>KCC000052A_C01 KCC000052A_c01
GCACGAGGTTCTTGCTCCTAGGAAAGTCAAAATGGGCGGCGAGAACGTGCGCCTCTTCGT
TAAGGGCCACATTCTGGGCTACAAGCGGTCCAAGGCCAACCAGCAGAACCACACCGCGCT
GCTGAAGGTGGACGGCGTGGCTACCAAGAAGGAGGTGGCTTGGTACCTGGGCAAGCGCAT
TGCCTACATCTACAAGGCCAAGAACGAGAAGCAGGGCACCAAGTTCCGGTGCATTTGGGG
CCGTGTTATGCGTGCGCACGGCAACGTCGGCGTGGTGAAGGCCAAGTTCTCTTCCAACCT
GCCCCCGATCAGCCTGGGCGGCGCCGTCCGTGTGATGCTCTACCCCAGCCGCGTATGATG
GACCGCCGGCGGAGAGCGATGGGCTTGGGAGGCTGTTTCGGGCGGTCGCTGTTGAGCGGA
GCCATGTAACACCGTTTTAGTGCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAACAAAAA
CAAAACACACACAAGAAACAAACAAAAAAAAAAACTCGAGGGGGGGCCGGTACCATTCGC
CTATATGATCGATTAACGCCCAAGGCGCGTTACACGCGGATGGGAA

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000052A_C01 KCC000052A_c01
         (586 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK25760.1|AF334840_1 ribosomal protein L33 [Castanea sativa]      150  1e-35
ref|NP_172188.1| 60S ribosomal protein L35a (RPL35aA) [Arabidops...   150  2e-35
ref|NP_177567.1| 60S ribosomal protein L35a (RPL35aC) [Arabidops...   149  3e-35
ref|NP_174951.1| 60S ribosomal protein L35a (RPL35aB) [Arabidops...   148  5e-35
ref|NP_191134.1| 60S ribosomal protein L35a (RPL35aD) [Arabidops...   148  6e-35

>gb|AAK25760.1|AF334840_1 ribosomal protein L33 [Castanea sativa]
          Length = 112

 Score =  150 bits (379), Expect = 1e-35
 Identities = 67/106 (63%), Positives = 87/106 (81%)
 Frame = +2

Query: 38  GENVRLFVKGHILGYKRSKANQQNHTALLKVDGVATKKEVAWYLGKRIAYIYKAKNEKQG 217
           GE VRL+V+G ILGYKRSK+NQ  +T+L++++GV TK+EV WY GKR+AY+YKAK +K G
Sbjct: 7   GERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVGWYAGKRMAYVYKAKVKKDG 66

Query: 218 TKFRCIWGRVMRAHGNVGVVKAKFSSNLPPISLGGAVRVMLYPSRV 355
           + +RCIWG+V R HGN GVV+AKF SNLPP S+G  VRV +YPS +
Sbjct: 67  SHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112

>ref|NP_172188.1| 60S ribosomal protein L35a (RPL35aA) [Arabidopsis thaliana]
           gi|25295569|pir||E86205 hypothetical protein [imported]
           - Arabidopsis thaliana
           gi|8954039|gb|AAF82213.1|AC067971_21 Strong similarity
           to a ribosomal protein from Arabidopsis thaliana
           gb|AL161667.  It contains a ribosomal protein L35Ae
           domain PF|01247 gi|21555376|gb|AAM63844.1| ribosomal
           protein, putative [Arabidopsis thaliana]
           gi|26453120|dbj|BAC43636.1| unknown protein [Arabidopsis
           thaliana] gi|28416859|gb|AAO42960.1| At1g07070
           [Arabidopsis thaliana]
          Length = 112

 Score =  150 bits (378), Expect = 2e-35
 Identities = 68/106 (64%), Positives = 88/106 (82%)
 Frame = +2

Query: 38  GENVRLFVKGHILGYKRSKANQQNHTALLKVDGVATKKEVAWYLGKRIAYIYKAKNEKQG 217
           GE VRL+V+G ILGYKRSK+NQ  +T+L++V+GV T +EV+WY GKR+AYIYKAK +K G
Sbjct: 7   GERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNG 66

Query: 218 TKFRCIWGRVMRAHGNVGVVKAKFSSNLPPISLGGAVRVMLYPSRV 355
           + +RCIWG+V R HGN GVV+AKF+SNLPP S+G  VRV +YPS +
Sbjct: 67  SHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

>ref|NP_177567.1| 60S ribosomal protein L35a (RPL35aC) [Arabidopsis thaliana]
           gi|25295568|pir||B96771 protein ribosomal protein
           F1O17.6 [imported] - Arabidopsis thaliana
           gi|12324899|gb|AAG52401.1|AC020579_3 putative ribosomal
           protein; 23489-24540 [Arabidopsis thaliana]
           gi|13878115|gb|AAK44135.1|AF370320_1 putative ribosomal
           protein [Arabidopsis thaliana]
           gi|17104787|gb|AAL34282.1| putative ribosomal protein
           [Arabidopsis thaliana] gi|21554085|gb|AAM63166.1|
           putative ribosomal protein [Arabidopsis thaliana]
          Length = 112

