# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj08681.fasta.nr -Q ../query/FLJ00248.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00248, 501 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7816108 sequences Expectation_n fit: rho(ln(x))= 5.9484+/-0.000207; mu= 9.9298+/- 0.012 mean_var=138.4001+/-26.026, 0's: 31 Z-trim: 51 B-trim: 27 in 1/63 Lambda= 0.109020 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|18676698|dbj|BAB85001.1| FLJ00248 protein [Homo ( 501) 3659 586.9 4.2e-165 gi|206558307|sp|Q8TEE9.2|SAP25_HUMAN RecName: Full ( 199) 1453 239.5 6.4e-61 gi|109069278|ref|XP_001086986.1| PREDICTED: hypoth ( 204) 1323 219.0 9.4e-55 gi|119601434|gb|EAW81028.1| hCG20460, isoform CRA_ ( 157) 667 115.7 9.1e-24 gi|123778626|sp|Q1EHW4.1|SAP25_MOUSE RecName: Full ( 186) 530 94.2 3.1e-17 gi|3135309|gb|AAC78793.1| leucin rich neuronal pro ( 832) 330 63.6 2.4e-07 gi|119596925|gb|EAW76519.1| leucine-rich repeats a ( 832) 326 62.9 3.7e-07 gi|109495430|ref|XP_213736.3| PREDICTED: hypotheti ( 254) 285 55.9 1.5e-05 gi|114643600|ref|XP_001151718.1| PREDICTED: hypoth ( 594) 266 53.3 0.00021 gi|115725094|ref|XP_799837.2| PREDICTED: hypotheti (2055) 265 53.8 0.00052 gi|190653684|gb|EDV50927.1| GG15230 [Drosophila er ( 389) 253 51.1 0.00065 gi|123122921|emb|CAM20992.1| procollagen type IV a ( 799) 257 52.1 0.00067 gi|26348681|dbj|BAC37980.1| unnamed protein produc ( 799) 257 52.1 0.00067 gi|158278101|gb|EDP03866.1| DnaJ-like protein [Chl ( 950) 258 52.3 0.00067 gi|109471897|ref|XP_001069692.1| PREDICTED: hypoth ( 365) 251 50.7 0.00078 gi|2317962|gb|AAB66420.1| unknown [murid herpesvir ( 774) 254 51.6 0.00091 gi|114555270|ref|XP_513270.2| PREDICTED: alpha 1 t (1590) 258 52.6 0.00094 gi|211607|gb|AAA69962.1| alpha-2 type I collagen [ ( 896) 254 51.6 0.001 gi|115304804|gb|AAI23528.1| WAS/WASL interacting p ( 503) 250 50.7 0.0011 gi|2317963|gb|AAB66421.1| unknown [murid herpesvir ( 706) 252 51.2 0.0011 gi|2317964|gb|AAB66422.1| unknown [murid herpesvir ( 727) 252 51.2 0.0011 gi|193892261|gb|EDV91127.1| GH15872 [Drosophila gr (2835) 260 53.2 0.0011 gi|5921192|sp|P02467.2|CO1A2_CHICK RecName: Full=C (1362) 254 51.8 0.0013 gi|206597434|ref|NP_001073182.2| alpha 2 type I co (1363) 254 51.8 0.0013 gi|133915898|emb|CAM06011.1| PE-PGRS family protei (1984) 255 52.2 0.0015 gi|298642|gb|AAB25797.1| type XVI collagen alpha 1 (1186) 249 51.0 0.0021 gi|119628000|gb|EAX07595.1| collagen, type XVI, al (1602) 249 51.1 0.0025 gi|119628001|gb|EAX07596.1| collagen, type XVI, al (1604) 249 51.1 0.0025 gi|143811380|sp|Q07092.2|COGA1_HUMAN RecName: Full (1604) 249 51.1 0.0025 gi|115518233|gb|ABJ06217.1| peptidase C14, caspase (1067) 245 50.3 0.003 gi|109100138|ref|XP_001090299.1| PREDICTED: simila ( 412) 239 48.9 0.0031 gi|109100136|ref|XP_001090185.1| PREDICTED: simila ( 493) 240 