# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj09675.fasta.huge -Q ../query/FLJ00256.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00256, 856 aa vs ./tmplib.10216 library 2210138 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 5.7612+/-0.00543; mu= 15.4623+/- 0.366 mean_var=176.8601+/-39.852, 0's: 0 Z-trim: 4 B-trim: 24 in 1/39 Lambda= 0.096440 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1783 ( 1560 res) fg01285 (1560) 242 46.8 2.7e-05 KIAA1688 ( 1094 res) fh26207 (1094) 224 44.1 0.00012 KIAA1200 ( 1403 res) fg02656 (1403) 217 43.3 0.00028 KIAA2028 ( 1449 res) hg04183 (1449) 208 42.0 0.00068 KIAA0799 ( 2111 res) fg01615y1 (2111) 137 32.4 0.79 KIAA1076 ( 804 res) hj06779 ( 804) 119 29.3 2.6 FLJ00086 ( 399 res) as00086 ( 399) 112 27.8 3.5 KIAA0561 ( 1308 res) hh01676 (1308) 118 29.4 3.8 KIAA1668 ( 791 res) fh11717 ( 791) 110 28.0 6.2 FLJ00221 ( 298 res) sj06160 ( 298) 103 26.4 7 KIAA0512 ( 710 res) hf00239 ( 710) 106 27.4 8.5 KIAA1810 ( 579 res) fk03376 ( 579) 103 26.8 10 KIAA0521 ( 1050 res) hg01387 (1050) 106 27.6 11 KIAA1086 ( 902 res) hj08218 ( 902) 104 27.3 12 KIAA1814 ( 1285 res) ph00952 (1285) 106 27.8 12 KIAA0154 ( 692 res) ha03131 ( 692) 102 26.8 12 KIAA1148 ( 543 res) bg00390 ( 543) 99 26.2 14 FLJ00386 ( 811 res) sj04204 ( 811) 101 26.8 15 KIAA0460 ( 1452 res) bj00064 (1452) 104 27.6 15 KIAA1064 ( 1315 res) hj05008s1 (1315) 103 27.4 16 KIAA0664 ( 1134 res) hk02041 (1134) 102 27.1 16 KIAA1681 ( 1236 res) fh23697 (1236) 102 27.2 17 FLJ00084 ( 641 res) as00084 ( 641) 97 26.1 19 FLJ00381 ( 343 res) sj01456 ( 343) 93 25.1 20 FLJ00252 ( 819 res) sj09394 ( 819) 98 26.4 20 KIAA1029 ( 1015 res) fh00363 (1015) 99 26.6 20 FLJ00378 ( 855 res) sj00210 ( 855) 98 26.4 21 FLJ00324 ( 376 res) sj01157 ( 376) 93 25.2 21 KIAA0575 ( 952 res) hj00216 ( 952) 98 26.5 22 KIAA1840 ( 2443 res) pf01011 (2443) 103 27.8 23 KIAA1862 ( 1070 res) aj00563 (1070) 98 26.5 23 FLJ00254 ( 225 res) sj09520 ( 225) 89 24.3 23 KIAA0821 ( 1566 res) hh02631 (1566) 100 27.1 24 KIAA0554 ( 674 res) hh00877 ( 674) 95 25.8 24 KIAA1509 ( 1365 res) fh14721 (1365) 99 26.8 24 KIAA1768 ( 1207 res) ph00672(revised) (1207) 98 26.6 25 KIAA0616 ( 634 res) hg03623 ( 634) 94 25.6 25 KIAA0659 ( 1049 res) fh22726 (1049) 96 26.2 28 KIAA1849 ( 1114 res) fg05386(revised) (1114) 96 26.3 29 KIAA1075 ( 1505 res) hj06716s1 (1505) 97 26.6 31 KIAA1027 ( 2550 res) fh00156s1 (2550) 100 27.4 31 FLJ00417 ( 600 res) sj06336 ( 600) 91 25.2 33 KIAA0306 ( 1451 res) hg00063 (1451) 96 26.4 33 KIAA1441 ( 1258 res) hg02860b (1258) 95 26.2 34 FLJ00222 ( 656 res) sj06165 ( 656) 91 25.2 35 KIAA0945 ( 797 res) hj04760 ( 797) 92 25.5 35 KIAA1002 ( 962 res) hk09859 ( 962) 93 25.8 35 KIAA0672 ( 824 res) hk02382 ( 824) 92 25.5 36 KIAA2020 ( 572 res) ph01249 ( 572) 89 24.9 39 KIAA1120 ( 1024 res) hg02941 (1024) 92 25.7 40 >>KIAA1783 ( 1560 res) fg01285 (1560 aa) initn: 348 init1: 95 opt: 242 Z-score: 188.5 bits: 46.8 E(): 2.7e-05 Smith-Waterman score: 269; 28.358% identity (52.836% similar) in 335 aa overlap (174-499:1267-1536) 150 160 170 180 190 200 FLJ002 YDKFWSLGSGRDHMMDAIARCEQMAQERGESQRQSPWRIYFRKEFFTPWHDSREDPVSTE : .::....::: : : ... : . KIAA17 LSAERRCLTQPVEDQGVSTQLLAPSGSVCFSYTGTPWKLFLRKEVFYP-RENFSHPYYLR 1240 1250 1260 1270 1280 1290 210 220 230 240 250 260 FLJ002 LIYRQVLRGVWSGEYSFEKEEELVELLARHCYVQLGASAESKAVQELLPSCIPHKLYRTK :. .:.:: ..: . : ... .. : . ...:: . . : KIAA17 LLCEQILRDTFS----------------ESC-IRI-SQNERRKMKDLLGG-LEVDL---- 1300 1310 1320 1330 270 280 290 300 310 320 FLJ002 PPDRWASLVTAACAKAPYTQKQVTPLAVREQVVDAARLQWPLLFSRLFEVITLSGPRLPK ::.: : .:....: ::: .: :::.: : :: KIAA17 -----DSLTT-------------TEDSVKKRIVVAARDNWANYFSRFFPV---SGESGSD 1340 1350 1360 1370 330 340 350 360 370 FLJ002 TQLILAVNWKGLCFLD---------QQEKMLLELSFPEVMGLATNREAQGGQRLLLSTMH .:: :::. .:: .: .: :.: :: ::.:. : .::. : :: KIAA17 VQL-LAVSHRGLRLLKVTQGPGLRPDQLKILCSYSFAEVLGV----ECRGGSTLELSLKS 1380 1390 1400 1410 1420 380 390 400 410 420 430 FLJ002 EEYEFVSPSSVAIAELVALFLEGLKERSIFAMALQDRKATDDTTLLAFKKGDLLVLTKKQ :. . . . :: :: :::. ::. : ...::.. ::. .::.:..:::. : KIAA17 EQLVLHTARARAIEALVELFLNELKKDSGYVIALRSY-ITDNCSLLSFHRGDLIKLLPVA 1430 1440 1450 1460 1470 1480 440 450 460 470 480 490 FLJ002 GLLASENWTLGQNDRTGKTGLVPMACLYTIPTVTKPSAQLLSLLAMSPEKRKLAAQEGQF : .: .:. :..:: : ...:.: ...: :.:. . ..::. KIAA17 TL--EPGWQFGSAG--GRSGLFPA-------DIVQPAAA--PDFSFSKEQRS-GWHKGQL 1490 1500 1510 1520 1530 500 510 520 530 540 550 FLJ002 TEPRPEEPPKEKLHTLEEFSYEFFRAPEKDMVSMAVLPLARARGHLWAYSCEPLRQPLLK .. .: KIAA17 SNGEPGLARWDRASEVRKMGEGQAEARPA 1540 1550 1560 >>KIAA1688 ( 1094 res) fh26207 (1094 aa) initn: 237 init1: 211 opt: 224 Z-score: 176.5 bits: 44.1 E(): 0.00012 Smith-Waterman score: 246; 35.135% identity (65.766% similar) in 111 aa overlap (1-97:786-896) 10 20 FLJ002 WSVS-FRDEIYCQICKQLSENFKTSSLARG :::. .:::.: :.:.: .:::. ::::: KIAA16 ELFKLIQMYMGDRRAKADPLHVALEVATKGWSVQGLRDELYIQLCRQTTENFRLESLARG 760 770 780 790 800 810 30 40 50 60 70 FLJ002 WILLSLCLGCFPPSERFMKYLLNFI-----------GQGPATYGPFCAERLRRTYANGVR : :...::. :::. .: .:: ..: : . .::. .: ..:... .:.. KIAA16 WELMAICLAFFPPTPKFHSYLEGYIYRHMDPVNDTKGVAISTYAKYCYHKLQKAALTGAK 820 830 840 850 860 870 80 90 100 110 120 130 FLJ002 A--EPPTWLELQAVKSKKHIPIQVILATGESLTVPVDSASTSREMCMHIAHKQGLSDHLG . :. :.. .:. : KIAA16 KGLKKPNVEEIRHAKNAVFSPSMFGSALQEVMGMQRERYPERQLPWVQTRLSEEVLALNG 880 890 900 910 920 930 >>KIAA1200 ( 1403 res) fg02656 (1403 aa) initn: 149 init1: 93 opt: 217 Z-score: 170.2 bits: 43.3 E(): 0.00028 Smith-Waterman score: 282; 24.289% identity (54.264% similar) in 387 aa overlap (5-351:932-1308) 10 20 30 FLJ002 WSVSFRDEIYCQICKQLS-ENFKTSSLARGWILL ...:::::. :: : . . :: . : :: KIAA12 FINVPVEAASVDYHVSLAQTALQVCLVHPELQSEIYCQLMKQTSCRPPQKYSLMQCWQLL 910 920 930 940 950 960 40 50 60 70 80 FLJ002 SLCLGCFPPSERFMKYLLNFIGQ--GPAT----YGPFCAERLRRTYANGVRAEPPTWLEL .:: : :...:. :. . . . : . :. .: . ..:: .: : :. .:. KIAA12 ALCAPLFLPQHHFLWYVKQQLQRHADPRSETGQYATYCQRAVERTLRTGEREARPSRMEV 970 980 990 1000 1010 1020 90 100 110 120 130 FLJ002 QAV--KSKKH--IP--IQVILATGESLTVPVDSASTSREMCMHIAHKQGLS--DHLGFSL .. .. : .: : : ...: .: :..:: :. ... .. :. .: ::.: KIAA12 VSILLRNPFHHSLPFSIPVHFTNGTYHVVGFDGSSTVDEFLQRLNQEIGMRKPSHSGFAL 1030 1040 1050 1060 1070 1080 140 150 160 170 180 FLJ002 QVAVYDKFWSLGSGRD--HMM-------DAIARCEQMAQERGESQRQSPWRI---YFRKE : . :::: : . :::.. :: .: .. .. :. ..... KIAA12 -------FTDDPSGRDLEHCLQGSVKICDAISKWEQAMKELHPGKSEGGTRVVKLMYKNR 1090 1100 1110 1120 1130 190 200 210 220 230 FLJ002 FFTPWHDSREDPVSTELIYRQVLRGVWSGEYSFEKEE--ELVELLARHCYVQL------- .. . . : :. :. : . .:.. ..:: :.. :.:. : .: KIAA12 LYFRSQVKGETDRERLLLASQTSREIVAGRFPINKELALEMAALMAQVEYGDLEKPALPG 1140 1150 1160 1170 1180 1190 240 250 260 270 280 290 FLJ002 -GASAESKA---VQELLPSCIPHKLYRTKPPDRWASLVTAACAKAPYTQKQVTPLAVREQ :... .:: .:..: :.. . : .. :. .: : : .: KIAA12 PGGTSPAKAQHLLQQVLDRFHPRRYRHGAPAEQLRHLADMLTTKWATLQGCSPPECIRIY 1200 1210 1220 1230 1240 1250 300 310 320 330 340 350 FLJ002 VVDAARLQWPLLFSRLFEVITLSGPRLPKTQLILAVNWKGLCFLDQQEKMLLELSFPEVM .. .:: .::.. ..:: . . .. . .::: :. .::.. : .....: KIAA12 LT-VAR-KWPFFGAKLFAAQPAQLSSKENALVWIAVNEDGVSILDHNT-MQVHITYPYSS 1260 1270 1280 1290 1300 1310 360 370 380 390 400 410 FLJ002 GLATNREAQGGQRLLLSTMHEEYEFVSPSSVAIAELVALFLEGLKERSIFAMALQDRKAT KIAA12 VTTFGGCRDDFMLVIRSIPDKSSGKSHIEKLIFRMAAPKIAEATFIMASYMNHCTTTVNP 1320 1330 1340 1350 1360 1370 >>KIAA2028 ( 1449 res) hg04183 (1449 aa) initn: 214 init1: 87 opt: 208 Z-score: 163.2 bits: 42.0 E(): 0.00068 Smith-Waterman score: 225; 21.472% identity (51.125% similar) in 489 aa overlap (5-445:972-1445) 10 20 30 FLJ002 WSVSFRDEIYCQICKQLSENFKTSSLA--RGWIL ...:: ::. :: . .. . .:: : KIAA20 FINAAVDSPAIDYHISLAQSALQICLTHPELQNEICCQLIKQTRRRQPQNQPGPLQGWQL 950 960 970 980 990 1000 40 50 60 70 80 FLJ002 LSLCLGCFPPSERFMKYLLNFIGQGPAT------YGPFCAERLRRTYANGVRAEPPTWLE :.::.: : : . :. : . .. . :. .: . ..:: :: : :. .: KIAA20 LALCVGLFLPHHPFLWLLRLHLKRNADSRTEFGKYAIYCQRCVERTQQNGDREARPSRME 1010 1020 1030 1040 1050 1060 90 100 110 120 130 FLJ002 LQA--VKSKKH--IP--IQVILATGESLTVPVDSASTSREMCMHIAHKQGLSD--HLGFS . . ... : .: : : . .: .: :...: .:. . . :. . ::. KIAA20 ILSTLLRNPYHHSLPFSIPVHFMNGIYQVVGFDASTTVEEFLNTLNQDTGMRKPAQSGFA 1070 1080 1090 1100 1110 1120 140 150 160 170 180 FLJ002 LQVAVYDKFWSLGSGRD--HMM-------DAIARCEQMAQER--GESQRQSPWRIYFRKE : : . :::: : . : :.. :: ..:. :. . :. .... KIAA20 L-------FTDDPSGRDLEHCLQGNIKICDIISKWEQASKEQQPGKCEGTRTVRLTYKNR 1130 1140 1150 1160 1170 190 200 210 220 230 240 FLJ002 FFTPWHDSREDPVSTELIYRQVLRGVWSGEYSFEKEEELVELLARHCYVQLGASAE--SK .. . : :.. :. . .: . ..:. : :. : :..: . : KIAA20 LYFSVQARGETDREKLLLMYQTNDQIINGLFPLNKDLAL-EMAALLSQVEIGDFERPFST 1180 1190 1200 1210 1220 1230 250 260 270 280 290 300 FLJ002 AVQELLPSCIPHKLYRTKPPDRWASLVTAACAKAPYTQ--KQVTP--LAVR-EQVVDAAR . .. .: .. . . . .:.. : .... .:.: ....: .: KIAA20 PAGHVTNQCKVNQTLKQVIEKFYPKRYRDGCSEEQLRQLCQRLSTRWMALRGHSAADCVR 1240 1250 1260 1270 1280 1290 310 320 330 340 350 FLJ002 L------QWPLLFSRLFEVITLSGPRLPKTQLILAVNWKGLCFLDQQEKMLLELSFPEVM . .::.. ..:: . .. : .: : :::. :: .:. . .: : .:. KIAA20 IYLTVARKWPFFGAKLFLAKPITPSSLGSTFLWLAVHEDGLSLLEYN-SMRLIVSYV-YK 1300 1310 1320 1330 1340 1350 360 370 380 390 400 FLJ002 GLATNREAQGGQRLLLSTMHEE--------YEFVSPSSVAIAELVALFLEGLKERSIFAM .: : : ..... : . . ...:. . :. :.: ......... KIAA20 SLMTFGGYQDDFMVVINNTHSKDKPTEKLLFAMAKPKILEITLLIASYINNFHQQKA--- 1360 1370 1380 1390 1400 410 420 430 440 450 460 FLJ002 ALQDRKATDDTTLLAFKKGDLLVLTKKQGLLASENWTLGQNDRTGKTGLVPMACLYTIPT :.. .: . : : .: . .: ::.: : : KIAA20 AFHHLSA--PALLSAQTRGPQARMMGSQPLLSSSRPTKGPTLL 1410 1420 1430 1440 470 480 490 500 510 520 FLJ002 VTKPSAQLLSLLAMSPEKRKLAAQEGQFTEPRPEEPPKEKLHTLEEFSYEFFRAPEKDMV >>KIAA0799 ( 2111 res) fg01615y1 (2111 aa) initn: 66 init1: 66 opt: 137 Z-score: 108.2 bits: 32.4 E(): 0.79 Smith-Waterman score: 216; 25.610% identity (54.065% similar) in 246 aa overlap (5-237:1655-1892) 10 20 30 FLJ002 WSVSFRDEIYCQICKQLSENFKTSSLAR--GWIL .:::.:::. :: .. . .:.. .: . KIAA07 IFNSLQQLESMSDPIPIIQGILQTGHDLRPLRDELYCQLIKQTNKVPHPGSVGNLYSWQI 1630 1640 1650 