Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000023A_C01 KCC000023A_c01
(623 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P47903|RS27_CHLRE 40S ribosomal protein S27 gi|1076217|pir||S... 172 4e-42
emb|CAD40354.1| OSJNBa0020I02.1 [Oryza sativa (japonica cultivar... 163 2e-39
ref|NP_191670.1| 40S ribosomal protein S27 (RPS27B) [Arabidopsis... 160 1e-38
ref|NP_182095.1| 40S ribosomal protein S27 (RPS27A) [Arabidopsis... 160 2e-38
emb|CAA59732.2| putative zinc finger protein [Hordeum vulgare su... 160 2e-38
>sp|P47903|RS27_CHLRE 40S ribosomal protein S27 gi|1076217|pir||S51146 ribosomal protein
S27.e, cytosolic - Chlamydomonas reinhardtii
gi|624959|emb|CAA58669.1| ribosomal protein S27
[Chlamydomonas reinhardtii] gi|1587085|prf||2205351B
ribosomal protein S27
Length = 86
Score = 172 bits (436), Expect = 4e-42
Identities = 83/86 (96%), Positives = 83/86 (96%)
Frame = +3
Query: 27 MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGS 206
MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGS
Sbjct: 1 MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGS 60
Query: 207 CSSVLCTPTGGRARLTEGCSFRRKSD 284
CSSVLCTPTG RLTEGCSFRRKSD
Sbjct: 61 CSSVLCTPTGWPRRLTEGCSFRRKSD 86
>emb|CAD40354.1| OSJNBa0020I02.1 [Oryza sativa (japonica cultivar-group)]
Length = 86
Score = 163 bits (412), Expect = 2e-39
Identities = 76/86 (88%), Positives = 81/86 (93%)
Frame = +3
Query: 27 MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGS 206
MVLS+DIDLLNPPAELEK KHK+KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+C
Sbjct: 1 MVLSNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPG 60
Query: 207 CSSVLCTPTGGRARLTEGCSFRRKSD 284
C +VLC PTGG+ARLTEGCSFRRKSD
Sbjct: 61 CQTVLCQPTGGKARLTEGCSFRRKSD 86
>ref|NP_191670.1| 40S ribosomal protein S27 (RPS27B) [Arabidopsis thaliana]
gi|11276658|pir||T50532 ribosomal protein S27 -
Arabidopsis thaliana gi|4193382|gb|AAD10029.1| ribosomal
protein S27 [Arabidopsis thaliana]
gi|4193384|gb|AAD10030.1| ribosomal protein S27
[Arabidopsis thaliana] gi|8388627|emb|CAB94147.1|
ribosomal protein S27 [Arabidopsis thaliana]
gi|15724226|gb|AAL06506.1|AF412053_1
AT3g61110/T27I15_200 [Arabidopsis thaliana]
gi|19699108|gb|AAL90920.1| AT3g61110/T27I15_200
[Arabidopsis thaliana]
Length = 86
Score = 160 bits (405), Expect = 1e-38
Identities = 73/86 (84%), Positives = 80/86 (92%)
Frame = +3
Query: 27 MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGS 206
MVL +DIDLLNPPAELEK KHK KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CG+
Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGN 60
Query: 207 CSSVLCTPTGGRARLTEGCSFRRKSD 284
C ++LC PTGG+A+LTEGCSFRRK D
Sbjct: 61 CQTILCQPTGGKAKLTEGCSFRRKGD 86
>ref|NP_182095.1| 40S ribosomal protein S27 (RPS27A) [Arabidopsis thaliana]
gi|7440568|pir||T02476 40S ribosomal protein S27
[imported] - Arabidopsis thaliana
gi|3386624|gb|AAC28554.1| putative ribosomal protein S27
[Arabidopsis thaliana] gi|18252883|gb|AAL62368.1|
putative ribosomal protein S27 [Arabidopsis thaliana]
gi|20197050|gb|AAM14895.1| putative ribosomal protein
S27 [Arabidopsis thaliana] gi|21553959|gb|AAM63040.1|
putative ribosomal protein S27 [Arabidopsis thaliana]
gi|23197762|gb|AAN15408.1| putative ribosomal protein
S27 [Arabidopsis thaliana]
Length = 84
Score = 160 bits (404), Expect = 2e-38
Identities = 73/84 (86%), Positives = 80/84 (94%)
Frame = +3
Query: 27 MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGS 206
MVL +DIDLLNPPAELEK KHK KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCG+
Sbjct: 1 MVLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGN 60
Query: 207 CSSVLCTPTGGRARLTEGCSFRRK 278
C ++LCTPTGG+A+LTEGCSFR+K
Sbjct: 61 CQTLLCTPTGGKAKLTEGCSFRKK 84
>emb|CAA59732.2| putative zinc finger protein [Hordeum vulgare subsp. vulgare]
gi|14495006|emb|CAC42134.1| putative ribosomal protein
S27 [Hordeum vulgare subsp. vulgare]
gi|14495008|emb|CAC42162.1| putative ribosomal protein
S27 [Hordeum vulgare subsp. vulgare]
gi|14495010|emb|CAC42163.1| putative ribosomal protein
S27 [Hordeum vulgare subsp. vulgare]
Length = 86
Score = 160 bits (404), Expect = 2e-38
Identities = 74/86 (86%), Positives = 79/86 (91%)
Frame = +3
Query: 27 MVLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGS 206
MVL +DIDLLNPPAELEK KHK+KRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+C
Sbjct: 1 MVLQNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPG 60
Query: 207 CSSVLCTPTGGRARLTEGCSFRRKSD 284
C +VLC PTGG+ARLTEGCSFRRK D
Sbjct: 61 CQTVLCQPTGGKARLTEGCSFRRKGD 86