49.1 0.0031 gi|109100128|ref|XP_001090998.1| PREDICTED: simila ( 503) 240 49.1 0.0032 gi|109100126|ref|XP_001090880.1| PREDICTED: simila ( 510) 240 49.1 0.0032 gi|74718524|sp|Q9H6K5.1|YS027_HUMAN RecName: Full= ( 616) 239 49.1 0.004 gi|198132708|gb|EDY68374.1| GA27442 [Drosophila ps ( 935) 241 49.6 0.0043 gi|193915016|gb|EDW13883.1| GI23637 [Drosophila mo (2604) 247 51.1 0.0043 gi|158108052|gb|ABW10249.1| Membrane protein invol (1273) 242 49.9 0.0047 gi|177179|gb|AAA62822.1| alpha-2 type VIII collage ( 635) 237 48.8 0.0051 gi|149387091|gb|ABN67187.2| predicted protein [Pic ( 795) 237 48.9 0.0059 gi|66365802|gb|AAH96297.1| COL8A2 protein [Homo sa ( 657) 235 48.5 0.0065 gi|73980990|ref|XP_540228.2| PREDICTED: similar to ( 483) 233 48.0 0.0066 gi|45644957|sp|P25067.2|CO8A2_HUMAN RecName: Full= ( 703) 235 48.5 0.0068 gi|18676606|dbj|BAB84955.1| FLJ00201 protein [Homo ( 705) 235 48.5 0.0068 gi|180758|gb|AAA58427.1| alpha-1 type XVI collagen (1603) 239 49.6 0.0075 gi|109475482|ref|XP_233542.4| PREDICTED: similar t ( 699) 234 48.4 0.0076 gi|114643598|ref|XP_001151662.1| PREDICTED: hypoth ( 582) 232 48.0 0.0084 gi|194207696|ref|XP_001499169.2| PREDICTED: simila ( 706) 233 48.2 0.0085 gi|158114428|gb|ABW16625.1| conserved hypothetical ( 466) 230 47.5 0.009 gi|189527581|ref|XP_001336182.2| PREDICTED: simila ( 700) 232 48.1 0.0094 >>gi|18676698|dbj|BAB85001.1| FLJ00248 protein [Homo sap (501 aa) initn: 3659 init1: 3659 opt: 3659 Z-score: 3120.4 bits: 586.9 E(): 4.2e-165 Smith-Waterman score: 3659; 100.000% identity (100.000% similar) in 501 aa overlap (1-501:1-501) 10 20 30 40 50 60 FLJ002 GWPGPGHPWPAGLAASGVEGLGGRTAGVAGVVSAAINRSQKPSGWPSGVTVSESTCVAGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GWPGPGHPWPAGLAASGVEGLGGRTAGVAGVVSAAINRSQKPSGWPSGVTVSESTCVAGL 10 20 30 40 50 60 70 80 90 100 110 120 FLJ002 LGGPLFPEFTAQSPGGARGSPAGARATWPGDAQGASVAARPLGWVRQEGTFAPRRGGRLR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 LGGPLFPEFTAQSPGGARGSPAGARATWPGDAQGASVAARPLGWVRQEGTFAPRRGGRLR 70 80 90 100 110 120 130 140 150 160 170 180 FLJ002 GPGRAAGTRRYRPALGNAECCPGRRRGGARARRRRPRDQAFRRARTRASPGAPERTPPGS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GPGRAAGTRRYRPALGNAECCPGRRRGGARARRRRPRDQAFRRARTRASPGAPERTPPGS 130 140 150 160 170 180 190 200 210 220 230 240 FLJ002 WGHPHGTGEGLGRSRGGTATGGLHAFTTRSTEASPLSLLEIGSLGLPCTRHPWAPGEGAW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 WGHPHGTGEGLGRSRGGTATGGLHAFTTRSTEASPLSLLEIGSLGLPCTRHPWAPGEGAW 190 200 210 220 230 240 250 260 270 280 290 300 FLJ002 GRCGCSLSPCPSSPQPPSRSPSWIWREQLLLPHHLPGPATEQPPGAPDPRSPQVAWEVAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 GRCGCSLSPCPSSPQPPSRSPSWIWREQLLLPHHLPGPATEQPPGAPDPRSPQVAWEVAP 250 260 270 280 290 300 310 320 330 340 350 360 FLJ002 SRMTPLAPWDPKYEAKAGPRPVWGANCSSGASFSGRTLCHPSFWPLYEAASGRGLRPVAP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 