Escherichia coli O157:H7 EDL933 [gbbct]: 5347 CDS's (1611503 codons)
fields: [triplet] [amino acid] [fraction] [frequency: per thousand] ([number])
UUU F 0.58 22.2 ( 35846) UCU S 0.14 8.7 ( 14013) UAU Y 0.57 16.5 ( 26648) UGU C 0.45 5.2 ( 8458)
UUC F 0.42 15.9 ( 25565) UCC S 0.15 8.9 ( 14420) UAC Y 0.43 12.3 ( 19766) UGC C 0.55 6.4 ( 10285)
UUA L 0.13 13.8 ( 22316) UCA S 0.14 8.1 ( 13117) UAA * 0.59 2.0 ( 3163) UGA * 0.33 1.1 ( 1751)
UUG L 0.13 13.0 ( 20904) UCG S 0.15 8.8 ( 14220) UAG * 0.08 0.3 ( 435) UGG W 1.00 15.3 ( 24656)
CUU L 0.11 11.4 ( 18366) CCU P 0.17 7.2 ( 11657) CAU H 0.58 12.8 ( 20631) CGU R 0.36 20.2 ( 32590)
CUC L 0.10 10.5 ( 16869) CCC P 0.13 5.6 ( 8961) CAC H 0.42 9.4 ( 15116) CGC R 0.37 20.8 ( 33547)
CUA L 0.04 3.9 ( 6257) CCA P 0.19 8.4 ( 13507) CAA Q 0.33 14.7 ( 23703) CGA R 0.07 3.8 ( 6166)
CUG L 0.49 51.1 ( 82300) CCG P 0.51 22.4 ( 36178) CAG Q 0.67 29.4 ( 47324) CGG R 0.11 6.2 ( 9955)
AUU I 0.50 29.7 ( 47838) ACU T 0.17 9.1 ( 14639) AAU N 0.47 19.2 ( 30864) AGU S 0.16 9.4 ( 15123)
AUC I 0.40 23.9 ( 38504) ACC T 0.41 22.8 ( 36724) AAC N 0.53 21.7 ( 34907) AGC S 0.27 16.0 ( 25800)
AUA I 0.09 5.5 ( 8835) ACA T 0.15 8.1 ( 13030) AAA K 0.76 34.0 ( 54723) AGA R 0.05 2.9 ( 4656)
AUG M 1.00 27.2 ( 43846) ACG T 0.27 15.0 ( 24122) AAG K 0.24 11.0 ( 17729) AGG R 0.03 1.8 ( 2915)
GUU V 0.26 18.1 ( 29200) GCU A 0.16 15.4 ( 24855) GAU D 0.63 32.8 ( 52914) GGU G 0.33 24.2 ( 38983)
GUC V 0.21 14.8 ( 23870) GCC A 0.27 25.2 ( 40571) GAC D 0.37 19.2 ( 30953) GGC G 0.39 28.1 ( 45226)
GUA V 0.16 10.9 ( 17561) GCA A 0.22 20.7 ( 33343) GAA E 0.68 39.3 ( 63339) GGA G 0.12 8.9 ( 14286)
GUG V 0.37 26.2 ( 42261) GCG A 0.35 32.3 ( 52091) GAG E 0.32 18.7 ( 30158) GGG G 0.16 11.8 ( 18947)
Coding GC 51.50%
1st letter GC 58.44%
2nd letter GC 40.88%
3rd letter GC 55.17%
Genetic code 1: Standard
List of codon usage for each CDS
[CAUTION: The file is big (> 1000 entries).]
(format)
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