Sugarcane streak Egypt virus - [Naga] [gbvrl]: 3 CDS's (631 codons)
fields: [triplet] [frequency: per thousand] ([number])
UUU F 0.27 11.1 ( 7) UCU S 0.21 17.4 ( 11) UAU Y 0.29 9.5 ( 6) UGU C 0.45 7.9 ( 5)
UUC F 0.73 30.1 ( 19) UCC S 0.31 25.4 ( 16) UAC Y 0.71 23.8 ( 15) UGC C 0.45 7.9 ( 5)
UUA L 0.09 6.3 ( 4) UCA S 0.17 14.3 ( 9) UAA * 0.00 0.0 ( 0) UGA C 0.09 1.6 ( 1)
UUG L 0.24 17.4 ( 11) UCG S 0.06 4.8 ( 3) UAG * 1.00 3.2 ( 2) UGG W 1.00 23.8 ( 15)
CUU L 0.15 11.1 ( 7) CCU P 0.40 30.1 ( 19) CAU H 0.69 17.4 ( 11) CGU R 0.18 9.5 ( 6)
CUC L 0.24 17.4 ( 11) CCC P 0.15 11.1 ( 7) CAC H 0.31 7.9 ( 5) CGC R 0.15 7.9 ( 5)
CUA L 0.04 3.2 ( 2) CCA P 0.17 12.7 ( 8) CAA Q 0.41 14.3 ( 9) CGA R 0.03 1.6 ( 1)
CUG L 0.24 17.4 ( 11) CCG P 0.29 22.2 ( 14) CAG Q 0.59 20.6 ( 13) CGG R 0.18 9.5 ( 6)
AUU I 0.33 14.3 ( 9) ACU T 0.25 19.0 ( 12) AAU N 0.42 12.7 ( 8) AGU S 0.13 11.1 ( 7)
AUC I 0.48 20.6 ( 13) ACC T 0.29 22.2 ( 14) AAC N 0.58 17.4 ( 11) AGC S 0.12 9.5 ( 6)
AUA I 0.19 7.9 ( 5) ACA T 0.21 15.8 ( 10) AAA K 0.24 12.7 ( 8) AGA R 0.15 7.9 ( 5)
AUG M 1.00 12.7 ( 8) ACG T 0.25 19.0 ( 12) AAG K 0.76 39.6 ( 25) AGG R 0.30 15.8 ( 10)
GUU V 0.28 20.6 ( 13) GCU A 0.31 26.9 ( 17) GAU D 0.52 19.0 ( 12) GGU G 0.32 22.2 ( 14)
GUC V 0.19 14.3 ( 9) GCC A 0.39 33.3 ( 21) GAC D 0.48 17.4 ( 11) GGC G 0.30 20.6 ( 13)
GUA V 0.13 9.5 ( 6) GCA A 0.19 15.8 ( 10) GAA E 0.44 25.4 ( 16) GGA G 0.23 15.8 ( 10)
GUG V 0.40 30.1 ( 19) GCG A 0.11 9.5 ( 6) GAG E 0.56 31.7 ( 20) GGG G 0.16 11.1 ( 7)
Coding GC 53.20%
1st letter GC 53.72%
2nd letter GC 48.34%
3rd letter GC 57.53%
Genetic code 10: Alternative Ciliate Macronuclear
List of codon usage for each CDS
(format)
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