Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000025A_C02 KCC000025A_c02
(1109 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB92932.1| 40S ribosomal protein S23 [Oryza sativa (japonic... 268 2e-70
sp|P46297|RS23_FRAAN 40S RIBOSOMAL PROTEIN S23 (S12) gi|1362041|... 264 2e-69
gb|AAF26742.1|AF220539_1 40s ribosomal protein S23 [Euphorbia es... 262 7e-69
ref|NP_195916.1| 40S ribosomal protein S23 (RPS23B) [Arabidopsis... 259 6e-68
ref|NP_566351.1| 40S ribosomal protein S23 (RPS23A) [Arabidopsis... 250 3e-65
>dbj|BAB92932.1| 40S ribosomal protein S23 [Oryza sativa (japonica cultivar-group)]
gi|20805267|dbj|BAB92933.1| 40S ribosomal protein S23
[Oryza sativa (japonica cultivar-group)]
gi|21671347|dbj|BAC02683.1| 40S ribosomal protein [Oryza
sativa (japonica cultivar-group)]
gi|21671348|dbj|BAC02684.1| 40S ribosomal protein [Oryza
sativa (japonica cultivar-group)]
gi|28876025|gb|AAO60034.1| 40S ribosomal protein S23
[Oryza sativa (japonica cultivar-group)]
gi|29124115|gb|AAO65856.1| 40S ribosomal protein S23
[Oryza sativa (japonica cultivar-group)]
Length = 142
Score = 268 bits (684), Expect = 2e-70
Identities = 130/142 (91%), Positives = 136/142 (95%)
Frame = +2
Query: 554 MGKTRGMGAGRKLRVHRREERWADKDYNKSHLGSEWKKPFAGASHAKGIVLEKIGIEAKQ 733
MGKTRGMGAGRKL+ HRR +RWADK Y KSHLG+EWKKPFAG+SHAKGIVLEKIGIEAKQ
Sbjct: 1 MGKTRGMGAGRKLKTHRRNQRWADKAYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60
Query: 734 PNSAIRKCARVQLIKNGKKIAAFVPMDGCLNFIEENDEVLIAGFGRRGHAVGDIPGVRFK 913
PNSAIRKCARVQL+KNGKKIAAFVP DGCLNFIEENDEVLIAGFGR+GHAVGDIPGVRFK
Sbjct: 61 PNSAIRKCARVQLVKNGKKIAAFVPNDGCLNFIEENDEVLIAGFGRKGHAVGDIPGVRFK 120
Query: 914 VVKVSGVSLLALFKGKKEKPRS 979
VVKVSGVSLLALFK KKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142
>sp|P46297|RS23_FRAAN 40S RIBOSOMAL PROTEIN S23 (S12) gi|1362041|pir||S56673 ribosomal
protein S23.e, cytosolic (clone RJ3) - garden strawberry
gi|643074|gb|AAA79921.1| putative 40S ribosomal protein
s12
Length = 142
Score = 264 bits (675), Expect = 2e-69
Identities = 129/142 (90%), Positives = 135/142 (94%)
Frame = +2
Query: 554 MGKTRGMGAGRKLRVHRREERWADKDYNKSHLGSEWKKPFAGASHAKGIVLEKIGIEAKQ 733
MGKTRGMGA RKL+ HRR +RWADK Y KSHLG+EWKKPFAG+SHAKGIVLEKIGIEAKQ
Sbjct: 1 MGKTRGMGAARKLKNHRRRQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60
Query: 734 PNSAIRKCARVQLIKNGKKIAAFVPMDGCLNFIEENDEVLIAGFGRRGHAVGDIPGVRFK 913
PNSAIRKCARVQLIKNGKKIAAFVP DGCLN+IEENDEVLIAGFGR+GHAVGDIPGVRFK
Sbjct: 61 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120
Query: 914 VVKVSGVSLLALFKGKKEKPRS 979
VVKVSGVSLLALFK KKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142
>gb|AAF26742.1|AF220539_1 40s ribosomal protein S23 [Euphorbia esula]
