Paracoccus denitrificans PD1222 [gbbct]: 5106 CDS's (1593906 codons)
fields: [triplet] [amino acid] [fraction] [frequency: per thousand] ([number])
UUU F 0.19  6.6 ( 10514)  UCU S 0.03  1.3 (  2057)  UAU Y 0.62 12.5 ( 19912)  UGU C 0.09  0.8 (  1308)
UUC F 0.81 27.9 ( 44541)  UCC S 0.19  9.0 ( 14302)  UAC Y 0.38  7.7 ( 12254)  UGC C 0.91  8.0 ( 12731)
UUA L 0.00  0.2 (   360)  UCA S 0.02  1.2 (  1835)  UAA * 0.10  0.3 (   520)  UGA * 0.75  2.4 (  3833)
UUG L 0.07  7.2 ( 11444)  UCG S 0.44 21.1 ( 33573)  UAG * 0.15  0.5 (   753)  UGG W 1.00 14.7 ( 23504)

CUU L 0.10 10.4 ( 16576)  CCU P 0.05  2.6 (  4160)  CAU H 0.59 12.3 ( 19582)  CGU R 0.06  4.6 (  7385)
CUC L 0.11 11.0 ( 17583)  CCC P 0.39 21.7 ( 34525)  CAC H 0.41  8.6 ( 13718)  CGC R 0.57 44.6 ( 71017)
CUA L 0.01  0.8 (  1317)  CCA P 0.03  1.9 (  2972)  CAA Q 0.17  5.5 (  8751)  CGA R 0.03  2.4 (  3787)
CUG L 0.72 74.6 (118934)  CCG P 0.53 29.8 ( 47424)  CAG Q 0.83 26.7 ( 42548)  CGG R 0.28 22.0 ( 35000)

AUU I 0.07  3.3 (  5269)  ACU T 0.02  1.2 (  1947)  AAU N 0.25  5.7 (  9006)  AGU S 0.03  1.3 (  2012)
AUC I 0.91 45.7 ( 72853)  ACC T 0.62 30.5 ( 48672)  AAC N 0.75 17.1 ( 27225)  AGC S 0.30 14.6 ( 23299)
AUA I 0.02  1.0 (  1541)  ACA T 0.04  1.8 (  2848)  AAA K 0.18  4.4 (  7083)  AGA R 0.01  0.9 (  1403)
AUG M 1.00 26.7 ( 42506)  ACG T 0.32 15.7 ( 25000)  AAG K 0.82 20.2 ( 32219)  AGG R 0.04  3.5 (  5518)

GUU V 0.05  3.7 (  5975)  GCU A 0.03  4.3 (  6849)  GAU D 0.32 18.1 ( 28800)  GGU G 0.07  6.2 (  9844)
GUC V 0.47 33.2 ( 52970)  GCC A 0.51 67.1 (106912)  GAC D 0.68 38.1 ( 60804)  GGC G 0.68 61.5 ( 98076)
GUA V 0.02  1.1 (  1726)  GCA A 0.06  7.9 ( 12534)  GAA E 0.33 18.5 ( 29458)  GGA G 0.05  4.6 (  7258)
GUG V 0.46 32.1 ( 51215)  GCG A 0.40 52.9 ( 84343)  GAG E 0.67 38.4 ( 61156)  GGG G 0.20 18.1 ( 28865)

Coding GC 67.18% 1st letter GC 68.51% 2nd letter GC 47.98% 3rd letter GC 85.04%
Genetic code 1: Standard
Format:
Genetic codes (NCBI)
Codon Usage Table with Amino Acids
A style like CodonFrequency output in GCG Wisconsin PackageTM

CDS Search:

Keyword example: ribosomal protein / MAP kinase
List of codon usage for each CDS [CAUTION: The file is big (> 1000 entries).] (format)
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