Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000043A_C01 KCC000043A_c01
(1009 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00073139.1| COG0264: Translation elongation factor Ts [Tr... 139 1e-36
ref|NP_897184.1| putative elongation factor EF-Ts [Synechococcus... 131 2e-34
ref|NP_894416.1| putative Elongation factor Ts, EF-Ts [Prochloro... 131 4e-34
ref|NP_682477.1| elongation factor TS [Thermosynechococcus elong... 127 5e-34
ref|NP_924775.1| elongation factor TS [Gloeobacter violaceus] gi... 130 5e-34
>ref|ZP_00073139.1| COG0264: Translation elongation factor Ts [Trichodesmium erythraeum
IMS101]
Length = 219
Score = 139 bits (350), Expect(2) = 1e-36
Identities = 69/127 (54%), Positives = 90/127 (70%)
Frame = -2
Query: 936 ELVNYIAMGIVAGQNVQYVSADEIPAEVFEREKQLEMARDDLKGKPDAIRAKIAEGRAKK 757
ELV +AM I A V+YVS D+IP E E EK +EM R+DL KP+ IR KI +GR K
Sbjct: 93 ELVKNVAMQIAACPQVEYVSVDDIPTEFVESEKSIEMGREDLSNKPENIREKIVQGRIGK 152
Query: 756 IATEMCLLDQPFLTDPSKTVAEAIKESIAAIGEKISVRRFVKFQLGEGLEKKSNDFAAEV 577
E+ L+DQP++ D +KT+ E IKE+ A +GEK+ VRRF++F LGEGLEK+ ++FA EV
Sbjct: 153 RLKELTLMDQPYIRDQNKTIEELIKETSAQLGEKVQVRRFIRFVLGEGLEKQESNFAEEV 212
Query: 576 AAATGAK 556
AA TG K
Sbjct: 213 AAQTGKK 219
Score = 37.0 bits (84), Expect(2) = 1e-36
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -3
Query: 1007 GSRLGVLLEVNCETDFVAASE 945
G R+GVL+EVNC+TDFVA +E
Sbjct: 69 GGRIGVLVEVNCQTDFVARNE 89
>ref|NP_897184.1| putative elongation factor EF-Ts [Synechococcus sp. WH 8102]
gi|33632795|emb|CAE07606.1| putative elongation factor
EF-Ts [Synechococcus sp. WH 8102]
Length = 219
Score = 131 bits (329), Expect(2) = 2e-34
Identities = 63/126 (50%), Positives = 88/126 (69%)
Frame = -2
Query: 936 ELVNYIAMGIVAGQNVQYVSADEIPAEVFEREKQLEMARDDLKGKPDAIRAKIAEGRAKK 757
EL+ ++M + A NV+YVS D+IP E+ EREK +EM RDDL GKP+ ++ KI EGR K
Sbjct: 93 ELLRDVSMQVAACPNVEYVSTDDIPDEIREREKAIEMGRDDLDGKPEQMKVKIVEGRIGK 152
Query: 756 IATEMCLLDQPFLTDPSKTVAEAIKESIAAIGEKISVRRFVKFQLGEGLEKKSNDFAAEV 577
E+ L++QPF+ D S TV E +K++ IGE + VRRF ++ LGEG+E + +DFAAEV
Sbjct: 153 RLKELALMEQPFIKDSSITVTELVKQTAGKIGENVQVRRFTRYTLGEGIEVEESDFAAEV 212
Query: 576 AAATGA 559
A+ A
Sbjct: 213 ASMKAA 218
Score = 37.7 bits (86), Expect(2) = 2e-34
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -3
Query: 1007 GSRLGVLLEVNCETDFVAASE 945
GSR+GVL+E+NCETDFVA +
Sbjct: 69 GSRVGVLIEINCETDFVARGD 89
>ref|NP_894416.1| putative Elongation factor Ts, EF-Ts [Prochlorococcus marinus str.
