>KCC000067A_C03 KCC000067A_c03
CTCAGGGGTAGTTCTTACCCTTTTTTTCTGAACCTCTAGGACAGAAGACTTGGGAGGCTT
TCCAAGCCGAGGACCATCATGTCTGACGGAGAGGCTGCCCCTGTTGTGGTGGAGGAGGCC
GCCGCCCCCGGCGAGCCCATGGACATCAACACGGCCGTGCAGATGGTCCTGAAGAAGGCC
CTGGCCCACGATGGCCTGTGCCGTGGCCTGCACGAGGCCTGCCGCGCCATTGAGAAGGGC
CAGGCCCAGCTGTGCATCCTGGCCGAGGACTGCAACCAGCCCGACTACAAGAAGCTGATT
GAGGCCCTGTGCGCCGAGCACAACGTCAACCTGATCTCCGTGCCGGAGAACAAGCAGCTG
GGCCAGTGGTGCGGCCTGTGCAAGATCGACCCCCAGGGCGAGGCCCGCAAGGTGGTCGGC
TGCTCTTGCGCCGTCATCACCGACTACGGTGAGGAGACCGCCGGCCTGTCCATGCTGCAG
GAGTACCTGAAGAGCCGTTAAGCGGCCCTTCGGCTGCTCCGGATGGTTTCGAGGAGGGCG
GGAGATTAGTGTCTTCAGTCACCAATTTGTAACGCCGTGACCTC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000067A_C03 KCC000067A_c03
         (584 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC82908.1| putative ribosomal protein S12 [Oryza sativa (ja...   189  2e-47
sp|Q9XHS0|RS12_HORVU 40S ribosomal protein S12 gi|5106775|gb|AAD...   188  4e-47
dbj|BAC20920.1| putative 40S ribosomal protein S12 [Oryza sativa...   187  7e-47
gb|AAL79538.1|AF470687_1 40S ribosomal protein S12 [Branchiostom...   179  3e-44
gb|AAN52386.1| ribosomal protein S12 [Branchiostoma belcheri]         177  7e-44

>dbj|BAC82908.1| putative ribosomal protein S12 [Oryza sativa (japonica
           cultivar-group)]
          Length = 138

 Score =  189 bits (480), Expect = 2e-47
 Identities = 86/135 (63%), Positives = 110/135 (80%)
 Frame = +1

Query: 91  EAAPVVVEEAAAPGEPMDINTAVQMVLKKALAHDGLCRGLHEACRAIEKGQAQLCILAED 270
           E  PV    A   GEPMD+ TA+Q+V+KK+ AHDGL +GL EA +AIEK  AQLC+LAED
Sbjct: 3   EETPVETPAAPVLGEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62

Query: 271 CNQPDYKKLIEALCAEHNVNLISVPENKQLGQWCGLCKIDPQGEARKVVGCSCAVITDYG 450
           C+QPDY KL++ALCAEHNV+L++VP  K LG+W GLCKID +G+ARKVVGCSC V+ DYG
Sbjct: 63  CDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDYG 122

Query: 451 EETAGLSMLQEYLKS 495
           EE+ GL+++Q+Y+KS
Sbjct: 123 EESEGLNIVQDYVKS 137

>sp|Q9XHS0|RS12_HORVU 40S ribosomal protein S12 gi|5106775|gb|AAD39838.1|AF067732_1
           ribosomal protein S12 [Hordeum vulgare]
          Length = 143

 Score =  188 bits (478), Expect = 4e-47
 Identities = 89/143 (62%), Positives = 117/143 (81%), Gaps = 3/143 (2%)
 Frame = +1

Query: 79  MSDGEAAPVVVE-EAAAP--GEPMDINTAVQMVLKKALAHDGLCRGLHEACRAIEKGQAQ 249
           M++   APVV   EA  P  GEPMD+ TA+Q+V+KK+ AHDGL +GL EA ++IEK  AQ
Sbjct: 1   MAEEAPAPVVAPVEAPTPILGEPMDLMTALQLVMKKSSAHDGLVKGLREAAKSIEKHAAQ 60

Query: 250 LCILAEDCNQPDYKKLIEALCAEHNVNLISVPENKQLGQWCGLCKIDPQGEARKVVGCSC 429
           LC+LAEDC+QPDY KL++ALCAEHNV+L++VP  K LG+W GLCKID +G+ARKVVGCSC
Sbjct: 61  LCVLAEDCDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDTEGKARKVVGCSC 120

Query: 430 AVITDYGEETAGLSMLQEYLKSR 498
            V+ DYGEE+ GL+++Q+Y+KS+
Sbjct: 121 IVVKDYGEESEGLNIVQQYVKSQ 143

>dbj|BAC20920.1| putative 40S ribosomal protein S12 [Oryza sativa (japonica
           cultivar-group)]
          Length = 138

 Score =  187 bits (476), Expect = 7e-47
 Identities = 85/135 (62%), Positives = 110/135 (80%)
 Frame = +1

Query: 91  EAAPVVVEEAAAPGEPMDINTAVQMVLKKALAHDGLCRGLHEACRAIEKGQAQLCILAED 270
           E  PV    A   GEPMD+ TA+Q+V+KK+ AHDGL +GL EA +AIEK  AQLC+LAED
Sbjct: 3   EETPVEAPPAPVLGEPMDLMTALQLVMKKSSAHDGLVKGLREAAKAIEKHAAQLCVLAED 62

Query: 271 CNQPDYKKLIEALCAEHNVNLISVPENKQLGQWCGLCKIDPQGEARKVVGCSCAVITDYG 450
           C+QPDY KL++ALCAEHNV+L++VP  K LG+W GLCKID +G+ARKVVGCSC V+ D+G
Sbjct: 63  CDQPDYVKLVKALCAEHNVHLVTVPSAKTLGEWAGLCKIDSEGKARKVVGCSCVVVKDFG 122

Query: 451 EETAGLSMLQEYLKS 495
           EE+ GL+++Q+Y+KS
Sbjct: 123 EESEGLNIVQDYVKS 137

>gb|AAL79538.1|AF470687_1 40S ribosomal protein S12 [Branchiostoma belcheri]
          Length = 132

 Score =  179 bits (454), Expect = 3e-44
 Identities = 81/131 (61%), Positives = 102/131 (77%)
 Frame = +1

Query: 106 VVEEAAAPGEPMDINTAVQMVLKKALAHDGLCRGLHEACRAIEKGQAQLCILAEDCNQPD 285
           + E   A G PMDINTA+Q VLK AL HDGL RGLHEA +A++K QA LC+LA +C++P 
Sbjct: 1   MAEGGEASGGPMDINTALQEVLKNALIHDGLARGLHEAAKALDKRQAHLCVLANNCDEPM 60

Query: 286 YKKLIEALCAEHNVNLISVPENKQLGQWCGLCKIDPQGEARKVVGCSCAVITDYGEETAG 465
           Y KL+EALCAEH +NLI V +NK+LG+W GLCKID +G+ RKVVGCSC V+ DYG+ET  
Sbjct: 61  YVKLVEALCAEHGINLIKVDDNKKLGEWAGLCKIDREGKPRKVVGCSCVVVKDYGKETQA 120

Query: 466 LSMLQEYLKSR 498
           L ++ EY KS+
Sbjct: 121 LDVMNEYFKSK 131

>gb|AAN52386.1| ribosomal protein S12 [Branchiostoma belcheri]
          Length = 132

 Score =  177 bits (450), Expect = 7e-44
 Identities = 80/131 (61%), Positives = 101/131 (77%)
 Frame = +1

Query: 106 VVEEAAAPGEPMDINTAVQMVLKKALAHDGLCRGLHEACRAIEKGQAQLCILAEDCNQPD 285
           + E     G PMDINTA+Q VLK AL HDGL RGLHEA +A++K QA LC+LA +C++P 
Sbjct: 1   MAEGGECTGGPMDINTALQEVLKNALIHDGLARGLHEAAKALDKRQAHLCVLANNCDEPM 60

Query: 286 YKKLIEALCAEHNVNLISVPENKQLGQWCGLCKIDPQGEARKVVGCSCAVITDYGEETAG 465
           Y KL+EALCAEH +NLI V +NK+LG+W GLCKID +G+ RKVVGCSC V+ DYG+ET  
Sbjct: 61  YVKLVEALCAEHGINLIKVDDNKKLGEWAGLCKIDREGKPRKVVGCSCVVVKDYGKETQA 120

