Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000089A_C01 KCC000089A_c01
(1318 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P41095|RLA0_ORYSA 60S ACIDIC RIBOSOMAL PROTEIN P0 gi|7440742|... 174 9e-81
gb|AAF34767.1|AF227622_1 60S acidic ribosomal protein PO [Euphor... 172 5e-80
ref|NP_187531.1| 60S acidic ribosomal protein P0 (RPP0B) [Arabid... 157 3e-76
gb|AAM63644.1| putative 60S acidic ribosomal protein P0 [Arabido... 157 4e-76
ref|NP_187734.1| 60S acidic ribosomal protein P0 (RPP0C) [Arabid... 154 4e-75
>sp|P41095|RLA0_ORYSA 60S ACIDIC RIBOSOMAL PROTEIN P0 gi|7440742|pir||T04309 acidic
ribosomal protein P0 - rice gi|455401|dbj|BAA04668.1|
acidic ribosomal protein P0 [Oryza sativa]
gi|29467534|dbj|BAC66723.1| 60S acidic ribosomal protein
P0 [Oryza sativa (japonica cultivar-group)]
Length = 319
Score = 174 bits (441), Expect(3) = 9e-81
Identities = 84/145 (57%), Positives = 113/145 (77%), Gaps = 4/145 (2%)
Frame = +1
Query: 616 ATLLAKLGVKPFKYGLLILKVIESGAVYDPKVMDITDEDMMASVIAGIREVAALSLGAQY 795
+ LLAKLG++PF YGL+I V +SG+V+ P+V+D+T++D+M +G+ VA++SL Y
Sbjct: 175 SALLAKLGIRPFSYGLVITNVYDSGSVFSPEVLDLTEDDLMEKFASGVSMVASVSLAISY 234
Query: 796 PTLAAAPHVIIDGYKNVLAIAVETDYTFPLAQKVKDYLADPSKFASAAPAAAAGG--APA 969
PT+AAAPH+ ++GYKNVLA+AVET+Y++P A K+K+YL DPSKFA AAP AA G AP+
Sbjct: 235 PTIAAAPHMFLNGYKNVLAVAVETEYSYPHADKIKEYLKDPSKFAVAAPVAADSGAAAPS 294
Query: 970 AKKEEPKKEEPSEEE--DMGFSLFD 1038
A KEE KKEEP EE D+G SLFD
Sbjct: 295 AAKEEEKKEEPEEESDGDLGMSLFD 319
Score = 127 bits (320), Expect(3) = 9e-81
Identities = 58/88 (65%), Positives = 74/88 (83%)
Frame = +3
Query: 351 GNVGIVFTNGDLSQVKDEIAKYKVGAPARVGAVAPEDVVIKAGGTGMDPSQTSFFQALGI 530
GNVG++FT GDL +V++E+AKYKVGAPARVG VAP DVV+ G TG+DPSQTSFFQ L I
Sbjct: 87 GNVGLIFTKGDLKEVREEVAKYKVGAPARVGLVAPVDVVVPPGNTGLDPSQTSFFQVLNI 146
Query: 531 ATKINKGTIEIVSDVVVVKAGERVGPSQ 614
TKINKGT+EI++ V ++K G++VG S+
Sbjct: 147 PTKINKGTVEIITPVELIKKGDKVGSSE 174
Score = 43.9 bits (102), Expect(3) = 9e-81
Identities = 21/43 (48%), Positives = 30/43 (68%)
Frame = +1
Query: 148 TQAFIVHADNVGSRQFMDIRKGPGAPGAVILMGKNTMMRFCVE 276
T+ I ADNVGS Q +IRKG +++LMGKNT++R C++
Sbjct: 26 TKVLIAVADNVGSNQLQEIRKGLRG-DSIVLMGKNTLIRRCIK 67
>gb|AAF34767.1|AF227622_1 60S acidic ribosomal protein PO [Euphorbia esula]
Length = 317
Score = 172 bits (436), Expect(3) = 5e-80
Identities = 87/146 (59%), Positives = 113/146 (76%), Gaps = 5/146 (3%)
Frame = +1
Query: 616 ATLLAKLGVKPFKYGLLILKVIESGAVYDPKVMDITDEDMMASVIAGIREVAALSLGAQY 795
A LLAKLG++PF YGL++ V +SG V+ P+V+++T++D+MA G+ + +L+L Y
Sbjct: 172 AALLAKLGIRPFSYGLVVQTVYDSGTVFSPEVLNLTEDDLMAKFAIGVSMITSLALSVSY 231
Query: 796 PTLAAAPHVIIDGYKNVLAIAVETDYTFPLAQKVKDYLADPSKFASA-APAAAA--GGAP 966
PTLAAAPH+ I+ YKNVLAIAV TDY+FP A KVK+YLADPSKFA A AP AAA AP
Sbjct: 232 PTLAAAPHMFINAYKNVLAIAVSTDYSFPQADKVKEYLADPSKFAVALAPVAAAAPADAP 291
Query: 967 AAKKEEPKKEEPSEE--EDMGFSLFD 1038
AA KEE KK+EP++E +D+GFSLFD
