KCC000072A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000072A_C01 KCC000072A_c01
CGAACAAACTGTGGCGCGAAGGTGGAGAAAGGGCTGGCCACACCGCAGGCCTGCTGCAGT
TGGTGGTGCGATAGTAATATGTCATAAATGCCGGCACTTATTTTATTCGGCCGGCGCTGG
CATATTGCGGCTGATGACCTGCCGATTCCCAGCCTTGCTGGTGCGGTCTGGCACCTCGGT
TGGGAGGTCCCTATCGCCGTAGCGCTGGCGTATGTTGTGTACCAATGGGACCCGGAAACG
TGCCCGCAGCGCAATAAGCACATAGGTTTTCTTGCCTGCCAGGTGTTCTGCTTCTTTACC
AATGGCCTGCTTCACACGTGGTGCTTCTTCGAGAGCAAGCGCGGCTCCATATTTCAGACG
CACCGCCGCCGCCGCGTGGGACCCCTGGTCATGTCGGTGCTCGTCTTCTACCTGCTCACC
ATCGGCAACACCACCTTCGGAACCGTCATCACCACGCAGCTGCTCTTCGAGGAACCCTGC
GTGCCACTGACGGGCGCCCTCACGCTCAGCTACCCCGACCTGCTTCGCCGCCCTCATCAT
CATTACCTGGATCGCCATGATGGTGGGCTTCATCGCGCTCGTGATAACCTACAACCTTTT
CCCTGCCTACTCG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000072A_C01 KCC000072A_c01
         (613 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_741085.1| triacylglycerol lipase and aldehyde dehydrogena...    47  5e-05
pir||T16353 hypothetical protein F42G9.6 - Caenorhabditis elegans      47  5e-05
ref|NP_741084.1| triacylglycerol lipase and aldehyde dehydrogena...    47  5e-05
ref|XP_320362.1| ENSANGP00000014014 [Anopheles gambiae] gi|21287...    47  2e-04
ref|XP_309132.1| ENSANGP00000018691 [Anopheles gambiae] gi|21292...    45  0.001

>ref|NP_741085.1| triacylglycerol lipase and aldehyde dehydrogenase ALDH9B1, with
           some 3' 5' overlap, ALdehyde deHydrogenase (alh-11Co)
           [Caenorhabditis elegans]
           gi|20901974|gb|AAM29695.1|U00051_8 Hypothetical protein
           F42G9.6b [Caenorhabditis elegans]
          Length = 683

 Score = 46.6 bits (109), Expect(2) = 5e-05
 Identities = 33/120 (27%), Positives = 54/120 (44%)
 Frame = +1

Query: 88  MPALILFGRRWHIAADDLPIPSLAGAVWHLGWEVPIAVALAYVVYQWDPETCPQRNKHIG 267
           MP+L+ F R+W+I +DD   P +  A+  L W   +A  ++  V+ + P  C   N  + 
Sbjct: 1   MPSLVAFNRQWNIGSDDFVFPEITEALVRLSW---VAFGVSVFVFHF-PLACSTHNLTLQ 56

Query: 268 FLACQVFCFFTNGLLHTWCFFESKRGSIFQTHRRRRVGPLVMSVLVFYLLTIGNTTFGTV 447
            L   V    T  LL       S RG+I  +  R+ +  L+   L  ++  I  T   T+
Sbjct: 57  LLGLLVINVITI-LLAILTAVISARGTIMNSQPRKLIPRLLYIRLPIFIAEIALTILATI 115

 Score = 21.9 bits (45), Expect(2) = 5e-05
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 536 IIITWIAMMVGFIALVITYNL 598
           II+ W  +   F  LVI ++L
Sbjct: 137 IILEWFLIFTAFAGLVIVFHL 157

>pir||T16353 hypothetical protein F42G9.6 - Caenorhabditis elegans
          Length = 681

 Score = 46.6 bits (109), Expect(2) = 5e-05
 Identities = 33/120 (27%), Positives = 54/120 (44%)
 Frame = +1

Query: 88  MPALILFGRRWHIAADDLPIPSLAGAVWHLGWEVPIAVALAYVVYQWDPETCPQRNKHIG 267
           MP+L+ F R+W+I +DD   P +  A+  L W   +A  ++  V+ + P  C   N  + 
Sbjct: 1   MPSLVAFNRQWNIGSDDFVFPEITEALVRLSW---VAFGVSVFVFHF-PLACSTHNLTLQ 56

Query: 268 FLACQVFCFFTNGLLHTWCFFESKRGSIFQTHRRRRVGPLVMSVLVFYLLTIGNTTFGTV 447
            L   V    T  LL       S RG+I  +  R+ +  L+   L  ++  I  T   T+
Sbjct: 57  LLGLLVINVITI-LLAILTAVISARGTIMNSQPRKLIPRLLYIRLPIFIAEIALTILATI 115

