Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000101A_C02 KCC000101A_c02
(2012 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P04690|TBB_CHLRE TUBULIN BETA-1/BETA-2 CHAIN gi|71591|pir||UB... 790 0.0
sp|O04386|TBB_CHLIN Tubulin beta chain gi|2155306|gb|AAB60936.1|... 790 0.0
sp|P11482|TBB1_VOLCA Tubulin beta-1/beta-2 chain gi|81292|pir||S... 789 0.0
pir||MZ0005 tubulin beta-2 chain - green alga (Polytomella agili... 781 0.0
sp|P22852|TBB_POLAG TUBULIN BETA CHAIN gi|81224|pir||JQ0177 tubu... 781 0.0
>sp|P04690|TBB_CHLRE TUBULIN BETA-1/BETA-2 CHAIN gi|71591|pir||UBKM tubulin beta chain -
Chlamydomonas reinhardtii gi|167456|gb|AAA33101.1| beta-1
tubulin gi|167458|gb|AAA33102.1| beta-2 tubulin
Length = 443
Score = 790 bits (2041), Expect(3) = 0.0
Identities = 387/387 (100%), Positives = 387/387 (100%)
Frame = +2
Query: 257 GRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSV 436
GRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSV
Sbjct: 57 GRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSV 116
Query: 437 LDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVS 616
LDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVS
Sbjct: 117 LDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVS 176
Query: 617 DTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGI 796
DTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGI
Sbjct: 177 DTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGI 236
Query: 797 TCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDA 976
TCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDA
Sbjct: 237 TCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDA 296
Query: 977 KNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDI 1156
KNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDI
Sbjct: 297 KNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDI 356
Query: 1157 PPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 1336
PPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN
Sbjct: 357 PPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
Query: 1337 DLVSEYQQYQDASAEEEGEFEGEEEEA 1417
DLVSEYQQYQDASAEEEGEFEGEEEEA
Sbjct: 417 DLVSEYQQYQDASAEEEGEFEGEEEEA 443
Score = 98.6 bits (244), Expect(3) = 0.0
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 87 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQL 218
MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQL
Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQL 44
Score = 25.4 bits (54), Expect(3) = 0.0
Identities = 10/11 (90%), Positives = 11/11 (99%)
Frame = +1
Query: 220 QRINVYFNEAT 252
+RINVYFNEAT
Sbjct: 45 ERINVYFNEAT 55
>sp|O04386|TBB_CHLIN Tubulin beta chain gi|2155306|gb|AAB60936.1| beta tubulin
[Chlamydomonas incerta]
Length = 443
Score = 790 bits (2041), Expect(3) = 0.0
Identities = 387/387 (100%), Positives = 387/387 (100%)
Frame = +2
Query: 257 GRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSV 436
GRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSV
Sbjct: 57 GRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSV 116
Query: 437 LDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVS 616
LDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVS
Sbjct: 117 LDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVS 176
Query: 617 DTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGI 796
DTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGI
Sbjct: 177 DTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGI 236
Query: 797 TCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDA 976
TCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDA
Sbjct: 237 TCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDA 296
Query: 977 KNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDI 1156
KNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDI
Sbjct: 297 KNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDI 356
Query: 1157 PPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 1336
PPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN
Sbjct: 357 PPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
Query: 1337 DLVSEYQQYQDASAEEEGEFEGEEEEA 1417
DLVSEYQQYQDASAEEEGEFEGEEEEA
Sbjct: 417 DLVSEYQQYQDASAEEEGEFEGEEEEA 443
Score = 98.2 bits (243), Expect(3) = 0.0
Identities = 43/44 (97%), Positives = 44/44 (99%)
Frame = +3
Query: 87 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQL 218
MREIVHIQGGQCGNQIGAKFWEVVSDEHG+DPTGTYHGDSDLQL
Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGVDPTGTYHGDSDLQL 44
Score = 25.4 bits (54), Expect(3) = 0.0
Identities = 10/11 (90%), Positives = 11/11 (99%)
Frame = +1
Query: 220 QRINVYFNEAT 252
+RINVYFNEAT
Sbjct: 45 ERINVYFNEAT 55
>sp|P11482|TBB1_VOLCA Tubulin beta-1/beta-2 chain gi|81292|pir||S04695 tubulin beta chain -
Volvox carteri f. nagariensis gi|1361957|pir||JC4178 beta
2-tubulin - Volvox carteri gi|22003|emb|CAA31334.1|
beta-1 tubulin [Volvox carteri] gi|404091|gb|AAA99439.1|
beta-2 tubulin
Length = 443
Score = 789 bits (2037), Expect(3) = 0.0
Identities = 386/386 (100%), Positives = 386/386 (100%)
Frame = +2
Query: 257 GRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSV 436
GRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSV
Sbjct: 57 GRYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSV 116
Query: 437 LDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVS 616
LDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVS
Sbjct: 117 LDVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVS 176