Length = 142
Score = 262 bits (670), Expect = 7e-69
Identities = 128/142 (90%), Positives = 134/142 (94%)
Frame = +2
Query: 554 MGKTRGMGAGRKLRVHRREERWADKDYNKSHLGSEWKKPFAGASHAKGIVLEKIGIEAKQ 733
MGKT GMGA RKL+ HRR +RWADK Y KSHLG+EWKKPFAG+SHAKGIVLEKIGIEAKQ
Sbjct: 1 MGKTHGMGAARKLKSHRRTQRWADKSYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60
Query: 734 PNSAIRKCARVQLIKNGKKIAAFVPMDGCLNFIEENDEVLIAGFGRRGHAVGDIPGVRFK 913
PNSAIRKCARVQLIKNGKKIAAFVP DGCLN+IEENDEVLIAGFGR+GHAVGDIPGVRFK
Sbjct: 61 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120
Query: 914 VVKVSGVSLLALFKGKKEKPRS 979
VVKVSGVSLLALFK KKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142
>ref|NP_195916.1| 40S ribosomal protein S23 (RPS23B) [Arabidopsis thaliana]
gi|27735238|sp|P49201|R23B_ARATH 40S ribosomal protein
S23-2 (S12) gi|11276598|pir||T48317 hypothetical protein
F9G14.270 - Arabidopsis thaliana
gi|7413571|emb|CAB86050.1| putative protein [Arabidopsis
thaliana] gi|14532718|gb|AAK64160.1| unknown protein
[Arabidopsis thaliana] gi|15450459|gb|AAK96523.1|
AT5g02960/F9G14_270 [Arabidopsis thaliana]
gi|21281137|gb|AAM44979.1| unknown protein [Arabidopsis
thaliana]
Length = 142
Score = 259 bits (662), Expect = 6e-68
Identities = 128/142 (90%), Positives = 134/142 (94%)
Frame = +2
Query: 554 MGKTRGMGAGRKLRVHRREERWADKDYNKSHLGSEWKKPFAGASHAKGIVLEKIGIEAKQ 733
MGKTRGMGAGRKL+ R +RWADK Y KSHLG+EWKKPFAG+SHAKGIVLEKIGIEAKQ
Sbjct: 1 MGKTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWKKPFAGSSHAKGIVLEKIGIEAKQ 60
Query: 734 PNSAIRKCARVQLIKNGKKIAAFVPMDGCLNFIEENDEVLIAGFGRRGHAVGDIPGVRFK 913
PNSAIRKCARVQLIKNGKKIAAFVP DGCLN+IEENDEVLIAGFGR+GHAVGDIPGVRFK
Sbjct: 61 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120
Query: 914 VVKVSGVSLLALFKGKKEKPRS 979
VVKVSGVSLLALFK KKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142
>ref|NP_566351.1| 40S ribosomal protein S23 (RPS23A) [Arabidopsis thaliana]
gi|27734450|sp|Q9SF35|R23A_ARATH 40S ribosomal protein
S23-1 (S12) gi|21536723|gb|AAM61055.1| putative 40S
ribosomal protein S23 [Arabidopsis thaliana]
Length = 142
Score = 250 bits (639), Expect = 3e-65
Identities = 125/142 (88%), Positives = 132/142 (92%)
Frame = +2
Query: 554 MGKTRGMGAGRKLRVHRREERWADKDYNKSHLGSEWKKPFAGASHAKGIVLEKIGIEAKQ 733
MGKTRGMGAGRKL+ R +RWADK Y KS+ G+EWKKPFA +SHAKGIVLEKIGIEAKQ
Sbjct: 1 MGKTRGMGAGRKLKQLRITQRWADKHYKKSNRGNEWKKPFACSSHAKGIVLEKIGIEAKQ 60
Query: 734 PNSAIRKCARVQLIKNGKKIAAFVPMDGCLNFIEENDEVLIAGFGRRGHAVGDIPGVRFK 913
PNSAIRKCARVQLIKNGKKIAAFVP DGCLN+IEENDEVLIAGFGR+GHAVGDIPGVRFK
Sbjct: 61 PNSAIRKCARVQLIKNGKKIAAFVPNDGCLNYIEENDEVLIAGFGRKGHAVGDIPGVRFK 120
Query: 914 VVKVSGVSLLALFKGKKEKPRS 979
VVKVSGVSLLALFK KKEKPRS
Sbjct: 121 VVKVSGVSLLALFKEKKEKPRS 142