Query: 466 LSMLQEYLKSR 498
           L ++ EY KS+
Sbjct: 121 LDVMNEYFKSK 131

EST assemble image

clone accession position 1 CL35g10_r AV395086 1 601 2 CL15f07_r AV393960 11 626 3 CL60g10_r AV396391 14 612 4 CL56c09_r AV396110 18 598 5 CL64a08_r AV396629 21 568 6 CL36d09_r AV395146 21 599 7 CL19d03_r AV394183 24 606 8 CL49a09_r AV397723 35 576 9 CL50b08_r AV395767 36 613 10 LC011h10_r AV619700 96 635 11 CL54e07_r AV396149 99 629 12 CL57c07_r AV396298 101 586 13 CL04b02_r AV393369 102 559 14 CL27g05_r AV394707 103 625 15 CL66a10_r AV396747 103 658 16 CM024f06_r AV388282 105 690 17 CL75h10_r AV397061 105 626 18 CL63e05_r AV396548 105 654 19 CL18g11_r AV394051 105 619 20 MXL075b09_r BP097405 108 490 21 LC016e04_r AV620025 108 649 22 MXL012d02_r BP093708 109 646 23 CL37b01_r AV395246 109 619 24 HC024c08_r AV633710 109 512 25 CL12b01_r AV393826 111 534 26 CL27a09_r AV394704 111 564 27 CL10c06_r AV393661 112 612 28 HC017d01_r AV633148 112 532 29 MXL044a06_r BP095571 112 492 30 CL11c08_r AV393777 112 612 31 CL74g07_r AV396489 113 578 32 CL53b11_r AV395991 113 662 33 CL11g09_r AV393799 114 621 34 CL76b07_r AV397120 114 552 35 CL39d09_r AV395193 114 564 36 CL19c10_r AV394202 114 592 37 CL15b09_r AV393985 114 626 38 CL08d04_r AV393506 114 619 39 CL54e11_r AV396165 114 625 40 CL36e01_r AV395125 114 639 41 CL70h07_r AV396838 114 621 42 CL57c04_r AV396288 114 638 43 CL39a03_r AV395176 116 609 44 CL42d07_r AV395503 116 588 45 CL34a04_r AV394917 117 639 46 CL08e05_r AV393502 117 581 47 CL62h07_r AV396420 119 638 48 CL66h07_r AV396767 119 612 49 CL65c12_r AV396606 119 678 50 CL29e03_r AV394637 119 640 51 CM053f07_r AV389964 119 674 52 CL67d10_r AV396709 119 663 53 MX238h10_r BP091447 119 548 54 CL36f11_r AV395166 119 552 55 CL25f03_r AV394534 119 643 56 CL60a06_r AV396359 119 579 57 CL07a02_r AV393468 119 599 58 CM073d10_r AV391442 119 625 59 CM079h11_r AV391964 119 648 60 CL14g09_r AV393892 119 674 61 CL37e12_r AV395241 119 592 62 CL04c02_r AV393370 119 587 63 CL58b04_r AV396193 123 656 64 HCL092g01_r AV644711 125 525 65 CL15a12_r AV393963 126 627 66 CL46d12_r AV395667 126 674 67 CL27d02_r AV394685 127 580 68 CL77b06_r AV397267 128 678 69 HCL031d11_r AV641310 128 641 70 HCL001b11_r AV639573 128 412 71 CL03c11_r AV393407 128 625 72 CL30g09_r AV394772 128 662 73 CL20f07_r AV394288 128 613 74 CL24c03_r AV394433 128 593 75 CL23d08_r AV394467 128 627 76 CL10e08_r AV393691 128 637 77 CL36g09_r AV395153 128 585 78 CL16c09_r AV394001 128 638 79 CM056e10_r AV390329 128 616 80 CM039g07_r AV388926 128 657 81 CL34f02_r AV394888 128 655 82 CL65c05_r AV396559 131 654 83 CM096c07_r AV392736 132 586 84 CM019a04_r AV387314 133 620 85 CL17d09_r AV394113 142 653 86 MX103h07_r BP089023 150 678 87 HCL097a03_r AV645012 150 540 88 CL50g11_r AV395754 154 704 89 CL44h06_r AV395593 154 664 90 CL56d07_r AV396109 165 678 91 CL32b06_r AV394872 174 678 92 MX104d11_r BP089070 175 678 93 MX103h04_r BP089020 196 678 94 MX103b05_r BP088958 214 678 95 HC050c11_r AV635741 215 678 96 CL78f12_r AV397212 227 729 97 CL21h11_r AV394372 237 678 98 MX101b01_r BP088789 254 678 99 MX104a03_r BP089029 272 678 100 MX103g10_r BP089014 280 678 101 MX103g09_r BP089013 284 678 102 MX104d03_r BP089062 291 678

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