1660 1670 1680 40 50 60 70 80 FLJ002 LSLCLGC-FPPSERFMKYL---LNFIG-QGPAT----YGPFCAERLRRTYANGVRAEPPT :. ::.: : ::. ..::: :. : : :.: :. : : :..: : :. KIAA07 LT-CLSCTFLPSRGILKYLKFHLKRIREQFPGTEMEKYALFTYESLKKTK---CREFVPS 1690 1700 1710 1720 1730 1740 90 100 110 120 130 140 FLJ002 WLELQAVKSKKHIPIQVILATGESLTVPVDSASTSREMCMHIAHKQGLSDHLGFSLQVAV :..:. .... : : : . ..: .:. :. .. . .. : .. KIAA07 RDEIEALIHRQEMTSTVYCHGGGSCKITINSHTTAGEVVEKLIRGLAMEDSRNMFALFEY 1750 1760 1770 1780 1790 1800 150 160 170 180 190 200 FLJ002 YDKFWSLGSGRDHMMDAIARCEQMA--QERGESQRQSPWRIYFRKEFFTPWHDSREDPVS . . .: . :..:. :..: .: :. ::..::. : . .: : KIAA07 NGHVDKAIESRTVVADVLAKFEKLAATSEVGDL----PWKFYFKLYCFLDTDNVPKDSVE 1810 1820 1830 1840 1850 210 220 230 240 250 260 FLJ002 TELIYRQVLRGVWSGEYSFEKEEELVELLARHCYVQLGASAESKAVQELLPSCIPHKLYR ....:. ..: :.. .:. : : :.: KIAA07 FAFMFEQAHEAVIHGHHPAPEENLQVLAALRLQYLQGDYTLHAAIPPLEEVYSLQRLKAR 1860 1870 1880 1890 1900 1910 270 280 290 300 310 320 FLJ002 TKPPDRWASLVTAACAKAPYTQKQVTPLAVREQVVDAARLQWPLLFSRLFEVITLSGPRL KIAA07 ISQSTKTFTPCERLEKRRTSFLEGTLRRSFRTGSVVRQKVEEEQMLDMWIKEEVSSARAS 1920 1930 1940 1950 1960 1970 >>KIAA1076 ( 804 res) hj06779 (804 aa) initn: 171 init1: 67 opt: 119 Z-score: 98.9 bits: 29.3 E(): 2.6 Smith-Waterman score: 119; 34.615% identity (48.718% similar) in 78 aa overlap (774-849:368-439) 750 760 770 780 790 800 FLJ002 KISDKVGRAGAGQTVGGRAVSEALGAACGGLSLPGAPMLDQAAGTEVGG--VLEQSQLHT ::: : :.. ::. .: .: .: .: KIAA10 LPPLLPAPLASCPPPMKRKPGRPRRSPPSMLSLDG-PLVRPPAGAALGRELLLLPGQPQT 340 350 360 370 380 390 810 820 830 840 850 FLJ002 PIAHAQPTPAQHPGRRRPLDQNPAGSQEDSPRKPPNFPVPSPSPGHQPEGGRLLL :. :. : : :: :: : ::. : : : : .: KIAA10 PV-----FPSTHDPRTVTLDFRNAGIPAPPPPLPPQPPPPPPPPPVEPTKLPFKELDNQW 400 410 420 430 440 450 KIAA10 PSEAIPPGPRGRDEVTEEYMELAKSRGPWRRPPKKRHEDLVPPAGSPELSPPQPLFRPRS 460 470 480 490 500 510 >>FLJ00086 ( 399 res) as00086 (399 aa) initn: 140 init1: 58 opt: 112 Z-score: 96.6 bits: 27.8 E(): 3.5 Smith-Waterman score: 114; 31.783% identity (53.488% similar) in 129 aa overlap (726-846:234-347) 700 710 720 730 740 750 FLJ002 SRICHKIYFPNDTSEMLEVVANTRVRDVCDSIATRLQLASWEGCSLFIKISDKVGRAG-A :... : ::: :. : :::. . FLJ000 RKGGPPFTQEEEEEDGGPALQELLSTRPTGSVSSTLGLAS-------IQPS-KVGKKKKV 210 220 230 240 250 760 770 780 790 800 810 FLJ002 GQTVGGRAVSEALGAAC--GGLSLPGAPMLDQAAGTEVGGVLEQSQLHTPIAHAQPTPAQ :. : .. . ..: :.:. : :: ..: : . :. ... . : : :. .: . FLJ000 GSEKPGTTLPQPPPTTCPPGALQAPEAPA-SRAEGPVA--VVVNGHTEGP-APARSAPKE 260 270 280 290 300 310 820 830 840 