Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000078A_C01 KCC000078A_c01
(528 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_826642.1| hypothetical protein [Streptomyces avermitilis ... 36 0.35
ref|XP_241632.2| collagen, type XVIII, alpha 1 [Rattus norvegicus] 35 0.46
ref|NP_001100.1| a disintegrin and metalloproteinase domain 8 pr... 35 0.59
gb|AAC52902.1| alpha-1(XVIII) collagen [Mus musculus] 35 0.59
ref|ZP_00012193.1| COG0247: Fe-S oxidoreductase [Rhodopseudomona... 35 0.59
>ref|NP_826642.1| hypothetical protein [Streptomyces avermitilis MA-4680]
gi|29609126|dbj|BAC73177.1| hypothetical protein
[Streptomyces avermitilis MA-4680]
Length = 1387
Score = 35.8 bits (81), Expect = 0.35
Identities = 29/81 (35%), Positives = 37/81 (44%), Gaps = 6/81 (7%)
Frame = -2
Query: 263 MVVQS*QPTS--GGGAEVKRGR----*VCPKEYERKAEQEPRPRDEEFATHHQNMIEAGM 102
++V QPTS GGG KRGR P E+E + QEP P DE A +
Sbjct: 1021 VIVHMEQPTSVGGGGKRKKRGRGGAEQELPHEHEHELAQEPEP-DEAVAETEAEVAAEVA 1079
Query: 101 KDVDIPGPRLQPQHWEAWSDA 39
V +P P +P E +S A
Sbjct: 1080 APVALPAPGYEPDE-ELYSSA 1099
>ref|XP_241632.2| collagen, type XVIII, alpha 1 [Rattus norvegicus]
Length = 1692
Score = 35.4 bits (80), Expect = 0.46
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +2
Query: 167 APPSFHTLLGTLTARVSPPPLRQTLAVTIVRPSMPPPHP 283
+P S T GTL P P + +L + RPS+PPP P
Sbjct: 231 SPDSQTTEAGTLAVPTQPTPFQSSLQAPLGRPSVPPPSP 269
>ref|NP_001100.1| a disintegrin and metalloproteinase domain 8 precursor [Homo
sapiens] gi|2499914|sp|P78325|AD08_HUMAN ADAM 8
precursor (A disintegrin and metalloproteinase domain 8)
(Cell surface antigen MS2) (CD156a antigen) (CD156)
gi|1864005|dbj|BAA05626.1| transmembrane protein [Homo
sapiens]
Length = 824
Score = 35.0 bits (79), Expect = 0.59
Identities = 18/56 (32%), Positives = 23/56 (40%)
Frame = -1
Query: 447 VCKHVS*ARGRRKRCVPPRDAMKSCCSEGRCMRVQRAPCAALTHTRISSCMAMPLG 280
VC ++ RG + C PP D CC+ C + A CA T C P G
Sbjct: 410 VCGNLFVERGEQCDCGPPEDCRNRCCNSTTCQLAEGAQCA--HGTCCQECKVKPAG 463
>gb|AAC52902.1| alpha-1(XVIII) collagen [Mus musculus]
Length = 1527
Score = 35.0 bits (79), Expect = 0.59
Identities = 23/86 (26%), Positives = 35/86 (39%)
Frame = +2
Query: 47 TKPPSVEAATVARVCQHLSCRLQSCSGDVWQTLRLAAWALAPPSFHTLLGTLTARVSPPP 226
T+ P TV LS Q +W + + + +P + T GTL PP
Sbjct: 164 TEVPDSSIPTVLPSPAELSSAPQGSKTTLWLSSAIPS---SPDAQTTEAGTLAVPTQLPP 220
Query: 227 LRQTLAVTIVRPSMPPPHPNGIAMQL 304
+ L + RPS PP P +A ++
Sbjct: 221 FQSNLQAPLGRPSAPPDFPENVAEEV 246
>ref|ZP_00012193.1| COG0247: Fe-S oxidoreductase [Rhodopseudomonas palustris]
Length = 463
Score = 35.0 bits (79), Expect = 0.59
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 2/78 (2%)
Frame = +2
Query: 56 PSVEAATVARVCQHLSCRLQSCSGDVW--QTLRLAAWALAPPSFHTLLGTLTARVSPPPL 229
P +AA A+VC L ++C V+ Q L +AA A AP A P
Sbjct: 374 PIADAAAAAKVCAALGSADRACEASVYDGQRLPMAAPASAPQ----------AAPQRPVR 423
Query: 230 RQTLAVTIVRPSMPPPHP 283
R VT+ +P PPP P
Sbjct: 424 RHRERVTLQQPEPPPPPP 441
