2008

1. Suppression of carotenoid synthesis in transgenic Arabidopsis cultured cells over-expressing the AHL29/SOB3 gene.
   Sano R, Suzuki H, Ogawa Y, Dansako T, Sakurai N, Okazaki K, Aoki K, Saito K, Shibata D. (2008)
   Plant Biotechenol. 25(6): 573-7.


2. Over-expression of transcription associated factor genes co-expressed with genes of the mevalonate pathway, upstream of isoprenoid biosynthesis, in Arabidopsis cultured cells.
   Sano R, Ogata Y, Suzuki H, Ogawa Y, Dansako T, Sakurai N, Okazaki K, Aoki K, Saito K, Shibata D. (2008)
   Plant Biotechenol. 25(6): 583-7.


3. Cryopreservation and metabolic profiling analysis of Arabidopsis T87 suspension-cultured cells.
   Ogawa Y, Suzuki H, Sakurai N, Aoki K, SaitoK, Shibata D. (2008)
   Cryo Letters. 29(5): 427-36.


4. Metabolic profiling of flavonoids in Lotus japonicus using liquid chromatography Fourier transform ion cyclotron resonance mass spectrometry.
   Suzuki H, Sasaki R, Ogata Y, Nakamura Y, Sakurai N, Kitajima M, Takayama H, Kanaya S, Aoki K, Shibata D, Saito K. (2008)
   Phytochemistry. 69(1): 99-111.


5. Efficient and high-throughput vector construction and Agrobacterium-mediated transformation of Arabidopsis thaliana suspension-cultured cells for functional genomics.
   Ogawa Y, Dansako T, Yano K, Sakurai N, Suzuki H, Aoki K, Noji M, Saito K, Shibata D. (2008)
   Plant Cell Physiol. 49(2): 242-50.


6. Metabolite annotations based on the integration of mass spectral information.
   Iijima Y, Nakamura Y, Ogata Y, Tanaka K, Sakurai N, Suda K, Suzuki T, Suzuki H, Okazaki K, Kanaya S, Aoki K, Shibata D. (2008)
   Plant J. 54(5): 949-62.


7. A tool for high-throughput prediction of molecular formulas and identification of isotopic peaks from large-scale mass spectrometry data.
   Nakamura Y, Kanaya S, Sakurai N, Iijima Y, Aoki K, Okazaki K, Suzuki H, Kitayama M, Shibata D. (2008)
   Plant Biotechnol. 25(4): 377-80.


8. Characterization of orphan monooxygenases by rapid substrate screening using FT-ICR mass spectrometry.
   Furuya T, Nishi T, Shibata D, Suzuki H, Ohta D, Kino K. (2008)
   Chem Biol. 15(6): 563-72.


9. At5g54160 gene encodes Arabidopsis thaliana 5-hydroxyconiferaldehyde O-methyltransferase.
   Nakatsubo T, Kitamura Y, Sakakibara N, Mizutani M, Hattori T, Sakurai N, Shibata D, Suzuki S, Umezawa T. (2008)
   The Japan Wood Research Society. 54(4): 312-7.


10. Dikaryotic cell division of the fission yeast Schizosaccharomyces pombe.
    Okazaki K, Niwa N. (2008)
    Biosci Biotechnol Biochem. 72(6): 1531-8.


11. Inter-subspecies hybrid dikaryons of oyster mushroom independently isolated in Vietnam and Japan.
    Truong BN, Okazaki K, Le KT, Suzuki A. (2008)
    Biosci Biotechnol Biochem. 72(1): 216-8.


12. Tree Biotechnology of Tropical Acacia.
    Umezawa T, Suzuki S, Shibata D. (2008)
    Plant Biotechenol. 25(3): 309-13.


13. Metabolite profiling of chalcones and flavanones in tomato fruit.
    Iijima Y, Suda K, Suzuki T, Aoki K, Shibata D. (2008)
    J Japan Soc Hortic Sci. 77(1): 94-102.


14. PCR detection of type I polyketide synthase genes in myxobacteria.
    Komaki H, Fudou R, Iizuka T, Nakajima D, Okazaki K, Shibata D, Ojika M, Harayama S. (2008)
    Appl Environ Microbiol. 74(17): 5571-4.


15. Screening for gamma-aminobutyric acid (GABA)-rich tomato varieties.
    Saito T, Matsukura C, Sugiyama M, Watahiki A, Ohshima I, Iijima Y, Konishi C, Fujii T, Inai S, Fukuda N, Nishimura S, Ezura H. (2008)
    J Japan Soc Hortic Sci. 77(3): 242-50.


16. Biochemical mechanism on GABA accumulation during fruit development in tomato.
    Akihiro T, Koike S, Tani R, Tominaga T, Watanabe S, Iijima Y, Aoki K, Shibata D, Ashihara H, Matsukura C, Akama K, Fujimura T, Ezura H. (2008)
    Plant Cell Physiol. 49(9): 1378-89.


17. Comprehensive resources for tomato functional genomics based on the miniature model tomato Micro-Tom.
    Matsukura C, Aoki K, Fukuda N, Mizoguchi T, Asamizu E, Saito T, Shibata D, Ezura H. (2008)
    Curr Genomics. 9(7): 436-43.


18. The AtGenExpress hormone and chemical treatment data set: experimental design, data evaluation, model data analysis and data access.
    Goda H, Sasaki E, Akiyama K, Maruyama-Nakashita A, Nakabayashi K, Li W, Ogawa M, Yamauchi Y, Preston J, Aoki K, Kiba T, Takatsuto S, Fujioka S, Asami T, Nakano T, Kato H, Mizuno T, Sakakibara H, Yamaguchi S, Nambara E, Kamiya Y, Takahashi H, Yokota-Hirai M, Sakurai T, Shinozaki K, Saito K, Yoshida S, Shimada Y. (2008)
    Plant J. 55(3): 526-42.