Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000044A_C02 KCC000044A_c02
(1048 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_226843.2| similar to Ribonuclease III (RNase III) (p241) ... 51 4e-05
dbj|BAC37260.1| unnamed protein product [Mus musculus] gi|263472... 49 1e-04
ref|XP_129193.1| similar to human MGC2574 protein [Mus musculus]... 48 3e-04
dbj|BAA95108.1| unnamed protein product [Mus musculus] 48 3e-04
ref|XP_341606.1| similar to KIAA1311 protein [Rattus norvegicus] 47 4e-04
>ref|XP_226843.2| similar to Ribonuclease III (RNase III) (p241) [Rattus norvegicus]
Length = 1484
Score = 50.8 bits (120), Expect = 4e-05
Identities = 39/140 (27%), Positives = 50/140 (34%), Gaps = 10/140 (7%)
Frame = +1
Query: 58 PPASAYRPRLLEFVTRQQ----------QWPSSCARRCWPAQLPPPAWRPAVLTPALALP 207
P A YRP+ L + QQ PSS PP P +A
Sbjct: 20 PSAPTYRPQNLRLLHPQQPPAQYQYEPPSAPSSSFSNSQAPNFMPPRPDFVPYPPPVAPS 79
Query: 208 RRLPAPPSTGQSPGPWHPLRQRLPRSGACPSYSSLLPCPSTATRSS*SSLTRLVPGSAPP 387
+ P PP + P P H +R P P +PCP+ S P PP
Sbjct: 80 AQGPLPPCPVRPPYPNHQMRHPFPVPPCFPPMPPPMPCPNNPPVSGAPPGQGTFPFMVPP 139
Query: 388 RSWPLPPPPPPRSKCSRHQW 447
S P PPPPP + +Q+
Sbjct: 140 PSMPHPPPPPVMPQQVNYQY 159
>dbj|BAC37260.1| unnamed protein product [Mus musculus] gi|26347267|dbj|BAC37282.1|
unnamed protein product [Mus musculus]
Length = 426
Score = 48.9 bits (115), Expect = 1e-04
Identities = 42/127 (33%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Frame = +1
Query: 55 VPPASAYRPRLLEFVTRQQQWPSSCARRCWPAQLPPPAWRPAVLTPALALPRRLPAP-PS 231
VP S + L++F + ++ + R P LP P +P + P LP+P P
Sbjct: 24 VPEVSRAKRALVDFKSNSEETGELKSTRVPPLSLPSPGPQPETSPGSPCPPLSLPSPGPQ 83
Query: 232 TGQSPG-PWHPLRQRLPRSGACPSYSSLLPCPSTATRSS*SSLTRLVPGS-APPRSWPLP 405
SPG P+ PL LP G P S PCP + S PGS PP S P P
Sbjct: 84 PETSPGSPFPPL--SLPSPGPQPETSPGSPCPPLSLPSP-GPQPETSPGSPCPPLSLPSP 140
Query: 406 PPPPPRS 426
P P S
Sbjct: 141 GPQPEAS 147
Score = 41.6 bits (96), Expect = 0.023
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = +1
Query: 121 SSCARRCWPAQLPPPAWRPAVLTPALALPRRLPAPPSTGQSPGP------WHPLRQRLPR 282
S C P+ P P P P L+LP P P ++ SPGP P RQ P
Sbjct: 110 SPCPPLSLPSPGPQPETSPGSPCPPLSLPSPGPQPEASPGSPGPRQDADDGSPQRQPEPH 169
Query: 283 SGACPSYSSL-LPCPSTATRSS*SSLTRLVPGSAPP 387
G+ + L L P+ T SS S R P PP
Sbjct: 170 PGSLQPHQDLGLESPAGQTESSPESPQREQPSKLPP 205
>ref|XP_129193.1| similar to human MGC2574 protein [Mus musculus]
gi|26353800|dbj|BAC40530.1| unnamed protein product [Mus
musculus] gi|28175353|gb|AAH43326.1| 6720480F16Rik
protein [Mus musculus]
Length = 426
Score = 47.8 bits (112), Expect = 3e-04
Identities = 42/127 (33%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
Frame = +1
Query: 55 VPPASAYRPRLLEFVTRQQQWPSSCARRCWPAQLPPPAWRPAVLTPALALPRRLPAP-PS 231
VP S + L++F + ++ + R P LP P +P + P LP+P P
Sbjct: 24 VPEVSRAKRALVDFKSNSEETGELKSTRVPPLSLPSPGPQPETSPGSPCPPLSLPSPGPQ 83
Query: 232 TGQSPG-PWHPLRQRLPRSGACPSYSSLLPCPSTATRSS*SSLTRLVPGS-APPRSWPLP 405
SPG P PL LP G P S PCP + S PGS PP S P P
Sbjct: 84 PETSPGSPCPPL--SLPSPGPQPETSPGSPCPPLSLPSP-GPQPETSPGSPCPPLSLPSP 140