SRMTPLAPWDPKYEAKAGPRPVWGANCSSGASFSGRTLCHPSFWPLYEAASGRGLRPVAP 310 320 330 340 350 360 370 380 390 400 410 420 FLJ002 ATGHWNGQQAPPDAGFPVVCCEDVFLSDPLLPRGQRVPLYLSKAPQQMMGSLKLLPPPPI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 ATGHWNGQQAPPDAGFPVVCCEDVFLSDPLLPRGQRVPLYLSKAPQQMMGSLKLLPPPPI 370 380 390 400 410 420 430 440 450 460 470 480 FLJ002 MSARVLPRPSPSRGPSTAWLSGPELIALTGLLQMSQGEPRPSSSAVGPPDHTSDPPSPCG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|186 MSARVLPRPSPSRGPSTAWLSGPELIALTGLLQMSQGEPRPSSSAVGPPDHTSDPPSPCG 430 440 450 460 470 480 490 500 FLJ002 SPSSSQGADLSLPQTPDTHCP ::::::::::::::::::::: gi|186 SPSSSQGADLSLPQTPDTHCP 490 500 >>gi|206558307|sp|Q8TEE9.2|SAP25_HUMAN RecName: Full=His (199 aa) initn: 1453 init1: 1453 opt: 1453 Z-score: 1249.9 bits: 239.5 E(): 6.4e-61 Smith-Waterman score: 1453; 100.000% identity (100.000% similar) in 199 aa overlap (303-501:1-199) 280 290 300 310 320 330 FLJ002 HHLPGPATEQPPGAPDPRSPQVAWEVAPSRMTPLAPWDPKYEAKAGPRPVWGANCSSGAS :::::::::::::::::::::::::::::: gi|206 MTPLAPWDPKYEAKAGPRPVWGANCSSGAS 10 20 30 340 350 360 370 380 390 FLJ002 FSGRTLCHPSFWPLYEAASGRGLRPVAPATGHWNGQQAPPDAGFPVVCCEDVFLSDPLLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|206 FSGRTLCHPSFWPLYEAASGRGLRPVAPATGHWNGQQAPPDAGFPVVCCEDVFLSDPLLP 40 50 60 70 80 90 400 410 420 430 440 450 FLJ002 RGQRVPLYLSKAPQQMMGSLKLLPPPPIMSARVLPRPSPSRGPSTAWLSGPELIALTGLL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|206 RGQRVPLYLSKAPQQMMGSLKLLPPPPIMSARVLPRPSPSRGPSTAWLSGPELIALTGLL 100 110 120 130 140 150 460 470 480 490 500 FLJ002 QMSQGEPRPSSSAVGPPDHTSDPPSPCGSPSSSQGADLSLPQTPDTHCP ::::::::::::::::::::::::::::::::::::::::::::::::: gi|206 QMSQGEPRPSSSAVGPPDHTSDPPSPCGSPSSSQGADLSLPQTPDTHCP 160 170 180 190 >>gi|109069278|ref|XP_001086986.1| PREDICTED: hypothetic (204 aa) initn: 1212 init1: 1102 opt: 1323 Z-score: 1139.3 bits: 219.0 E(): 9.4e-55 Smith-Waterman score: 1323; 91.176% identity (94.608% similar) in 204 aa overlap (303-501:1-204) 280 290 300 310 320 330 FLJ002 HHLPGPATEQPPGAPDPRSPQVAWEVAPSRMTPLAPWDPKYEAKAGPRPVWGANCSSGAS :::::::::::::::: .:::::::::::: gi|109 MTPLAPWDPKYEAKAGRQPVWGANCSSGAS 10 20 30 340 350 360 370 380 390 FLJ002 FSGRTLCHPSFWPLYEAASGRGLRPVAPATGHWNGQQAPPDAGFPVVCCEDVFLSDPLLP :::::::::::::::::::::::::::::::::::::: :::::::.::::::::::::: gi|109 FSGRTLCHPSFWPLYEAASGRGLRPVAPATGHWNGQQAHPDAGFPVMCCEDVFLSDPLLP 40 50 60 70 80 90 400 410 420 430 440 450 FLJ002 RGQRVPLYLSKAPQQMMGSLKLLPPPPIMSARVLPRPSPSRGPSTAWLSGPELIALTGLL .::::::::::::::.::::::::::::::: :::: ::::.:::::::::::::::::: gi|109 QGQRVPLYLSKAPQQVMGSLKLLPPPPIMSAWVLPRLSPSRSPSTAWLSGPELIALTGLL 100 110 120 130 140 150 460 470 480 490 500 FLJ002 QMSQGEPRPSSSAV-----GPPDHTSDPPSPCGSPSSSQGADLSLPQTPDTHCP ::::::::::::.. :::: :::::::::::::::::: ::::::::::: gi|109 