP 670

Query: 284 FLASLRLKVKSSASVATASGSAA 216
             +S      SS+S  +AS S+A
Sbjct: 671 SASSSSAPSSSSSSAPSASSSSA 693

>gb|AAP74957.1| keratinocytes proline-rich protein [Rattus norvegicus]
          Length = 699

 Score = 50.8 bits (120), Expect = 1e-05
 Identities = 48/155 (30%), Positives = 61/155 (38%), Gaps = 21/155 (13%)
 Frame = -3

Query: 574 SSPQPPCQRQCRRCP-QHP--RPRRRACPPDAAWGQP-REYQQQ*TRHRRPRCCPGRRRS 407
           SSP  P Q   +RCP Q P  R R R+CP   +WG    + +     H  PR C  +R  
Sbjct: 372 SSPCCPRQVPPQRCPVQIPPIRGRSRSCPRQPSWGVSCPDLRPCAEPHAFPRPCRPQRLD 431

Query: 406 QRPQCRRR-----------------SPQTRHWSRPRPKPRPSRSAEQPPRRQQCTRCPSW 278
           + P+   R                 SP+ R   RPRP+P P  S E  PR +    CPS 
Sbjct: 432 RSPESSWRRCPVPAPRPYPRPEPCPSPEPRPCPRPRPRPEPCPSPEPRPRPRP-DPCPSP 490

Query: 277 HRSG*K*SRQPQWPRPQAQQRGGPHSGEERRPERC 173
                        P P+ + R  P    E RP  C
Sbjct: 491 ELRPRPRPEPCPSPEPRPRPRPDPCPSPEPRPRPC 525

 Score = 40.4 bits (93), Expect = 0.018
 Identities = 44/156 (28%), Positives = 55/156 (35%), Gaps = 24/156 (15%)
 Frame = -3

Query: 568 PQPPCQRQCRRCPQHPRPRRRACPPDAAWGQPREYQQQ*TRHR---RPRCCPGRRRSQRP 398
           P+P    + R CP+ PRPR   CP      +PR         R   RP  CP      RP
Sbjct: 452 PEPCPSPEPRPCPR-PRPRPEPCPSPEPRPRPRPDPCPSPELRPRPRPEPCPSPEPRPRP 510

Query: 397 QCRRRSPQTRHWSRPRPKPRPSRSAEQ---PPRR---------QQCT---------RCPS 281
              R  P      RPRP P P  S E    PP R         + C+          CP+
Sbjct: 511 ---RPDPCPSPEPRPRPCPEPCPSPEPRPCPPLRRFSEPCLYPEPCSVSKPVPCPVPCPA 567

Query: 280 WHRSG*K*SRQPQWPRPQAQQRGGPHSGEERRPERC 173
            H          + P+P  + +  PH     RP  C
Sbjct: 568 PHPRPVHCETPGRRPQPSPRSQPCPHPEPMPRPVPC 603

>pir||T46707 proteophosphoglycan, membrane-associated [imported] - Leishmania
           major (fragment) gi|5420389|emb|CAB46680.1|
           proteophosphoglycan [Leishmania major]
          Length = 383

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 4/122 (3%)
 Frame = -2

Query: 569 ASASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMP 390
           +S+S P+A SS + + S S P         ++S  P+A +SS+ +S  S +P  S+SS P
Sbjct: 98  SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAP 157

Query: 389 KTFSTN----SSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGS 222
            + S++    SS  AP++ +S      ++S   +  S P  +S      SS+S  +AS S
Sbjct: 158 SSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSS 217

Query: 221 AA 216
           +A
Sbjct: 218 SA 219

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 41/116 (35%), Positives = 62/116 (53%)
 Frame = -2

Query: 566 SASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMPK 387
           SAS  +A SS SSAPS S    P      ++S  P+A +SS+ +S  S +P  S+SS P 
Sbjct: 119 SASSSSAPSSSSSAPSASSSSAPS----SSSSSAPSASSSSAPSSSSSSAPSASSSSAP- 173

Query: 386 TFSTNSSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGSA 219
              ++SS  AP+A +S      +++ S +  S P  +S      SS+S  ++S SA
Sbjct: 174 ---SSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSA 226

 Score = 49.3 bits (116), Expect = 4e-05
 Identities = 43/118 (36%), Positives = 63/118 (52%), Gaps = 1/118 (0%)
 Frame = -2

Query: 566 SASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMPK 387
           SAS  +A SS SSAPS S    P      ++S  P+A +SS+ +S  S +P  S+SS P 
Sbjct: 27  SASSSSAPSSSSSAPSASSSSAPS----SSSSSAPSASSSSAPSSSSSSAPSASSSSAPS 82

Query: 386 TFSTNSSLVAPTAEASPE*KRRAASTS-PAVYSLPFLASLRLKVKSSASVATASGSAA 216
           + S+  S  + +A +S      A+S+S P+  S    AS      SS+S  +AS S+A
Sbjct: 83  SSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSA 140

 Score = 48.9 bits (115), Expect = 5e-05
 Identities = 43/121 (35%), Positives = 66/121 (54%), Gaps = 4/121 (3%)
 Frame = -2

Query: 566 SASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMPK 387
           SAS  +A SS SSAPS S    P      ++S  P+A +SS+ +S  S +P  S+SS P 
Sbjct: 12  SASSSSAPSSSSSAPSASSSSAP-----SSSSSAPSASSSSAPSSSSSSAPSASSSSAPS 66

Query: 386 TFSTN----SSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGSA 219
           + S++    SS  AP++ +S      ++S++P+  S    AS      SS+S  +AS S+
Sbjct: 67  SSSSSAPSASSSSAPSSSSSA--PSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSS 124