Query: 617 DTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGI 796
DTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGI
Sbjct: 177 DTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGI 236
Query: 797 TCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDA 976
TCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDA
Sbjct: 237 TCCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDA 296
Query: 977 KNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDI 1156
KNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDI
Sbjct: 297 KNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDI 356
Query: 1157 PPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 1336
PPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN
Sbjct: 357 PPKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMN 416
Query: 1337 DLVSEYQQYQDASAEEEGEFEGEEEE 1414
DLVSEYQQYQDASAEEEGEFEGEEEE
Sbjct: 417 DLVSEYQQYQDASAEEEGEFEGEEEE 442
Score = 98.6 bits (244), Expect(3) = 0.0
Identities = 44/44 (100%), Positives = 44/44 (100%)
Frame = +3
Query: 87 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQL 218
MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQL
Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQL 44
Score = 25.4 bits (54), Expect(3) = 0.0
Identities = 10/11 (90%), Positives = 11/11 (99%)
Frame = +1
Query: 220 QRINVYFNEAT 252
+RINVYFNEAT
Sbjct: 45 ERINVYFNEAT 55
>pir||MZ0005 tubulin beta-2 chain - green alga (Polytomella agilis)
gi|169436|gb|AAA33803.1| beta-2 tubulin (beta-2-tub)
Length = 443
Score = 781 bits (2016), Expect(3) = 0.0
Identities = 383/385 (99%), Positives = 383/385 (99%)
Frame = +2
Query: 260 RYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVL 439
RYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVL
Sbjct: 58 RYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVL 117
Query: 440 DVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSD 619
DVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSD
Sbjct: 118 DVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSD 177
Query: 620 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGIT 799
TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGIT
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGIT 237
Query: 800 CCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAK 979
CCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAK
Sbjct: 238 CCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAK 297
Query: 980 NMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP 1159
NMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP
Sbjct: 298 NMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP 357
Query: 1160 PKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 1339
PKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 1340 LVSEYQQYQDASAEEEGEFEGEEEE 1414
LVSEYQQYQDASAEEEGEF EEEE
Sbjct: 418 LVSEYQQYQDASAEEEGEFGEEEEE 442
Score = 90.9 bits (224), Expect(3) = 0.0
Identities = 42/44 (95%), Positives = 42/44 (95%)
Frame = +3
Query: 87 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQL 218
MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGT GDSDLQL
Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTAIGDSDLQL 44
Score = 25.4 bits (54), Expect(3) = 0.0
Identities = 10/11 (90%), Positives = 11/11 (99%)
Frame = +1
Query: 220 QRINVYFNEAT 252
+RINVYFNEAT
Sbjct: 45 ERINVYFNEAT 55
>sp|P22852|TBB_POLAG TUBULIN BETA CHAIN gi|81224|pir||JQ0177 tubulin beta chain - green
alga (Polytomella agilis) gi|169434|gb|AAB03892.1| beta-1
tubulin (beta-1-tub) gi|169438|gb|AAA33804.1| beta-3
tubulin (beta-3-tub)
Length = 443
Score = 781 bits (2016), Expect(2) = 0.0
Identities = 383/385 (99%), Positives = 383/385 (99%)
Frame = +2
Query: 260 RYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVL 439
RYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVL
Sbjct: 58 RYVPRAILMDLEPGTMDSVRSGPYGQIFRPDNFVFGQTGAGNNWAKGHYTEGAELIDSVL 117
Query: 440 DVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSD 619
DVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSD
Sbjct: 118 DVVRKEAESCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVVPSPKVSD 177
Query: 620 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGIT 799
TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGIT
Sbjct: 178 TVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPTFGDLNHLISAVMSGIT 237
Query: 800 CCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAK 979
CCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAK
Sbjct: 238 CCLRFPGQLNADLRKLAVNLIPFPRLHFFMVGFTPLTSRGSQQYRALTVPELTQQMWDAK 297
Query: 980 NMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP 1159
NMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP
Sbjct: 298 NMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNVKSSVCDIP 357
Query: 1160 PKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 1339
PKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND
Sbjct: 358 PKGLKMSATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMND 417
Query: 1340 LVSEYQQYQDASAEEEGEFEGEEEE 1414
LVSEYQQYQDASAEEEGEF EEEE
Sbjct: 418 LVSEYQQYQDASAEEEGEFGEEEEE 442
Score = 90.9 bits (224), Expect(2) = 0.0
Identities = 42/44 (95%), Positives = 42/44 (95%)
Frame = +3
Query: 87 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTYHGDSDLQL 218
MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGT GDSDLQL
Sbjct: 1 MREIVHIQGGQCGNQIGAKFWEVVSDEHGIDPTGTALGDSDLQL 44