Sbjct: 292 AASKEEEKKDEPADESDDDLGFSLFD 317
Score = 128 bits (322), Expect(3) = 5e-80
Identities = 59/89 (66%), Positives = 74/89 (82%)
Frame = +3
Query: 348 QGNVGIVFTNGDLSQVKDEIAKYKVGAPARVGAVAPEDVVIKAGGTGMDPSQTSFFQALG 527
QGNVG++FT GDL +V +E+AKYKVGAPARVG VAP DVV+ G TG+DPSQTSFFQ L
Sbjct: 83 QGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVPPGNTGLDPSQTSFFQVLN 142
Query: 528 IATKINKGTIEIVSDVVVVKAGERVGPSQ 614
I TKINKGT+EI++ V ++K G++VG S+
Sbjct: 143 IPTKINKGTVEIITPVELIKKGDKVGSSE 171
Score = 42.4 bits (98), Expect(3) = 5e-80
Identities = 22/39 (56%), Positives = 28/39 (71%)
Frame = +1
Query: 148 TQAFIVHADNVGSRQFMDIRKGPGAPGAVILMGKNTMMR 264
+Q +V ADNVGS Q +IRKG +V+LMGKNTMM+
Sbjct: 23 SQILVVAADNVGSTQLQNIRKGLRG-DSVVLMGKNTMMK 60
>ref|NP_187531.1| 60S acidic ribosomal protein P0 (RPP0B) [Arabidopsis thaliana]
gi|19884289|sp|Q42112|RL0B_ARATH 60S acidic ribosomal
protein P0-B gi|6478915|gb|AAF14020.1|AC011436_4 putative
60S acidic ribosomal protein P0 [Arabidopsis thaliana]
gi|13877925|gb|AAK44040.1|AF370225_1 putative 60S acidic
ribosomal protein P0 [Arabidopsis thaliana]
gi|16323458|gb|AAL15223.1| putative 60S acidic ribosomal
protein P0 [Arabidopsis thaliana]
Length = 320
Score = 157 bits (397), Expect(3) = 3e-76
Identities = 82/147 (55%), Positives = 108/147 (72%), Gaps = 6/147 (4%)
Frame = +1
Query: 616 ATLLAKLGVKPFKYGLLILKVIESGAVYDPKVMDITDEDMMASVIAGIREVAALSLGAQY 795
A LLAKLG++PF YGL++ V ++G+V+ P+V+D+T++ ++ +GI V +L+L Y
Sbjct: 174 AALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSY 233
Query: 796 PTLAAAPHVIIDGYKNVLAIAVETDYTFPLAQKVKDYLADPSKFASAAPAA----AAGGA 963
PTLAAAPH+ I+ YKN LAIAV T+YTFP A+KVK+YL DPSKFA A+ AA A GGA
Sbjct: 234 PTLAAAPHMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGA 293
Query: 964 PAAKKEEPKKEEPSEEEDMG--FSLFD 1038
PAA K E K+E S+EED G F LFD
Sbjct: 294 PAAAKVEEKEE--SDEEDYGGDFGLFD 318
Score = 129 bits (324), Expect(3) = 3e-76
Identities = 59/89 (66%), Positives = 75/89 (83%)
Frame = +3
Query: 348 QGNVGIVFTNGDLSQVKDEIAKYKVGAPARVGAVAPEDVVIKAGGTGMDPSQTSFFQALG 527
QGNVG++FT GDL +V +E+AKYKVGAPARVG VAP DVV++ G TG+DPSQTSFFQ L
Sbjct: 85 QGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLN 144
Query: 528 IATKINKGTIEIVSDVVVVKAGERVGPSQ 614
I TKINKGT+EI++ V ++K G++VG S+
Sbjct: 145 IPTKINKGTVEIITPVELIKQGDKVGSSE 173
Score = 43.9 bits (102), Expect(3) = 3e-76
Identities = 23/39 (58%), Positives = 28/39 (70%)
Frame = +1
Query: 148 TQAFIVHADNVGSRQFMDIRKGPGAPGAVILMGKNTMMR 264
TQ +V ADNVGS Q +IRKG +V+LMGKNTMM+
Sbjct: 25 TQILVVAADNVGSTQLQNIRKGLRG-DSVVLMGKNTMMK 62
>gb|AAM63644.1| putative 60S acidic ribosomal protein P0 [Arabidopsis thaliana]
Length = 320
Score = 157 bits (397), Expect(3) = 4e-76
Identities = 82/147 (55%), Positives = 108/147 (72%), Gaps = 6/147 (4%)
Frame = +1
Query: 616 ATLLAKLGVKPFKYGLLILKVIESGAVYDPKVMDITDEDMMASVIAGIREVAALSLGAQY 795
A LLAKLG++PF YGL++ V ++G+V+ P+V+D+T++ ++ +GI V +L+L Y
