Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000102A_C01 KCC000102A_c01
(1054 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_197636.1| 60S ribosomal protein L10A (RPL10aC) [Arabidops... 142 2e-62
ref|NP_563813.2| 60S ribosomal protein L10A (RPL10aA) [Arabidops... 142 5e-61
ref|NP_565654.1| 60S ribosomal protein L10A (RPL10aB) [Arabidops... 141 3e-60
pir||A84674 60S ribosomal protein L10A [imported] - Arabidopsis ... 141 1e-59
dbj|BAB91757.1| putative 60S ribosomal protein [Oryza sativa (ja... 129 1e-58
>ref|NP_197636.1| 60S ribosomal protein L10A (RPL10aC) [Arabidopsis thaliana]
gi|27923990|sp|P59231|R10C_ARATH 60S ribosomal protein
L10a-3 gi|9757825|dbj|BAB08343.1| 60S ribosomal protein
L10A [Arabidopsis thaliana] gi|14335148|gb|AAK59854.1|
AT5g22440/MWD9_24 [Arabidopsis thaliana]
gi|18655359|gb|AAL76135.1| AT5g22440/MWD9_24
[Arabidopsis thaliana]
Length = 217
Score = 142 bits (357), Expect(2) = 2e-62
Identities = 69/102 (67%), Positives = 84/102 (81%), Gaps = 2/102 (1%)
Frame = +1
Query: 352 VIKQIPRLLGPGLNKAGKFPAPIN--KNLEEMVLDTKCSIKFQLKKVLCMGVAVANVGMT 525
VIKQIPRLLGPGLNKAGKFP ++ ++LE V +TK ++KFQLKKVLCMGVAV N+ M
Sbjct: 116 VIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSME 175
Query: 526 EGEIRTNIMYAINFLVSLLKKNWQNVRCLYIKSTMGKPIRIY 651
E +I N+ ++NFLVSLLKKNWQNVRCLY+KSTMG P R++
Sbjct: 176 EKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPNRVF 217
Score = 120 bits (302), Expect(2) = 2e-62
Identities = 66/116 (56%), Positives = 83/116 (70%), Gaps = 1/116 (0%)
Frame = +3
Query: 6 MSKISNDVLRESVSALVEGAK-TKPRKFQETVELQIGLKNYDPQKDKRFSGSVRLALRAS 182
MSK+ ++ +RE++S+++ K TKPR F ET+ELQIGLKNYDPQKDKRFSGSV+L
Sbjct: 1 MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60
Query: 183 PPACACACWVM*STVSSAGAIGVDAKGVEDLKKLNKNKKLVKKLAQAYHAFLASDS 350
P C V A IG+++ VE LKKLNKNKKLVKKLA+ +HAFLAS+S
Sbjct: 61 PKMKICMLGDA-QHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASES 115
>ref|NP_563813.2| 60S ribosomal protein L10A (RPL10aA) [Arabidopsis thaliana]
gi|28173519|sp|Q8VZB9|R10A_ARATH 60S ribosomal protein
L10a-1 gi|17473553|gb|AAL38253.1| putative ribosomal
protein L10 [Arabidopsis thaliana]
gi|21386915|gb|AAM47861.1| putative ribosomal protein
L10 [Arabidopsis thaliana]
Length = 216
Score = 142 bits (358), Expect(2) = 5e-61
Identities = 70/102 (68%), Positives = 84/102 (81%), Gaps = 2/102 (1%)
Frame = +1
Query: 352 VIKQIPRLLGPGLNKAGKFPAPIN--KNLEEMVLDTKCSIKFQLKKVLCMGVAVANVGMT 525
VIKQIPRLLGPGLNKAGKFP ++ ++LE V +TK ++KFQLKKVLCMGVAV N+ M
Sbjct: 115 VIKQIPRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSME 174
Query: 526 EGEIRTNIMYAINFLVSLLKKNWQNVRCLYIKSTMGKPIRIY 651
E +I N+ ++NFLVSLLKKNWQNVRCLY+KSTMG P RI+
Sbjct: 175 EKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216
Score = 115 bits (289), Expect(2) = 5e-61
Identities = 62/115 (53%), Positives = 79/115 (67%)
Frame = +3
Query: 6 MSKISNDVLRESVSALVEGAKTKPRKFQETVELQIGLKNYDPQKDKRFSGSVRLALRASP 185
MSK+ ++ +RE+++ + ++ K R F ET+ELQIGLKNYDPQKDKRFSGSV+L P
Sbjct: 1 MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 186 PACACACWVM*STVSSAGAIGVDAKGVEDLKKLNKNKKLVKKLAQAYHAFLASDS 350
C V A +G++ VE LKKLNKNKKLVKKLA+ YHAFLAS+S
Sbjct: 61 KMKICMLGDA-QHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASES 114
>ref|NP_565654.1| 60S ribosomal protein L10A (RPL10aB) [Arabidopsis thaliana]
gi|30683566|ref|NP_850104.1| 60S ribosomal protein L10A
(RPL10aB) [Arabidopsis thaliana]
gi|27923989|sp|P59230|R10B_ARATH 60S ribosomal protein
L10a-2 gi|13430468|gb|AAK25856.1|AF360146_1 putative 60S
ribosomal protein L10A [Arabidopsis thaliana]
gi|15810665|gb|AAL07257.1| putative 60S ribosomal
protein L10A [Arabidopsis thaliana]