 Score = 21.9 bits (45), Expect(2) = 5e-05
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 536 IIITWIAMMVGFIALVITYNL 598
           II+ W  +   F  LVI ++L
Sbjct: 137 IILEWFLIFTAFAGLVIVFHL 157

>ref|NP_741084.1| triacylglycerol lipase and aldehyde dehydrogenase ALDH9B1, with
           some 3' 5' overlap, ALdehyde deHydrogenase (alh-11Co)
           [Caenorhabditis elegans]
           gi|20901973|gb|AAM29694.1|U00051_7 Hypothetical protein
           F42G9.6a [Caenorhabditis elegans]
          Length = 657

 Score = 46.6 bits (109), Expect(2) = 5e-05
 Identities = 33/120 (27%), Positives = 54/120 (44%)
 Frame = +1

Query: 88  MPALILFGRRWHIAADDLPIPSLAGAVWHLGWEVPIAVALAYVVYQWDPETCPQRNKHIG 267
           MP+L+ F R+W+I +DD   P +  A+  L W   +A  ++  V+ + P  C   N  + 
Sbjct: 1   MPSLVAFNRQWNIGSDDFVFPEITEALVRLSW---VAFGVSVFVFHF-PLACSTHNLTLQ 56

Query: 268 FLACQVFCFFTNGLLHTWCFFESKRGSIFQTHRRRRVGPLVMSVLVFYLLTIGNTTFGTV 447
            L   V    T  LL       S RG+I  +  R+ +  L+   L  ++  I  T   T+
Sbjct: 57  LLGLLVINVITI-LLAILTAVISARGTIMNSQPRKLIPRLLYIRLPIFIAEIALTILATI 115

 Score = 21.9 bits (45), Expect(2) = 5e-05
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +2

Query: 536 IIITWIAMMVGFIALVITYNL 598
           II+ W  +   F  LVI ++L
Sbjct: 137 IILEWFLIFTAFAGLVIVFHL 157

>ref|XP_320362.1| ENSANGP00000014014 [Anopheles gambiae] gi|21287838|gb|EAA00159.1|
           ENSANGP00000014014 [Anopheles gambiae str. PEST]
          Length = 657

 Score = 47.4 bits (111), Expect = 2e-04
 Identities = 32/120 (26%), Positives = 51/120 (41%)
 Frame = +1

Query: 88  MPALILFGRRWHIAADDLPIPSLAGAVWHLGWEVPIAVALAYVVYQWDPETCPQRNKHIG 267
           MPAL LFGR+W  A+DDL  P +    + + W                          +G
Sbjct: 1   MPALRLFGRKWLAASDDLVFPCVFEICFRIVW--------------------------LG 34

Query: 268 FLACQVFCFFTNGLLHTWCFFESKRGSIFQTHRRRRVGPLVMSVLVFYLLTIGNTTFGTV 447
            ++C    ++    +   C   S +GSI + H+RR V PL++  ++  L   G    GT+
Sbjct: 35  LISCVTSTYWN---VTEECVNRSAQGSITEVHKRRLVAPLLVIKILLILPETGLNVLGTM 91

>ref|XP_309132.1| ENSANGP00000018691 [Anopheles gambiae] gi|21292794|gb|EAA04939.1|
           ENSANGP00000018691 [Anopheles gambiae str. PEST]
          Length = 678

 Score = 44.7 bits (104), Expect = 0.001
 Identities = 35/123 (28%), Positives = 57/123 (45%), Gaps = 3/123 (2%)
 Frame = +1

Query: 88  MPALILFGRRWHIAADDLPIPSLAGAVWHLGWEVPIAVALAYVVYQWD-PETCPQRNKH- 261
           MP +++F RRW + +DDL +P L   V H  W V + V    + + +D  E C  +  + 
Sbjct: 1   MPGIVVFQRRWSVGSDDLVVPGLFLLVIHFIWLVVLMVMT--LTFHFDRAEYCILQLWYF 58

Query: 262 -IGFLACQVFCFFTNGLLHTWCFFESKRGSIFQTHRRRRVGPLVMSVLVFYLLTIGNTTF 438
            IG++     C      L       S RGSI  T  R  +  L+ + ++  L+ +G  T 
Sbjct: 59  QIGYMILLAVCM----CLELSICVVSMRGSILDTEPRASMQYLLYARVLLMLVDLGLLTA 114

Query: 439 GTV 447
           G +
Sbjct: 115 GII 117



EST assemble image


clone accession position
1 CL37b02_r AV395247 1 451
2 HCL056b11_r AV642697 1 470
3 CL03e04_r AV393427 139 613




Chlamydomonas reinhardtii
Kazusa DNA Research Institute