 Score =  149 bits (376), Expect = 3e-35
 Identities = 67/106 (63%), Positives = 88/106 (82%)
 Frame = +2

Query: 38  GENVRLFVKGHILGYKRSKANQQNHTALLKVDGVATKKEVAWYLGKRIAYIYKAKNEKQG 217
           GE VRL+V+G ILGYKRSK+NQ  +T+L++++GV T++EV WY GKR+AYIYKAK +K G
Sbjct: 7   GERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNG 66

Query: 218 TKFRCIWGRVMRAHGNVGVVKAKFSSNLPPISLGGAVRVMLYPSRV 355
           + +RCIWG+V R HGN GVV+AKF+SNLPP S+G  VRV +YPS +
Sbjct: 67  SHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

>ref|NP_174951.1| 60S ribosomal protein L35a (RPL35aB) [Arabidopsis thaliana]
           gi|25295567|pir||D96492 probable ribosomal protein
           [imported] - Arabidopsis thaliana
           gi|9802763|gb|AAF99832.1|AC008046_4 Putative ribosomal
           protein [Arabidopsis thaliana]
           gi|13899109|gb|AAK48976.1|AF370549_1 Putative ribosomal
           protein [Arabidopsis thaliana]
           gi|21536737|gb|AAM61069.1| ribosomal protein
           [Arabidopsis thaliana] gi|30102814|gb|AAP21325.1|
           At1g41880 [Arabidopsis thaliana]
          Length = 111

 Score =  148 bits (374), Expect = 5e-35
 Identities = 65/106 (61%), Positives = 88/106 (82%)
 Frame = +2

Query: 38  GENVRLFVKGHILGYKRSKANQQNHTALLKVDGVATKKEVAWYLGKRIAYIYKAKNEKQG 217
           GE VRL+V+G +LGYKRSK+NQ  +T+L++++GV T++EV WY GKR+AYIYKAK +K G
Sbjct: 6   GERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNG 65

Query: 218 TKFRCIWGRVMRAHGNVGVVKAKFSSNLPPISLGGAVRVMLYPSRV 355
           + +RCIWG+V R HGN GVV++KF+SNLPP S+G  VRV +YPS +
Sbjct: 66  SHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

>ref|NP_191134.1| 60S ribosomal protein L35a (RPL35aD) [Arabidopsis thaliana]
           gi|27735243|sp|P51422|R35A_ARATH 60S ribosomal protein
           L35a gi|11276881|pir||T47714 ribosomal protein L35a,
           cytosolic [similarity] - Arabidopsis thaliana
           gi|7263563|emb|CAB81600.1| ribosomal protein
           [Arabidopsis thaliana] gi|15450625|gb|AAK96584.1|
           AT3g55750/F1I16_160 [Arabidopsis thaliana]
           gi|17386164|gb|AAL38628.1|AF446895_1 AT3g55750/F1I16_160
           [Arabidopsis thaliana] gi|21593235|gb|AAM65184.1|
           ribosomal protein L35a-like [Arabidopsis thaliana]
          Length = 111

 Score =  148 bits (373), Expect = 6e-35
 Identities = 65/106 (61%), Positives = 88/106 (82%)
 Frame = +2

Query: 38  GENVRLFVKGHILGYKRSKANQQNHTALLKVDGVATKKEVAWYLGKRIAYIYKAKNEKQG 217
           GE VRL+V+G +LGYKRSK+NQ  +T+L++++GV T++EV WY GKR+AYIYKAK +K G
Sbjct: 6   GERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNG 65

Query: 218 TKFRCIWGRVMRAHGNVGVVKAKFSSNLPPISLGGAVRVMLYPSRV 355
           + +RCIWG+V R HGN GVV++KF+SNLPP S+G  VRV +YPS +
Sbjct: 66  SHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

EST assemble image

clone accession position 1 CL16f12_r AV394024 1 472 2 CL46d07_r AV395654 9 625 3 CL68d10_r AV396933 9 554 4 CM071d08_r AV391381 30 509 5 CM017a05_r AV388205 90 695 6 CL16f10_r AV394006 97 562 7 CL02h02_r AV397587 98 543 8 CL79d09_r AV397179 98 554 9 HCL095c07_r AV644899 99 559 10 CM064g10_r AV391022 101 677 11 HC034a01_r AV634482 101 552 12 MXL030g10_r BP094837 102 470 13 CL78h09_r AV397240 102 546 14 CL09b11_r AV393703 106 551 15 CL02d11_r AV397590 112 552 16 CL15f12_r AV393967 113 489 17 HCL097h02_r AV645072 262 542 18 HCL097h03_r AV645072 283 537 19 HCL049f06_r AV642318 387 551

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