Paracoccus denitrificans PD1222 [gbbct]: 5106 CDS's (1593906 codons)
fields: [triplet] [amino acid] [fraction] [frequency: per thousand] ([number])
UUU F 0.19 6.6 ( 10514) UCU S 0.03 1.3 ( 2057) UAU Y 0.62 12.5 ( 19912) UGU C 0.09 0.8 ( 1308)
UUC F 0.81 27.9 ( 44541) UCC S 0.19 9.0 ( 14302) UAC Y 0.38 7.7 ( 12254) UGC C 0.91 8.0 ( 12731)
UUA L 0.00 0.2 ( 360) UCA S 0.02 1.2 ( 1835) UAA * 0.10 0.3 ( 520) UGA * 0.75 2.4 ( 3833)
UUG L 0.07 7.2 ( 11444) UCG S 0.44 21.1 ( 33573) UAG * 0.15 0.5 ( 753) UGG W 1.00 14.7 ( 23504)
CUU L 0.10 10.4 ( 16576) CCU P 0.05 2.6 ( 4160) CAU H 0.59 12.3 ( 19582) CGU R 0.06 4.6 ( 7385)
CUC L 0.11 11.0 ( 17583) CCC P 0.39 21.7 ( 34525) CAC H 0.41 8.6 ( 13718) CGC R 0.57 44.6 ( 71017)
CUA L 0.01 0.8 ( 1317) CCA P 0.03 1.9 ( 2972) CAA Q 0.17 5.5 ( 8751) CGA R 0.03 2.4 ( 3787)
CUG L 0.72 74.6 (118934) CCG P 0.53 29.8 ( 47424) CAG Q 0.83 26.7 ( 42548) CGG R 0.28 22.0 ( 35000)
AUU I 0.07 3.3 ( 5269) ACU T 0.02 1.2 ( 1947) AAU N 0.25 5.7 ( 9006) AGU S 0.03 1.3 ( 2012)
AUC I 0.91 45.7 ( 72853) ACC T 0.62 30.5 ( 48672) AAC N 0.75 17.1 ( 27225) AGC S 0.30 14.6 ( 23299)
AUA I 0.02 1.0 ( 1541) ACA T 0.04 1.8 ( 2848) AAA K 0.18 4.4 ( 7083) AGA R 0.01 0.9 ( 1403)
AUG M 1.00 26.7 ( 42506) ACG T 0.32 15.7 ( 25000) AAG K 0.82 20.2 ( 32219) AGG R 0.04 3.5 ( 5518)
GUU V 0.05 3.7 ( 5975) GCU A 0.03 4.3 ( 6849) GAU D 0.32 18.1 ( 28800) GGU G 0.07 6.2 ( 9844)
GUC V 0.47 33.2 ( 52970) GCC A 0.51 67.1 (106912) GAC D 0.68 38.1 ( 60804) GGC G 0.68 61.5 ( 98076)
GUA V 0.02 1.1 ( 1726) GCA A 0.06 7.9 ( 12534) GAA E 0.33 18.5 ( 29458) GGA G 0.05 4.6 ( 7258)
GUG V 0.46 32.1 ( 51215) GCG A 0.40 52.9 ( 84343) GAG E 0.67 38.4 ( 61156) GGG G 0.20 18.1 ( 28865)
Coding GC 67.18%
1st letter GC 68.51%
2nd letter GC 47.98%
3rd letter GC 85.04%
Genetic code 1: Standard
List of codon usage for each CDS
[CAUTION: The file is big (> 1000 entries).]
(format)
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