850 FLJ002 HPGRRRPLDQNPAGS-QEDSPRK----PPNFPVPSPSPGHQPEGGRLLL :: ::: . : . ::: : :: .: : :: FLJ000 PPGLPRPLGSFPCPTPQEDFPALGGPCPPRMP---PPPGFSAVVLLKGTPPPPPPGLVPP 320 330 340 350 360 FLJ000 ISKPPPGFSGLLPSPHPACVPSPATTTTTKA 370 380 390 >>KIAA0561 ( 1308 res) hh01676 (1308 aa) initn: 151 init1: 87 opt: 118 Z-score: 96.0 bits: 29.4 E(): 3.8 Smith-Waterman score: 118; 32.500% identity (52.500% similar) in 80 aa overlap (775-853:1135-1213) 750 760 770 780 790 800 FLJ002 ISDKVGRAGAGQTVGGRAVSEALGAACGGLSLPGA-PMLDQAAGTEVGGVLEQSQLHTPI : :.: : .. :. ..: . :.:: KIAA05 LPGSPTHSLSPSPTTPCRSPAPDVPADTTASPPSASPSSSSPASPAAAGHTRPSSLHGLA 1110 1120 1130 1140 1150 1160 810 820 830 840 850 FLJ002 AHAQPTPAQHPGRRRPLDQNPAGSQEDSPRKPPNFPVPSPSPGHQPEGGRLLL :. : : . :::. .. : . : . : ::: ::: : .: KIAA05 AKLGP-PRPKTGRRKSTSSIPPSPLACPPISAPPPRSPSPLPGHPPAPARSPRLRRGQSA 1170 1180 1190 1200 1210 1220 KIAA05 DKLGTGERLDGEAGRRTRGPEAELVVMRRLHLSERRDSFKKQEAVQEVSFDEPQEEATGL 1230 1240 1250 1260 1270 1280 >>KIAA1668 ( 791 res) fh11717 (791 aa) initn: 141 init1: 72 opt: 110 Z-score: 92.2 bits: 28.0 E(): 6.2 Smith-Waterman score: 110; 32.877% identity (53.425% similar) in 73 aa overlap (778-849:183-249) 750 760 770 780 790 800 FLJ002 KVGRAGAGQTVGGRAVSEALGAACGGLSLPGAPMLDQAAGTEVGGVLEQSQLHTPIAHAQ :.: . ::.:. : .: :. : KIAA16 TRSGTRPGPFSQPKQQHQQQLAEDAKDVPGGGPSSSAPAGAEADG-----PKASPEARPQ 160 170 180 190 200 810 820 830 840 850 FLJ002 -PTPAQHPGRRRPLDQNPAGSQEDSPRKPPNFPVPSPSPGHQPEGGRLLL :: . ::. . : . ::: .::: . .:.: : .: KIAA16 IPTKPRVPGKLQELASPPAGRPTPAPRKASESTTPAP-PTPRPRSSLQQENLVEQAGSSS 210 220 230 240 250 260 KIAA16 LVNGRLHELPVPKPRGTPKPSEGTPAPRKDPPWITLVQAEPKKKPAPLPPSSSPGPPSQD 270 280 290 300 310 320 >>FLJ00221 ( 298 res) sj06160 (298 aa) initn: 89 init1: 56 opt: 103 Z-score: 91.1 bits: 26.4 E(): 7 Smith-Waterman score: 103; 40.000% identity (53.333% similar) in 45 aa overlap (810-849:208-252) 780 790 800 810 820 830 FLJ002 PMLDQAAGTEVGGVLEQSQLHTPIAHAQPTPAQHPGRRRPLDQNPAGSQEDSPR--KPPN ::: : .: ::.: . . : .::: FLJ002 HIFHTSCLRSWFQRQQTCPTCRMDVLRASLPAQSPPPPEPADQGPPPAPHPPPLLPQPPN 180 190 200 210 220 230 840 850 FLJ002 FP---VPSPSPGHQPEGGRLLL :: .: :: : FLJ002 FPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAVAPPSTSAGEPLGTVTARGRQGWNT 240 250 260 270 280 290 856 residues in 1 query sequences 2210138 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:47:06 2009 done: Fri Feb 27 10:47:06 2009 Total Scan time: 0.740 Total Display time: 0.200 Function used was FASTA [version 34.26.5 April 26, 2007]