MIT 9313] gi|33634772|emb|CAE20758.1| putative
Elongation factor Ts, EF-Ts [Prochlorococcus marinus
str. MIT 9313]
Length = 218
Score = 131 bits (330), Expect(2) = 4e-34
Identities = 65/121 (53%), Positives = 84/121 (68%)
Frame = -2
Query: 933 LVNYIAMGIVAGQNVQYVSADEIPAEVFEREKQLEMARDDLKGKPDAIRAKIAEGRAKKI 754
L+ +AM + A NV+YVS +EIP +V E+EK +EM RDDL GKP+ I+AKI EGR K
Sbjct: 94 LLKDVAMQVAACPNVEYVSTEEIPVDVVEKEKSIEMGRDDLSGKPEQIKAKIVEGRIGKR 153
Query: 753 ATEMCLLDQPFLTDPSKTVAEAIKESIAAIGEKISVRRFVKFQLGEGLEKKSNDFAAEVA 574
E+ LL+QPF+ D S TVAE +K+ IGE I VRRF ++ LGEG+E DFA EVA
Sbjct: 154 LKELVLLEQPFIRDSSMTVAELVKQVAGKIGENIKVRRFTRYTLGEGIEVDQTDFATEVA 213
Query: 573 A 571
+
Sbjct: 214 S 214
Score = 36.6 bits (83), Expect(2) = 4e-34
Identities = 15/21 (71%), Positives = 19/21 (90%)
Frame = -3
Query: 1007 GSRLGVLLEVNCETDFVAASE 945
G+R+GVLLE+NCETDFVA +
Sbjct: 69 GARVGVLLELNCETDFVARGD 89
>ref|NP_682477.1| elongation factor TS [Thermosynechococcus elongatus BP-1]
gi|22295412|dbj|BAC09239.1| elongation factor TS
[Thermosynechococcus elongatus BP-1]
Length = 297
Score = 127 bits (320), Expect(2) = 5e-34
Identities = 68/135 (50%), Positives = 88/135 (64%)
Frame = -2
Query: 933 LVNYIAMGIVAGQNVQYVSADEIPAEVFEREKQLEMARDDLKGKPDAIRAKIAEGRAKKI 754
LV IA I A NV++VS D+IPAE E+E+Q+ + D LKGKP ++ KI G+ +K
Sbjct: 94 LVQDIAKQIAACPNVEFVSLDDIPAEYKEKERQIALGSDALKGKPPEVQEKIVAGKLEKT 153
Query: 753 ATEMCLLDQPFLTDPSKTVAEAIKESIAAIGEKISVRRFVKFQLGEGLEKKSNDFAAEVA 574
E+CLL QPF+ D SKTV E +KE IA +GE I +RRF +F LGEG+EK+ + A EVA
Sbjct: 154 LKELCLLYQPFIRDQSKTVEELVKEHIAELGENIRIRRFQRFVLGEGIEKQETNLAEEVA 213
Query: 573 AATGAK*LPAAAAGA 529
A T A A A A
Sbjct: 214 AQTQAMRAAAQTAAA 228
Score = 40.0 bits (92), Expect(2) = 5e-34
Identities = 17/22 (77%), Positives = 20/22 (90%)
Frame = -3
Query: 1007 GSRLGVLLEVNCETDFVAASEK 942
G R+GVL+EVNCETDFVA +EK
Sbjct: 69 GGRIGVLVEVNCETDFVARNEK 90
>ref|NP_924775.1| elongation factor TS [Gloeobacter violaceus]
gi|35212395|dbj|BAC89770.1| elongation factor TS
[Gloeobacter violaceus]
Length = 219
Score = 130 bits (328), Expect(2) = 5e-34
Identities = 68/129 (52%), Positives = 89/129 (68%)
Frame = -2
Query: 945 EVNELVNYIAMGIVAGQNVQYVSADEIPAEVFEREKQLEMARDDLKGKPDAIRAKIAEGR 766
E +LV IAM I A NV++VS D++ EV +RE +E+ R+DL KP+ IRA+IA+GR
Sbjct: 90 EFQQLVRDIAMQIAASPNVEFVSVDDVDQEVKDRELAIEVQREDLLSKPEKIRAQIAQGR 149
Query: 765 AKKIATEMCLLDQPFLTDPSKTVAEAIKESIAAIGEKISVRRFVKFQLGEGLEKKSNDFA 586
K+ E LL+QPF+ D S +V E I + IA IGE I VRRF +F LGEGLEK+ +FA
Sbjct: 150 VDKLFKERALLEQPFIKDQSISVGELITQKIAKIGENIKVRRFARFVLGEGLEKEEKNFA 209
Query: 585 AEVAAATGA 559
EVAA TG+
Sbjct: 210 EEVAAQTGS 218
Score = 37.0 bits (84), Expect(2) = 5e-34
Identities = 15/22 (68%), Positives = 19/22 (86%)
Frame = -3
Query: 1007 GSRLGVLLEVNCETDFVAASEK 942
G R+GVL+EVNC+TDFVA E+
Sbjct: 69 GGRIGVLVEVNCQTDFVAKGEE 90
