>AJ011527\AJ011527\108..1127\1020\CAA09677.1\Bovine immunodeficiency virus\Bovine immunodeficiency virus transmembrane gene./gene="transmembrane protein"/codon_start=1/product="transmembrane protein"/protein_id="CAA09677.1"/db_xref="GI:3702384"/db_xref="GOA:O92375"/db_xref="InterPro:IPR008411"/db_xref="UniProtKB/TrEMBL:O92375"\/db_xref="taxon:417296" 1 2 2 0 8 7 10 10 5 5 6 8 2 1 0 9 6 1 8 4 4 6 2 6 4 1 3 2 2 7 7 1 4 3 2 3 8 5 7 6 11 9 11 10 5 2 14 14 14 2 3 7 3 2 10 7 8 5 8 2 14 0 1 0 >AY953094\AY953094\1..711\711\AAX51686.1\Bovine immunodeficiency virus\Bovine immunodeficiency virus tat-rev protein mRNA, complete cds./codon_start=1/product="tat-rev protein"/protein_id="AAX51686.1"/db_xref="GI:61676079"\/db_xref="taxon:417296" 4 5 3 0 7 8 3 3 3 8 1 5 4 2 2 5 3 1 4 0 2 3 6 9 2 6 3 2 0 4 20 3 3 2 0 0 2 4 7 6 3 2 6 7 2 3 8 3 8 2 0 2 2 8 2 4 4 3 1 4 7 1 0 0 >BIMPEVPP#1\L04972\191..3352\3162\AAA42767.1\Bovine immunodeficiency virus R29\Bovine immunodeficiency virus R29 pol protein (pol), vif protein(vif), and envelope glycoprotein (env) genes, complete cds; andunknown genes./gene="pol"/codon_start=1/product="pol protein"/protein_id="AAA42767.1"/db_xref="GI:210721"\/db_xref="taxon:417296" 2 1 2 3 30 18 26 11 8 12 23 13 12 4 1 8 7 6 27 19 3 16 33 19 3 17 19 18 2 11 38 4 24 4 34 9 13 11 50 37 12 25 27 27 10 14 58 24 13 36 12 18 8 13 17 17 38 20 20 17 29 0 0 1 >BIMPEVPP#2\L04972\3211..3807\597\AAA42768.1\Bovine immunodeficiency virus R29\Bovine immunodeficiency virus R29 pol protein (pol), vif protein(vif), and envelope glycoprotein (env) genes, complete cds; andunknown genes./gene="vif"/codon_start=1/product="vif protein"/protein_id="AAA42768.1"/db_xref="GI:210722"\/db_xref="taxon:417296" 1 4 2 0 10 3 3 4 3 7 4 3 3 3 1 1 4 4 5 8 2 2 4 6 5 1 2 0 4 3 5 3 3 1 1 1 3 2 4 1 4 2 5 3 4 2 6 2 3 1 5 2 2 5 3 4 3 3 2 4 7 1 0 0 >BIMPEVPP#3\L04972\3339..3503\165\AAA42769.1\Bovine immunodeficiency virus R29\Bovine immunodeficiency virus R29 pol protein (pol), vif protein(vif), and envelope glycoprotein (env) genes, complete cds; andunknown genes./codon_start=1/product="unknown"/protein_id="AAA42769.1"/db_xref="GI:210723"\/db_xref="taxon:417296" 0 2 0 2 3 2 0 0 2 0 1 0 0 1 0 2 1 2 1 0 0 0 1 1 0 0 1 0 0 0 1 0 0 0 1 0 1 2 1 3 2 0 0 1 2 1 2 1 4 2 1 2 0 0 0 0 1 0 2 1 1 0 0 1 >BIMPEVPP#4\L04972\3699..3941\243\AAA42770.1\Bovine immunodeficiency virus R29\Bovine immunodeficiency virus R29 pol protein (pol), vif protein(vif), and envelope glycoprotein (env) genes, complete cds; andunknown genes./codon_start=1/product="unknown"/protein_id="AAA42770.1"/db_xref="GI:210724"\/db_xref="taxon:417296" 1 0 1 2 2 3 1 0 3 2 0 3 0 0 0 1 0 0 2 3 1 2 2 3 0 0 0 4 0 1 1 1 0 1 1 1 2 4 2 1 2 3 4 0 3 2 2 1 0 2 0 1 0 0 1 1 0 0 1 1 5 0 1 0 >BIMPEVPP#5\L04972\4025..6652\2628\AAA42771.1\Bovine immunodeficiency virus R29\Bovine immunodeficiency virus R29 pol protein (pol), vif protein(vif), and