Sbjct: 174 AALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSY 233
Query: 796 PTLAAAPHVIIDGYKNVLAIAVETDYTFPLAQKVKDYLADPSKFASAAPAA----AAGGA 963
PTLAAAPH+ I+ YKN LAIAV T+YTFP A+KVK+YL DPSKFA A+ AA A GGA
Sbjct: 234 PTLAAAPHMFINAYKNALAIAVATEYTFPQAEKVKEYLKDPSKFAVASVAAVSADAGGGA 293
Query: 964 PAAKKEEPKKEEPSEEEDMG--FSLFD 1038
PAA K E K+E S+EED G F LFD
Sbjct: 294 PAAAKVEEKEE--SDEEDYGGDFGLFD 318
Score = 129 bits (324), Expect(3) = 4e-76
Identities = 59/89 (66%), Positives = 75/89 (83%)
Frame = +3
Query: 348 QGNVGIVFTNGDLSQVKDEIAKYKVGAPARVGAVAPEDVVIKAGGTGMDPSQTSFFQALG 527
QGNVG++FT GDL +V +E+AKYKVGAPARVG VAP DVV++ G TG+DPSQTSFFQ L
Sbjct: 85 QGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLN 144
Query: 528 IATKINKGTIEIVSDVVVVKAGERVGPSQ 614
I TKINKGT+EI++ V ++K G++VG S+
Sbjct: 145 IPTKINKGTVEIITPVELIKQGDKVGSSE 173
Score = 43.5 bits (101), Expect(3) = 4e-76
Identities = 23/39 (58%), Positives = 28/39 (70%)
Frame = +1
Query: 148 TQAFIVHADNVGSRQFMDIRKGPGAPGAVILMGKNTMMR 264
TQ +V ADNVGS Q +IRKG +V+LMGKNTMM+
Sbjct: 25 TQILVVAADNVGSTQLQNIRKGL-LGDSVVLMGKNTMMK 62
>ref|NP_187734.1| 60S acidic ribosomal protein P0 (RPP0C) [Arabidopsis thaliana]
gi|12644551|sp|P57691|RL0C_ARATH 60S acidic ribosomal
protein P0-C gi|12321877|gb|AAG50973.1|AC073395_15 60S
acidic ribosomal protein, putative; 58619-59992
[Arabidopsis thaliana] gi|15810223|gb|AAL07229.1|
putative 60S acidic ribosomal protein [Arabidopsis
thaliana] gi|20259595|gb|AAM14140.1| putative 60S acidic
ribosomal protein [Arabidopsis thaliana]
Length = 323
Score = 154 bits (388), Expect(3) = 4e-75
Identities = 81/148 (54%), Positives = 108/148 (72%), Gaps = 7/148 (4%)
Frame = +1
Query: 616 ATLLAKLGVKPFKYGLLILKVIESGAVYDPKVMDITDEDMMASVIAGIREVAALSLGAQY 795
A LLAKLG++PF YGL++ V ++G+V+ P+V+D+T++ ++ +GI V +L+L Y
Sbjct: 174 AALLAKLGIRPFSYGLVVQSVYDNGSVFSPEVLDLTEDQLVEKFASGISMVTSLALAVSY 233
Query: 796 PTLAAAPHVIIDGYKNVLAIAVETDYTFPLAQKVKDYLADPSKF--ASAAPAAAAGG--- 960
PTLAAAPH+ I+ YKN LAIAV TDYTFP A+KVK++L DPSKF A+AA +A AGG
Sbjct: 234 PTLAAAPHMFINAYKNALAIAVATDYTFPQAEKVKEFLKDPSKFVVAAAAVSADAGGGSA 293
Query: 961 -APAAKKEEPKKEEPSEEE-DMGFSLFD 1038
A AA K E KKEE EE+ + GF LFD
Sbjct: 294 QAGAAAKVEEKKEESDEEDYEGGFGLFD 321
Score = 129 bits (324), Expect(3) = 4e-75
Identities = 59/89 (66%), Positives = 75/89 (83%)
Frame = +3
Query: 348 QGNVGIVFTNGDLSQVKDEIAKYKVGAPARVGAVAPEDVVIKAGGTGMDPSQTSFFQALG 527
QGNVG++FT GDL +V +E+AKYKVGAPARVG VAP DVV++ G TG+DPSQTSFFQ L
Sbjct: 85 QGNVGLIFTKGDLKEVSEEVAKYKVGAPARVGLVAPIDVVVQPGNTGLDPSQTSFFQVLN 144
Query: 528 IATKINKGTIEIVSDVVVVKAGERVGPSQ 614
I TKINKGT+EI++ V ++K G++VG S+
Sbjct: 145 IPTKINKGTVEIITPVELIKQGDKVGSSE 173
Score = 43.9 bits (102), Expect(3) = 4e-75
Identities = 23/39 (58%), Positives = 28/39 (70%)
Frame = +1
Query: 148 TQAFIVHADNVGSRQFMDIRKGPGAPGAVILMGKNTMMR 264
TQ +V ADNVGS Q +IRKG +V+LMGKNTMM+
Sbjct: 25 TQILVVAADNVGSTQLQNIRKGLRG-DSVVLMGKNTMMK 62
