Pan troglodytes troglodytes [gbpri]: 28 CDS's (2743 codons)
AmAcid  Codon      Number    /1000     Fraction   ..
 
Gly     GGG        29.00     10.57      0.00
Gly     GGA        42.00     15.31      0.00
Gly     GGT        40.00     14.58      0.00
Gly     GGC        34.00     12.40      0.00
 
Glu     GAG        54.00     19.69      0.00
Glu     GAA        80.00     29.17      0.00
Asp     GAT        40.00     14.58      0.00
Asp     GAC        35.00     12.76      0.00
 
Val     GTG        55.00     20.05      0.00
Val     GTA        26.00      9.48      0.00
Val     GTT        35.00     12.76      0.00
Val     GTC        33.00     12.03      0.00
 
Ala     GCG         9.00      3.28      0.00
Ala     GCA        33.00     12.03      0.00
Ala     GCT        38.00     13.85      0.00
Ala     GCC        46.00     16.77      0.00
 
Arg     AGG        37.00     13.49      0.00
Arg     AGA        64.00     23.33      0.00
Ser     AGT        25.00      9.11      0.00
Ser     AGC        38.00     13.85      0.00
 
Lys     AAG        87.00     31.72      0.00
Lys     AAA       116.00     42.29      0.00
Asn     AAT        63.00     22.97      0.00
Asn     AAC        42.00     15.31      0.00
 
Met     ATG        78.00     28.44      0.00
Ile     ATA        38.00     13.85      0.00
Ile     ATT        59.00     21.51      0.00
Ile     ATC        47.00     17.13      0.00
 
Thr     ACG        12.00      4.37      0.00
Thr     ACA        65.00     23.70      0.00
Thr     ACT        58.00     21.14      0.00
Thr     ACC        45.00     16.41      0.00
 
Trp     TGG        48.00     17.50      0.00
End     TGA        12.00      4.37      0.00
Cys     TGT        70.00     25.52      0.00
Cys     TGC       108.00     39.37      0.00
 
End     TAG         5.00      1.82      0.00
End     TAA        11.00      4.01      0.00
Tyr     TAT        45.00     16.41      0.00
Tyr     TAC        39.00     14.22      0.00
 
Leu     TTG        43.00     15.68      0.00
Leu     TTA        25.00      9.11      0.00
Phe     TTT        70.00     25.52      0.00
Phe     TTC        46.00     16.77      0.00
 
Ser     TCG         8.00      2.92      0.00
Ser     TCA        37.00     13.49      0.00
Ser     TCT        37.00     13.49      0.00
Ser     TCC        30.00     10.94      0.00
 
Arg     CGG        13.00      4.74      0.00
Arg     CGA        18.00      6.56      0.00
Arg     CGT        14.00      5.10      0.00
Arg     CGC        11.00      4.01      0.00
 
Gln     CAG        53.00     19.32      0.00
Gln     CAA        50.00     18.23      0.00
His     CAT        32.00     11.67      0.00
His     CAC        19.00      6.93      0.00
 
Leu     CTG        83.00     30.26      0.00
Leu     CTA        25.00      9.11      0.00
Leu     CTT        68.00     24.79      0.00
Leu     CTC        59.00     21.51      0.00
 
Pro     CCG         7.00      2.55      0.00
Pro     CCA        81.00     29.53      0.00
Pro     CCT        43.00     15.68      0.00
Pro     CCC        30.00     10.94      0.00


Coding GC 44.96% 1st letter GC 45.02% 2nd letter GC 43.09% 3rd letter GC 46.77%
Genetic code 1: Standard
Format:
Genetic codes (NCBI)
Codon Usage Table with Amino Acids
A style like CodonFrequency output in GCG Wisconsin PackageTM

CDS Search:

Keyword example: ribosomal protein / MAP kinase
List of codon usage for each CDS (format)
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