Oryza sativa [gbpln]: 92188 CDS's (34132283 codons)
AmAcid  Codon      Number    /1000     Fraction   ..
 
Gly     GGG    583357.00     17.09      0.00
Gly     GGA    542264.00     15.89      0.00
Gly     GGT    505609.00     14.81      0.00
Gly     GGC   1005701.00     29.46      0.00
 
Glu     GAG   1315826.00     38.55      0.00
Glu     GAA    738891.00     21.65      0.00
Asp     GAT    863983.00     25.31      0.00
Asp     GAC    959498.00     28.11      0.00
 
Val     GTG    828681.00     24.28      0.00
Val     GTA    231761.00      6.79      0.00
Val     GTT    529509.00     15.51      0.00
Val     GTC    685971.00     20.10      0.00
 
Ala     GCG    908634.00     26.62      0.00
Ala     GCA    591267.00     17.32      0.00
Ala     GCT    667854.00     19.57      0.00
Ala     GCC   1050723.00     30.78      0.00
 
Arg     AGG    544515.00     15.95      0.00
Arg     AGA    358226.00     10.50      0.00
Ser     AGT    300879.00      8.82      0.00
Ser     AGC    545529.00     15.98      0.00
 
Lys     AAG   1101342.00     32.27      0.00
Lys     AAA    544476.00     15.95      0.00
Asn     AAT    515761.00     15.11      0.00
Asn     AAC    633017.00     18.55      0.00
 
Met     ATG    812432.00     23.80      0.00
Ile     ATA    300085.00      8.79      0.00
Ile     ATT    483941.00     14.18      0.00
Ile     ATC    662207.00     19.40      0.00
 
Thr     ACG    388036.00     11.37      0.00
Thr     ACA    394803.00     11.57      0.00
Thr     ACT    363451.00     10.65      0.00
Thr     ACC    508156.00     14.89      0.00
 
Trp     TGG    472543.00     13.84      0.00
End     TGA     41361.00      1.21      0.00
Cys     TGT    211609.00      6.20      0.00
Cys     TGC    422851.00     12.39      0.00
 
End     TAG     28508.00      0.84      0.00
End     TAA     22360.00      0.66      0.00
Tyr     TAT    339638.00      9.95      0.00
Tyr     TAC    517042.00     15.15      0.00
 
Leu     TTG    500913.00     14.68      0.00
Leu     TTA    209911.00      6.15      0.00
Phe     TTT    446063.00     13.07      0.00
Phe     TTC    763386.00     22.37      0.00
 
Ser     TCG    420825.00     12.33      0.00
Ser     TCA    424426.00     12.43      0.00
Ser     TCT    433684.00     12.71      0.00
Ser     TCC    557258.00     16.33      0.00
 
Arg     CGG    458602.00     13.44      0.00
Arg     CGA    219662.00      6.44      0.00
Arg     CGT    244821.00      7.17      0.00
Arg     CGC    550575.00     16.13      0.00
 
Gln     CAG    709469.00     20.79      0.00
Gln     CAA    460234.00     13.48      0.00
His     CAT    385174.00     11.28      0.00
His     CAC    470960.00     13.80      0.00
 
Leu     CTG    716525.00     20.99      0.00
Leu     CTA    263871.00      7.73      0.00
Leu     CTT    517919.00     15.17      0.00
Leu     CTC    880959.00     25.81      0.00
 
Pro     CCG    613159.00     17.96      0.00
Pro     CCA    486283.00     14.25      0.00
Pro     CCT    463459.00     13.58      0.00
Pro     CCC    411848.00     12.07      0.00


Coding GC 55.26% 1st letter GC 58.19% 2nd letter GC 45.97% 3rd letter GC 61.61%
Genetic code 1: Standard
Format:
Genetic codes (NCBI)
Codon Usage Table with Amino Acids
A style like CodonFrequency output in GCG Wisconsin PackageTM

CDS Search:

Keyword example: ribosomal protein / MAP kinase
List of codon usage for each CDS [CAUTION: The file is big (> 1000 entries).] (format)
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