Query: 218 A 216
           A
Sbjct: 125 A 125

 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 44/121 (36%), Positives = 62/121 (50%), Gaps = 4/121 (3%)
 Frame = -2

Query: 566 SASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMPK 387
           SAS  +A SS SSAPS S    P      ++S  P+A +SSS  S  S +P  S+SS P 
Sbjct: 74  SASSSSAPSSSSSAPSASSSSAP-----SSSSSAPSA-SSSSAPSSSSSAPSASSSSAPS 127

Query: 386 TFSTNSSLVAPTAEASPE*KRRAASTSPA----VYSLPFLASLRLKVKSSASVATASGSA 219
           + S+  S  + +A +S      +AS+S A      S P  +S      SS+S  +AS S+
Sbjct: 128 SSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSS 187

Query: 218 A 216
           A
Sbjct: 188 A 188

 Score = 45.1 bits (105), Expect = 7e-04
 Identities = 41/121 (33%), Positives = 63/121 (51%), Gaps = 3/121 (2%)
 Frame = -2

Query: 569 ASASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMP 390
           +++S  A  SS SSAPS S    P      ++S  P+A +SSS  S  S +P  S+SS P
Sbjct: 58  SASSSSAPSSSSSSAPSASSSSAP-----SSSSSAPSA-SSSSAPSSSSSAPSASSSSAP 111

Query: 389 KTFS---TNSSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGSA 219
            + S   + SS  AP++ +S      +++ S +  S P  +S      SS+S  +AS S+
Sbjct: 112 SSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSS 171

Query: 218 A 216
           A
Sbjct: 172 A 172

 Score = 43.9 bits (102), Expect = 0.002
 Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 5/123 (4%)
 Frame = -2

Query: 569 ASASLPAAMSSLSSAPSPSPPRLPP*RCLGA--ASGIPAAMNSSS*ASLLSRSPKKSASS 396
           +++S  A  SS SSAPS S    P      A  AS   A  +SSS  S  S S   S+SS
Sbjct: 42  SASSSSAPSSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSS 101

Query: 395 MPKTFST---NSSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASG 225
            P   S+   +SS  AP+A +S      +++ S +  S P  +S      SS+S  ++S 
Sbjct: 102 APSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSSAPSASSSSAPSSSS 161

Query: 224 SAA 216
           S+A
Sbjct: 162 SSA 164

 Score = 41.6 bits (96), Expect = 0.008
 Identities = 38/115 (33%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
 Frame = -2

Query: 551 AAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMPKTFSTN 372
           +A SS SSAPS S    P      ++S  P+A +SSS  S  S +P  S+SS P + S++
Sbjct: 2   SAPSSSSSAPSASSSSAP-----SSSSSAPSA-SSSSAPSSSSSAPSASSSSAPSSSSSS 55

Query: 371 ----SSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGSA 219
               SS  AP++ +S      ++S   +  S P  +S      SS++ + +S SA
Sbjct: 56  APSASSSSAPSSSSSSAPSASSSSAPSSSSSAPSASSSSAPSSSSSAPSASSSSA 110

 Score = 38.9 bits (89), Expect = 0.052
 Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 6/155 (3%)
 Frame = -2

Query: 566 SASLPAA-MSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMP 390
           SAS  +A  SS SSAPS S    P      ++S  P+A +SS+ +S  S +P  S+SS P
Sbjct: 166 SASSSSAPSSSSSSAPSASSSSAP-----SSSSSAPSASSSSAPSSSSSSAPSASSSSAP 220

Query: 389 KTFST--NSSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSASVATASGSAA 216
            + S+  +SS    T + +P+    ++S+S +     F   L L   ++        S  
Sbjct: 221 SSSSSAPSSSSTTTTMDPTPDPVLPSSSSSSSHADTYFYDRLYLLCPNAEETGVDMISMH 280

Query: 215 RG---TTFWRGAAPRTLRVARVKGFTRRLLMLPAA 120
           +     T W G+   T     +K +++ ++    A
Sbjct: 281 KNDICCTEWEGSDHSTSCGDNIKNYSKAIVTCSGA 315

 Score = 36.6 bits (83), Expect = 0.26
 Identities = 35/109 (32%), Positives = 55/109 (50%)
 Frame = -2

Query: 569 ASASLPAAMSSLSSAPSPSPPRLPP*RCLGAASGIPAAMNSSS*ASLLSRSPKKSASSMP 390
           +++S  A  SS SSAPS S    P      ++S  P+A +SSS  S  S +P  S+SS P
Sbjct: 150 SASSSSAPSSSSSSAPSASSSSAPS----SSSSSAPSA-SSSSAPSSSSSAPSASSSSAP 204

Query: 389 KTFSTNSSLVAPTAEASPE*KRRAASTSPAVYSLPFLASLRLKVKSSAS 243
              S++SS  + ++ ++P     A S+S    ++       L   SS+S
Sbjct: 205 S--SSSSSAPSASSSSAPSSSSSAPSSSSTTTTMDPTPDPVLPSSSSSS 251



EST assemble image


clone accession position
1 HCL002g08_r AV639670 1 456
2 HCL005a03_r AV639784 1 458
3 HCL059d04_r AV642857 1 495
4 CL19f01_r AV394167 1 496
5 CL69a03_r AV396809 1 581
6 MXL023a05_r BP094436 9 492
7 HCL028h04_r AV641158 15 503
8 CL05c07_r AV393553 15 510
9 CL73a03_r AV396983 15 479
10 HCL019c03_r AV640614 15 220
11 HCL090c11_r AV644545 15 175
12 MXL031c11_r BP094864 16 339
13 HCL064c09_r AV643131 16 495
14 HCL077a07_r AV643842 32 420
15 LCL027g06_r AV627506 64 337




Chlamydomonas reinhardtii
Kazusa DNA Research Institute