Tomato yellow ring virus [gbvrl]: 8 CDS's (2706 codons)
fields: [triplet] [frequency: per thousand] ([number])
UUU F 0.46 29.2 ( 79) UCU S 0.31 24.4 ( 66) UAU Y 0.66 21.1 ( 57) UGU C 0.36 5.2 ( 14)
UUC F 0.54 33.6 ( 91) UCC S 0.16 12.2 ( 33) UAC Y 0.34 10.7 ( 29) UGC C 0.64 9.2 ( 25)
UUA L 0.17 12.6 ( 34) UCA S 0.23 18.1 ( 49) UAA * 1.00 1.8 ( 5) UGA W 0.18 1.1 ( 3)
UUG L 0.24 18.1 ( 49) UCG S 0.02 1.5 ( 4) UAG * 0.00 0.0 ( 0) UGG W 0.82 5.2 ( 14)
CUU L 0.24 17.7 ( 48) CCU P 0.42 15.5 ( 42) CAU H 0.66 7.0 ( 19) CGU R 0.31 1.5 ( 4)
CUC L 0.10 7.4 ( 20) CCC P 0.13 4.8 ( 13) CAC H 0.34 3.7 ( 10) CGC R 0.00 0.0 ( 0)
CUA L 0.09 7.0 ( 19) CCA P 0.38 14.0 ( 38) CAA Q 0.57 15.9 ( 43) CGA R 0.54 2.6 ( 7)
CUG L 0.16 11.8 ( 32) CCG P 0.06 2.2 ( 6) CAG Q 0.43 12.2 ( 33) CGG R 0.15 0.7 ( 2)
AUU I 0.76 34.7 ( 94) ACU T 0.51 32.9 ( 89) AAU N 0.52 28.8 ( 78) AGU S 0.10 8.1 ( 22)
AUC I 0.24 11.1 ( 30) ACC T 0.13 8.1 ( 22) AAC N 0.48 26.6 ( 72) AGC S 0.17 13.3 ( 36)
AUA M 0.40 21.8 ( 59) ACA T 0.33 21.4 ( 58) AAA K 0.73 67.6 ( 183) AGA G 0.18 15.9 ( 43)
AUG M 0.60 32.5 ( 88) ACG T 0.03 1.8 ( 5) AAG K 0.27 25.1 ( 68) AGG G 0.14 12.2 ( 33)
GUU V 0.41 22.9 ( 62) GCU A 0.47 38.1 ( 103) GAU D 0.70 31.8 ( 86) GGU G 0.24 21.4 ( 58)
GUC V 0.13 7.4 ( 20) GCC A 0.11 8.5 ( 23) GAC D 0.30 13.3 ( 36) GGC G 0.11 10.0 ( 27)
GUA V 0.17 9.6 ( 26) GCA A 0.39 31.4 ( 85) GAA E 0.61 41.4 ( 112) GGA G 0.17 14.8 ( 40)
GUG V 0.29 16.6 ( 45) GCG A 0.03 2.6 ( 7) GAG E 0.39 26.2 ( 71) GGG G 0.16 13.7 ( 37)
Coding GC 38.96%
1st letter GC 43.39%
2nd letter GC 37.25%
3rd letter GC 36.25%
Genetic code 13: Ascidian Mitochondrial
List of codon usage for each CDS
(format)
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