envelope glycoprotein (env) genes, complete cds; andunknown genes./gene="env"/codon_start=1/product="envelope glycoprotein"/protein_id="AAA42771.1"/db_xref="GI:210725"\/db_xref="taxon:417296" 3 6 2 2 16 9 18 17 20 14 18 16 10 16 5 9 17 17 21 11 8 9 16 5 5 10 14 13 3 13 30 6 13 9 16 15 17 6 22 15 21 30 17 26 11 7 27 21 26 18 5 19 7 9 14 17 27 19 14 14 34 0 1 0 >BIMTATPP\L04973\404..715\312\AAA42775.1\Bovine immunodeficiency virus R29\Bovine immunodeficiency virus R29 tat protein (tat) mRNA, completecds./gene="tat"/function="transactivation of viral gene expression"/experiment="experimental evidence, no additional details recorded"/codon_start=1/product="tat protein"/protein_id="AAA42775.1"/db_xref="GI:210732"\/db_xref="taxon:417296" 2 1 2 0 3 5 1 0 0 1 0 2 2 0 0 0 3 1 1 0 2 1 3 3 1 4 1 0 0 2 10 1 1 0 0 0 1 0 3 2 3 1 2 4 0 2 2 1 2 2 0 1 2 6 1 3 2 2 1 3 4 1 0 0 >BIMGVPP#1\L04974\314..1744\1431\AAA42763.1\Bovine immunodeficiency virus R29\Bovine immunodeficiency virus R29 gag protein (gag) and vif protein(vif) genes, complete cds; and unknown genes./gene="gag"/codon_start=1/product="gag protein"/protein_id="AAA42763.1"/db_xref="GI:210715"\/db_xref="taxon:417296" 0 0 0 1 15 7 6 5 5 9 10 5 9 4 2 8 2 5 15 7 1 9 12 6 1 9 14 14 2 7 8 3 9 6 7 2 9 2 20 20 9 13 17 15 4 9 25 13 7 9 6 6 6 7 2 6 8 10 10 11 7 0 1 0 >BIMGVPP#2\L04974\4599..5195\597\AAA42764.1\Bovine immunodeficiency virus R29\Bovine immunodeficiency virus R29 gag protein (gag) and vif protein(vif) genes, complete cds; and unknown genes./gene="vif"/codon_start=1/product="vif protein"/protein_id="AAA42764.1"/db_xref="GI:210716"\/db_xref="taxon:417296" 1 4 2 0 10 3 3 4 3 7 4 3 3 3 1 1 4 4 5 7 2 4 4 5 5 1 2 1 4 3 5 3 3 1 1 2 3 1 5 1 4 2 5 3 4 2 5 2 2 2 5 2 2 5 3 4 3 3 1 4 7 1 0 0 >BIMGVPP#3\L04974\4727..4891\165\AAA42765.1\Bovine immunodeficiency virus R29\Bovine immunodeficiency virus R29 gag protein (gag) and vif protein(vif) genes, complete cds; and unknown genes./codon_start=1/product="unknown"/protein_id="AAA42765.1"/db_xref="GI:210717"\/db_xref="taxon:417296" 0 2 0 2 2 2 0 0 2 0 1 0 0 1 0 1 1 2 1 0 0 0 1 1 0 1 1 0 0 0 1 0 0 0 1 0 1 2 2 3 2 0 0 1 2 1 2 1 4 2 2 1 0 0 0 0 1 0 2 1 1 0 0 1 >BIMGVPP#4\L04974\5087..5329\243\AAA42766.1\Bovine immunodeficiency virus R29\Bovine immunodeficiency virus R29 gag protein (gag) and vif protein(vif) genes, complete cds; and unknown genes./codon_start=1/product="unknown"/protein_id="AAA42766.1"/db_xref="GI:210718"\/db_xref="taxon:417296" 1 0 1 2 2 3 1 0 3 2 0 3 0 0 0 1 0 0 2 3 1 2 2 3 0 0 0 4 0 1 1 1 0 1 1 1 2 4 1 1 2 2 4 0 2 3 3 1 0 3 0 1 0 0 1 1 0 0 1 1 5 0 1 0 >BIMREVA\L06504\307..867\561\AAA42774.1\Bovine immunodeficiency virus R29\Bovine immunodeficiency virus R29 rev protein (rev) mRNA, completecds./gene="rev"/codon_start=1/product="rev protein"/protein_id="AAA42774.1"/db_xref="GI:210730"\/db_xref="taxon:417296" 2 6 1 0 7 7 3 2 5 7 2 3 2 3 2 