Query: 406 PPPPPRS 426
P P S
Sbjct: 141 GPQPEAS 147
Score = 41.6 bits (96), Expect = 0.023
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = +1
Query: 121 SSCARRCWPAQLPPPAWRPAVLTPALALPRRLPAPPSTGQSPGP------WHPLRQRLPR 282
S C P+ P P P P L+LP P P ++ SPGP P RQ P
Sbjct: 110 SPCPPLSLPSPGPQPETSPGSPCPPLSLPSPGPQPEASPGSPGPRQDADDGSPQRQPEPH 169
Query: 283 SGACPSYSSL-LPCPSTATRSS*SSLTRLVPGSAPP 387
G+ + L L P+ T SS S R P PP
Sbjct: 170 PGSLQPHQDLGLESPAGQTESSPESPQREQPSKLPP 205
Score = 37.4 bits (85), Expect = 0.43
Identities = 36/113 (31%), Positives = 41/113 (35%), Gaps = 5/113 (4%)
Frame = +1
Query: 121 SSCARRCWPAQLPPPAWRPAVLTPALALPRRLPAPPSTGQSPGPWHPLRQRLPRSGACPS 300
S C P+ P P P P L+LP P P ++ SP P PL LP G P
Sbjct: 70 SPCPPLSLPSPGPQPETSPGSPCPPLSLPSPGPQPETSPGSPCP--PL--SLPSPGPQPE 125
Query: 301 YSSLLPCPSTATRSS*SSLTRLVPGSAPPR-----SWPLPPPPPPRSKCSRHQ 444
S PCP + S PGS PR P P P HQ
Sbjct: 126 TSPGSPCPPLSLPSP-GPQPEASPGSPGPRQDADDGSPQRQPEPHPGSLQPHQ 177
>dbj|BAA95108.1| unnamed protein product [Mus musculus]
Length = 426
Score = 47.8 bits (112), Expect = 3e-04
Identities = 42/127 (33%), Positives = 53/127 (41%), Gaps = 3/127 (2%)
Frame = +1
Query: 55 VPPASAYRPRLLEFVTRQQQWPSSCARRCWPAQLPPPAWRPAVLTPALALPRRLPAP-PS 231
VP S + L++F + ++ + R P LP P +P + P LP+P P
Sbjct: 24 VPEVSRAKRALVDFKSNSEETGELKSTRVPPLSLPSPGPQPETSPGSPCPPLSLPSPGPQ 83
Query: 232 TGQSPG-PWHPLRQRLPRSGACPSYSSLLPCPSTATRSS*SSLTRLVPGS-APPRSWPLP 405
SPG P PL LP G P S PCP + S PGS PP S P P
Sbjct: 84 PETSPGSPCPPL--SLPSPGPQPETSPGSPCPPLSLPSP-GPQPETSPGSPCPPLSLPSP 140
Query: 406 PPPPPRS 426
P P S
Sbjct: 141 GPQPEAS 147
Score = 41.6 bits (96), Expect = 0.023
Identities = 32/96 (33%), Positives = 39/96 (40%), Gaps = 7/96 (7%)
Frame = +1
Query: 121 SSCARRCWPAQLPPPAWRPAVLTPALALPRRLPAPPSTGQSPGP------WHPLRQRLPR 282
S C P+ P P P P L+LP P P ++ SPGP P RQ P
Sbjct: 110 SPCPPLSLPSPGPQPETSPGSPCPPLSLPSPGPQPEASPGSPGPRQDADDGSPQRQPEPH 169
Query: 283 SGACPSYSSL-LPCPSTATRSS*SSLTRLVPGSAPP 387
G+ + L L P+ T SS S R P PP
Sbjct: 170 PGSLQPHQDLGLESPAGQTESSPESPQREQPSKLPP 205
Score = 37.4 bits (85), Expect = 0.43
Identities = 36/113 (31%), Positives = 41/113 (35%), Gaps = 5/113 (4%)
Frame = +1
Query: 121 SSCARRCWPAQLPPPAWRPAVLTPALALPRRLPAPPSTGQSPGPWHPLRQRLPRSGACPS 300
S C P+ P P P P L+LP P P ++ SP P PL LP G P
Sbjct: 70 SPCPPLSLPSPGPQPETSPGSPCPPLSLPSPGPQPETSPGSPCP--PL--SLPSPGPQPE 125
Query: 301 YSSLLPCPSTATRSS*SSLTRLVPGSAPPR-----SWPLPPPPPPRSKCSRHQ 444
S PCP + S PGS PR P P P HQ
Sbjct: 126 TSPGSPCPPLSLPSP-GPQPEASPGSPGPRQDADDGSPQRQPEPHPGSLQPHQ 177
>ref|XP_341606.1| similar to KIAA1311 protein [Rattus norvegicus]
Length = 1060
Score = 47.4 bits (111), Expect = 4e-04
Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 8/99 (8%)
Frame = +1
Query: 145 PAQLPPPAWRPAVLTPALALPRRLPAP---PSTGQSPGPWHPLRQRLPRSGACPSYSSLL 315
P LPPP P +L P + P P P P G PGP H +R +P+ P S +L
Sbjct: 320 PPGLPPPP-PPGMLMPPMPGPGPGPGPGPGPGPGPGPGPGHSMRLPVPQGHGQPPPSVVL 378
Query: 316 PCPSTATRSS*SSLTRLVPG-SAPPRSWP----LPPPPP 417
P P S +R PG SA P P LPPP P
Sbjct: 379 PIPRPPISQSSLINSRDQPGTSAVPNLAPVGARLPPPLP 417