gi|19698833|gb|AAL91152.1| 60S ribosomal protein L10A
[Arabidopsis thaliana] gi|20197452|gb|AAC73045.2| 60S
ribosomal protein L10A [Arabidopsis thaliana]
gi|20197665|gb|AAM15190.1| 60S ribosomal protein L10A
[Arabidopsis thaliana] gi|30023674|gb|AAP13370.1|
At2g27530 [Arabidopsis thaliana]
Length = 216
Score = 141 bits (355), Expect(2) = 3e-60
Identities = 69/102 (67%), Positives = 84/102 (81%), Gaps = 2/102 (1%)
Frame = +1
Query: 352 VIKQIPRLLGPGLNKAGKFPAPIN--KNLEEMVLDTKCSIKFQLKKVLCMGVAVANVGMT 525
VIKQIPRLLGPGLNKAGKFP ++ ++LE V +TK ++KFQLKKVLCMGVAV N+ M
Sbjct: 115 VIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSME 174
Query: 526 EGEIRTNIMYAINFLVSLLKKNWQNVRCLYIKSTMGKPIRIY 651
E ++ N+ ++NFLVSLLKKNWQNVRCLY+KSTMG P RI+
Sbjct: 175 EKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 216
Score = 114 bits (285), Expect(2) = 3e-60
Identities = 63/115 (54%), Positives = 79/115 (67%)
Frame = +3
Query: 6 MSKISNDVLRESVSALVEGAKTKPRKFQETVELQIGLKNYDPQKDKRFSGSVRLALRASP 185
MSK+ ++ +RE+++ + ++ K R F ETVELQIGLKNYDPQKDKRFSGSV+L P
Sbjct: 1 MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 186 PACACACWVM*STVSSAGAIGVDAKGVEDLKKLNKNKKLVKKLAQAYHAFLASDS 350
C V A +G+ VE LKKLNKNKKLVKKLA++YHAFLAS+S
Sbjct: 61 KMKICMLGDA-QHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASES 114
>pir||A84674 60S ribosomal protein L10A [imported] - Arabidopsis thaliana
Length = 222
Score = 141 bits (355), Expect(2) = 1e-59
Identities = 69/102 (67%), Positives = 84/102 (81%), Gaps = 2/102 (1%)
Frame = +1
Query: 352 VIKQIPRLLGPGLNKAGKFPAPIN--KNLEEMVLDTKCSIKFQLKKVLCMGVAVANVGMT 525
VIKQIPRLLGPGLNKAGKFP ++ ++LE V +TK ++KFQLKKVLCMGVAV N+ M
Sbjct: 121 VIKQIPRLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSME 180
Query: 526 EGEIRTNIMYAINFLVSLLKKNWQNVRCLYIKSTMGKPIRIY 651
E ++ N+ ++NFLVSLLKKNWQNVRCLY+KSTMG P RI+
Sbjct: 181 EKQLFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGPPQRIF 222
Score = 112 bits (280), Expect(2) = 1e-59
Identities = 62/114 (54%), Positives = 78/114 (68%)
Frame = +3
Query: 9 SKISNDVLRESVSALVEGAKTKPRKFQETVELQIGLKNYDPQKDKRFSGSVRLALRASPP 188
SK+ ++ +RE+++ + ++ K R F ETVELQIGLKNYDPQKDKRFSGSV+L P
Sbjct: 8 SKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRPK 67
Query: 189 ACACACWVM*STVSSAGAIGVDAKGVEDLKKLNKNKKLVKKLAQAYHAFLASDS 350
C V A +G+ VE LKKLNKNKKLVKKLA++YHAFLAS+S
Sbjct: 68 MKICMLGDA-QHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASES 120
>dbj|BAB91757.1| putative 60S ribosomal protein [Oryza sativa (japonica
cultivar-group)]
Length = 238
Score = 129 bits (324), Expect(2) = 1e-58
Identities = 69/124 (55%), Positives = 83/124 (66%), Gaps = 24/124 (19%)
Frame = +1
Query: 352 VIKQIPRLLGPGLNKAGK----------------------FPAPIN--KNLEEMVLDTKC 459
+IKQIPRLLGPGLNKAGK FP + ++LE V +TK
Sbjct: 115 IIKQIPRLLGPGLNKAGKILLVYGRSILKSSYIIVSKRGKFPTLVTHQESLESKVNETKA 174
Query: 460 SIKFQLKKVLCMGVAVANVGMTEGEIRTNIMYAINFLVSLLKKNWQNVRCLYIKSTMGKP 639
++KFQLKKVLCMGVAV N M E +I N+ ++NFLVSLLKKNWQNVRCLY+KSTMGK
Sbjct: 175 TVKFQLKKVLCMGVAVGNCAMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKV 234
Query: 640 IRIY 651
IR++
Sbjct: 235 IRVF 238
Score = 121 bits (303), Expect(2) = 1e-58
Identities = 65/115 (56%), Positives = 80/115 (69%)
Frame = +3
Query: 6 MSKISNDVLRESVSALVEGAKTKPRKFQETVELQIGLKNYDPQKDKRFSGSVRLALRASP 185
MSK+ +D LRE++S + ++ K RKF ET+ELQIGLKNYDPQKDKRFSGSV+L P
Sbjct: 1 MSKLQSDALREAISQITSESREKQRKFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
Query: 186 PACACACWVM*STVSSAGAIGVDAKGVEDLKKLNKNKKLVKKLAQAYHAFLASDS 350
C V A +G+D VE LKK+NKNKKLVKKLA+ YHAFLAS++
Sbjct: 61 KMKVCMLGDA-QHVEEAEKMGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEA 114