5 0 0 6 0 0 2 3 6 1 6 2 3 1 3 11 2 4 2 0 0 1 5 5 6 3 2 6 5 2 1 11 2 8 3 0 2 0 2 1 1 2 3 0 2 4 1 0 0 >BIM127#1\M32690\316..1746\1431\AAA91270.1\Bovine immunodeficiency virus\Bovine immunodeficiency-like virus, complete proviral genome./gene="gag"/codon_start=1/product="gag polyprotein"/protein_id="AAA91270.1"/db_xref="GI:210707"\/db_xref="taxon:417296" 0 0 0 1 15 9 6 4 5 9 10 5 9 4 2 8 2 5 14 7 2 8 12 7 1 9 14 14 2 8 6 3 11 6 7 2 9 3 19 19 9 14 14 18 4 9 23 14 7 9 6 6 6 7 2 6 8 10 9 11 7 0 1 0 >BIM127#2\M32690\1572..4742\3171\AAA91271.1\Bovine immunodeficiency virus\Bovine immunodeficiency-like virus, complete proviral genome./gene="pol"/codon_start=1/product="reverse transcriptase"/protein_id="AAA91271.1"/db_xref="GI:210708"\/db_xref="taxon:417296" 2 1 2 3 31 17 26 11 8 12 23 13 12 4 1 8 7 6 28 20 3 17 34 19 2 17 20 18 2 10 39 3 24 4 34 10 14 12 49 39 12 25 27 27 10 14 58 24 13 36 12 18 8 13 17 17 37 18 19 17 29 0 0 1 >BIM127#3\M32690\4601..5197\597\AAA91272.1\Bovine immunodeficiency virus\Bovine immunodeficiency-like virus, complete proviral genome./codon_start=1/protein_id="AAA91272.1"/db_xref="GI:210709"\/db_xref="taxon:417296" 1 4 2 0 10 3 3 4 3 7 4 3 3 3 1 1 4 4 5 8 2 4 4 5 5 1 2 0 4 3 5 3 3 1 1 2 3 1 4 1 4 2 5 3 4 2 6 2 2 2 5 2 2 5 3 4 3 3 1 4 7 1 0 0 >BIM127#4\M32690\5228..5539\312\AAA91273.1\Bovine immunodeficiency virus\Bovine immunodeficiency-like virus, complete proviral genome./codon_start=1/protein_id="AAA91273.1"/db_xref="GI:210710"\/db_xref="taxon:417296" 2 1 3 0 3 4 1 0 0 2 0 2 2 0 0 0 3 1 1 0 2 1 3 3 0 3 0 0 1 2 11 1 1 0 0 0 1 0 3 2 3 1 2 4 0 2 1 1 2 2 0 1 2 6 1 3 2 2 1 4 4 1 0 0 >BIM127#5\M32690\5415..8129\2715\AAA91274.1\Bovine immunodeficiency virus\Bovine immunodeficiency-like virus, complete proviral genome./gene="env"/codon_start=1/product="envelope polyprotein"/protein_id="AAA91274.1"/db_xref="GI:210711"\/db_xref="taxon:417296" 3 6 2 2 15 11 18 17 22 14 18 19 10 17 5 9 19 15 23 13 6 9 15 5 7 11 14 13 4 14 30 7 14 11 16 15 16 6 21 14 21 30 18 25 9 8 30 21 28 17 5 20 8 9 16 17 29 19 17 16 35 0 1 0 >BIMREV#1\M74712\309..869\561\AAA42772.1\Bovine immunodeficiency virus\Bovine immunodeficiency-like virus Rev protein 1 (rev1) and Revprotein 2 (rev2) mRNA, complete cds./gene="rev1"/codon_start=1/product="Rev protein 1"/protein_id="AAA42772.1"/db_xref="GI:210727"\/db_xref="taxon:417296" 5 1 5 1 6 8 1 2 3 1 0 0 4 8 1 5 6 0 6 3 6 3 3 4 1 3 1 2 1 6 10 1 5 2 1 2 1 0 5 3 6 1 2 5 0 2 3 4 2 3 0 0 1 3 4 3 1 4 3 2 1 6 2 3 >BIMREV#2\M74712\448..927\480\AAA42773.1\Bovine immunodeficiency virus\Bovine immunodeficiency-like virus Rev protein 1 (rev1) and Revprotein 2 (rev2) mRNA, complete cds./gene="rev2"/codon_start=1/product="Rev protein 2"/protein_id="AAA42773.1"/db_xref="GI:210728"\/db_xref="taxon:417296" 2 4 1 0 7 5 2 2 3 6 1 3 2 2 2 4 0 0 4 0 0 2 3 7 1 5 2 2 0 2 9 2 2 2 0 0 1 5 5 5 1 1 5 3 2 1 4 1 6 1 0 1 0 2 1 1 2 1 0 1 3 1 0 0