Gene/Protein Characteristic Table for FLJ00136

Description

Product ID:	ORK01035
Accession No.:	AK074065
Alias Name:
Clone Name:	sh02543 [Vector Info]
Source:	Human spleen

Features of the cloned DNA sequence	Description

Length: 5291
Physical map
Restiction map
Prediction of protein coding region (GeneMark analysis) for :
cloned DNA seq.
Warning for N-terminal truncation:
NO

Warning for coding interruption:
YES

Integrity of 3' end

Length of 3'UTR 2713 bp

Genome contig ID gi29824588r_76467619
PolyA signal sequence
(None)
+----*----+----*----+----*----+----
TTCAGAGCCTGGGCGACAGAGGGAGACTCCGCCTC
Flanking genome sequence None

Genomic structure deduced by Blast search against draft genome sequences

Features of the predicted protein sequence	Description

Length: 811

Result of homology search against nr database (FASTA output, Multiple alignment)

Entry	ID%	Protein	Source
BAB84891	100.0	FLJ00136 protei...	Homo sapiens
Q7Z403	100.0	Transmembrane c...	Homo sapiens
AAH23597	99.9	Transmembrane c...	Homo sapiens
AAL25836	99.9	Evin1 [Homo sap...	Homo sapiens
AAP69874	99.8	transmembrane c...	Homo sapiens

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of homology search against other entries from Kazusa human cDNA project (FASTA output, Multiple alignment)

Entry	Exp	ID%	HUGE_ID
AK090478	9.1e-17	29.6	FLJ00400

The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.

Result of motif / domain search (InterProScan and SOSUI)

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Result of InterProScan

Search method interpro_ID From To Entry Definition

None - - - - -

Search method	interpro_ID	From	To	Entry	Definition
None	-	-	-	-	-

Prediction of transmembrane (TM) segments

Method From To amino acid sequence

SOSUI 215 237 CVLALHSLGLALLSALQALMPWR

253 275 SYFLFLKTLLAFNALLLLLLVAF

348 370 AYLSTVGVSFFITCITLVYSMAH

442 464 LVWLLCLGTALGCAVAVHVFSEF

479 501 LVLPLVVGLLNLGAPYLCRVLAA

515 536 AICRNLILKLAILGTLCYHWLG

558 580 FLVMDFVLMLLDTLFGELVWRII

610 632 WLGVLFSPLLPAVQIIKLLLVFY

655 677 STVFLTLLCFPAFLGAAVFLCYA

725 747 MENTFFVFLVSALLLAVIYLNIQ

Method	From	To	amino acid sequence
SOSUI	215	237	CVLALHSLGLALLSALQALMPWR
253	275	SYFLFLKTLLAFNALLLLLLVAF
348	370	AYLSTVGVSFFITCITLVYSMAH
442	464	LVWLLCLGTALGCAVAVHVFSEF
479	501	LVLPLVVGLLNLGAPYLCRVLAA
515	536	AICRNLILKLAILGTLCYHWLG
558	580	FLVMDFVLMLLDTLFGELVWRII
610	632	WLGVLFSPLLPAVQIIKLLLVFY
655	677	STVFLTLLCFPAFLGAAVFLCYA
725	747	MENTFFVFLVSALLLAVIYLNIQ

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	cloned DNA seq.
Warning for N-terminal truncation:	NO
Warning for coding interruption:	YES

Length of 3'UTR	2713 bp
Genome contig ID	gi29824588r_76467619
PolyA signal sequence (None)	+--------+--------+----*----+---- TTCAGAGCCTGGGCGACAGAGGGAGACTCCGCCTC
Flanking genome sequence	None