Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000052A_C01 KCC000052A_c01
(586 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK25760.1|AF334840_1 ribosomal protein L33 [Castanea sativa] 150 1e-35
ref|NP_172188.1| 60S ribosomal protein L35a (RPL35aA) [Arabidops... 150 2e-35
ref|NP_177567.1| 60S ribosomal protein L35a (RPL35aC) [Arabidops... 149 3e-35
ref|NP_174951.1| 60S ribosomal protein L35a (RPL35aB) [Arabidops... 148 5e-35
ref|NP_191134.1| 60S ribosomal protein L35a (RPL35aD) [Arabidops... 148 6e-35
>gb|AAK25760.1|AF334840_1 ribosomal protein L33 [Castanea sativa]
Length = 112
Score = 150 bits (379), Expect = 1e-35
Identities = 67/106 (63%), Positives = 87/106 (81%)
Frame = +2
Query: 38 GENVRLFVKGHILGYKRSKANQQNHTALLKVDGVATKKEVAWYLGKRIAYIYKAKNEKQG 217
GE VRL+V+G ILGYKRSK+NQ +T+L++++GV TK+EV WY GKR+AY+YKAK +K G
Sbjct: 7 GERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEEVGWYAGKRMAYVYKAKVKKDG 66
Query: 218 TKFRCIWGRVMRAHGNVGVVKAKFSSNLPPISLGGAVRVMLYPSRV 355
+ +RCIWG+V R HGN GVV+AKF SNLPP S+G VRV +YPS +
Sbjct: 67 SHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGARVRVFMYPSNI 112
>ref|NP_172188.1| 60S ribosomal protein L35a (RPL35aA) [Arabidopsis thaliana]
gi|25295569|pir||E86205 hypothetical protein [imported]
- Arabidopsis thaliana
gi|8954039|gb|AAF82213.1|AC067971_21 Strong similarity
to a ribosomal protein from Arabidopsis thaliana
gb|AL161667. It contains a ribosomal protein L35Ae
domain PF|01247 gi|21555376|gb|AAM63844.1| ribosomal
protein, putative [Arabidopsis thaliana]
gi|26453120|dbj|BAC43636.1| unknown protein [Arabidopsis
thaliana] gi|28416859|gb|AAO42960.1| At1g07070
[Arabidopsis thaliana]
Length = 112
Score = 150 bits (378), Expect = 2e-35
Identities = 68/106 (64%), Positives = 88/106 (82%)
Frame = +2
Query: 38 GENVRLFVKGHILGYKRSKANQQNHTALLKVDGVATKKEVAWYLGKRIAYIYKAKNEKQG 217
GE VRL+V+G ILGYKRSK+NQ +T+L++V+GV T +EV+WY GKR+AYIYKAK +K G
Sbjct: 7 GERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNG 66
Query: 218 TKFRCIWGRVMRAHGNVGVVKAKFSSNLPPISLGGAVRVMLYPSRV 355
+ +RCIWG+V R HGN GVV+AKF+SNLPP S+G VRV +YPS +
Sbjct: 67 SHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
>ref|NP_177567.1| 60S ribosomal protein L35a (RPL35aC) [Arabidopsis thaliana]
gi|25295568|pir||B96771 protein ribosomal protein
F1O17.6 [imported] - Arabidopsis thaliana
gi|12324899|gb|AAG52401.1|AC020579_3 putative ribosomal
protein; 23489-24540 [Arabidopsis thaliana]
gi|13878115|gb|AAK44135.1|AF370320_1 putative ribosomal
protein [Arabidopsis thaliana]
gi|17104787|gb|AAL34282.1| putative ribosomal protein
[Arabidopsis thaliana] gi|21554085|gb|AAM63166.1|
putative ribosomal protein [Arabidopsis thaliana]
Length = 112
Score = 149 bits (376), Expect = 3e-35
Identities = 67/106 (63%), Positives = 88/106 (82%)
Frame = +2
Query: 38 GENVRLFVKGHILGYKRSKANQQNHTALLKVDGVATKKEVAWYLGKRIAYIYKAKNEKQG 217
GE VRL+V+G ILGYKRSK+NQ +T+L++++GV T++EV WY GKR+AYIYKAK +K G
Sbjct: 7 GERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNG 66
Query: 218 TKFRCIWGRVMRAHGNVGVVKAKFSSNLPPISLGGAVRVMLYPSRV 355
+ +RCIWG+V R HGN GVV+AKF+SNLPP S+G VRV +YPS +
Sbjct: 67 SHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
>ref|NP_174951.1| 60S ribosomal protein L35a (RPL35aB) [Arabidopsis thaliana]
gi|25295567|pir||D96492 probable ribosomal protein
[imported] - Arabidopsis thaliana
gi|9802763|gb|AAF99832.1|AC008046_4 Putative ribosomal
protein [Arabidopsis thaliana]
gi|13899109|gb|AAK48976.1|AF370549_1 Putative ribosomal
protein [Arabidopsis thaliana]
gi|21536737|gb|AAM61069.1| ribosomal protein
[Arabidopsis thaliana] gi|30102814|gb|AAP21325.1|
At1g41880 [Arabidopsis thaliana]
Length = 111
Score = 148 bits (374), Expect = 5e-35
Identities = 65/106 (61%), Positives = 88/106 (82%)
Frame = +2
Query: 38 GENVRLFVKGHILGYKRSKANQQNHTALLKVDGVATKKEVAWYLGKRIAYIYKAKNEKQG 217
GE VRL+V+G +LGYKRSK+NQ +T+L++++GV T++EV WY GKR+AYIYKAK +K G
Sbjct: 6 GERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNG 65
Query: 218 TKFRCIWGRVMRAHGNVGVVKAKFSSNLPPISLGGAVRVMLYPSRV 355
+ +RCIWG+V R HGN GVV++KF+SNLPP S+G VRV +YPS +
Sbjct: 66 SHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
>ref|NP_191134.1| 60S ribosomal protein L35a (RPL35aD) [Arabidopsis thaliana]
gi|27735243|sp|P51422|R35A_ARATH 60S ribosomal protein
L35a gi|11276881|pir||T47714 ribosomal protein L35a,
cytosolic [similarity] - Arabidopsis thaliana
gi|7263563|emb|CAB81600.1| ribosomal protein
[Arabidopsis thaliana] gi|15450625|gb|AAK96584.1|
AT3g55750/F1I16_160 [Arabidopsis thaliana]
gi|17386164|gb|AAL38628.1|AF446895_1 AT3g55750/F1I16_160
[Arabidopsis thaliana] gi|21593235|gb|AAM65184.1|
ribosomal protein L35a-like [Arabidopsis thaliana]
Length = 111
Score = 148 bits (373), Expect = 6e-35
Identities = 65/106 (61%), Positives = 88/106 (82%)
Frame = +2
Query: 38 GENVRLFVKGHILGYKRSKANQQNHTALLKVDGVATKKEVAWYLGKRIAYIYKAKNEKQG 217
GE VRL+V+G +LGYKRSK+NQ +T+L++++GV T++EV WY GKR+AYIYKAK +K G
Sbjct: 6 GERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNG 65
Query: 218 TKFRCIWGRVMRAHGNVGVVKAKFSSNLPPISLGGAVRVMLYPSRV 355
+ +RCIWG+V R HGN GVV++KF+SNLPP S+G VRV +YPS +
Sbjct: 66 SHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