QMSQGEPRPSSSVAATPPAGPPDPTSDPPSPCGSPSSSQGADPSLPQTPDTHCP 160 170 180 190 200 >>gi|119601434|gb|EAW81028.1| hCG20460, isoform CRA_b [H (157 aa) initn: 667 init1: 667 opt: 667 Z-score: 583.0 bits: 115.7 E(): 9.1e-24 Smith-Waterman score: 671; 62.874% identity (71.257% similar) in 167 aa overlap (303-469:1-154) 280 290 300 310 320 330 FLJ002 HHLPGPATEQPPGAPDPRSPQVAWEVAPSRMTPLAPWDPKYEAKAGPRPVWGANCSSGAS :::::::::.:::::::: ::::::::::: gi|119 MTPLAPWDPNYEAKAGPRLVWGANCSSGAS 10 20 30 340 350 360 370 380 390 FLJ002 FSGRTLCHPSFWPLYEAASGRGLRPVAPATGHWNGQQAPPDAGFPVVCCEDVFLSDPLLP :::.:.:::::::::::::::::::::::::::::::: :::::::.::::::::::::: gi|119 FSGQTVCHPSFWPLYEAASGRGLRPVAPATGHWNGQQAAPDAGFPVMCCEDVFLSDPLLP 40 50 60 70 80 90 400 410 420 430 440 450 FLJ002 RGQRVPLYLSKAPQQMMGSLKLLPPPPIMSARVLPRPSPSRGPSTAWLSGPELIALTGLL :: : ..: : :: .: . :. . .: . : :: : : gi|119 RGAACPPVPVQGPPADDG----LPE----TAAAAPHHVCQGSPPPVTLPGP----LHCLA 100 110 120 130 460 470 480 490 500 FLJ002 QMSQGEPRPSSSAVGPPDHTSDPPSPCGSPSSSQGADLSLPQTPDTHCP : . : : :.: : gi|119 QRA-GADRSHWPAAGEPGGA 140 150 >>gi|123778626|sp|Q1EHW4.1|SAP25_MOUSE RecName: Full=His (186 aa) initn: 468 init1: 226 opt: 530 Z-score: 465.6 bits: 94.2 E(): 3.1e-17 Smith-Waterman score: 530; 50.000% identity (67.857% similar) in 196 aa overlap (303-489:1-185) 280 290 300 310 320 330 FLJ002 HHLPGPATEQPPGAPDPRSPQVAWEVAPSRMTPLAPWDPKYEAKAGPRPVWGANCSSGAS :.:: ::...:.:::: : .:. :.: gi|123 MSPLPLRDPSHQANAGPRLVE-PSCGPGVS 10 20 340 350 360 370 380 390 FLJ002 FSGRTLCHPSFWPLYEAASGRGLRPVAPATGHW--NGQQAPPDAGFPVVCCEDVFLSDPL .:.::::::: ::.:. :: .:.:.. . : . :.: :: ::::: ::: gi|123 LSNRTLCHPS-WPMYDNW-GR-----SPTTSERPEEEQVVSKDTGVPVRNYEDVFLLDPL 30 40 50 60 70 80 400 410 420 430 440 450 FLJ002 LPRGQRVPLYLSKAPQQMMGSLKLLPPPPIMSARVLPRPSPSRGPSTAWLSGPELIALTG :: :::::: :.: ::: : : ::: :::::: : .:: :.. :..::: :.:::.: gi|123 LPCGQRVPLILTKPPQQAMDSRKLLLPPPIMSPSV--HPSSSQACSSTWLSEAEMIALAG 90 100 110 120 130 140 460 470 480 490 500 FLJ002 LLQMSQGEPRPS-------SSAVGPPDHTSDPPSPCGSPSSSQGADLSLPQTPDTHCP :::::::: :. :.. : .:. :.: :. : : :.: gi|123 LLQMSQGEQTPNCVASSLPSTSCPDPVSVSEDPGPSGDQSCS-GTDT 150 160 170 180 >>gi|3135309|gb|AAC78793.1| leucin rich neuronal protein (832 aa) initn: 326 init1: 276 opt: 330 Z-score: 288.1 bits: 63.6 E(): 2.4e-07 Smith-Waterman score: 336; 30.556% identity (48.232% similar) in 396 aa overlap (67-437:458-825) 40 50 60 70 80 90 FLJ002 NRSQKPSGWPSGVTVSESTCVAGLLGGPLFPEFTAQSPGGARG--SPAGARATW-PGDAQ :. .:.. :: : ::: : :. : gi|313 PRKDSLLKPGLRAVVGGAAAVSTQAMHNGSPKSSASQAGGCSGAGSPAPAPASQEPLPIA 430 440 450 460 470 480 100 110 120 130 140 FLJ002 GASVAA--RPLGWVRQEGTFAPRR----GGRLRGPGRAAGTRRYRPALGNAECCPGRRRG : ..: :::: ... ..: : :. .: . ::: : . . . . : gi|313 GPATAPAPRPLGSIQRPNSFLFRSSSQSGSGPSSPDSVLRPRRY-PQVPDEKDLMTQLRQ 490 500 510 520 530 540 150 160 170 180 190 200 FLJ002 GARARRRRP--RDQAFRRARTRASPGAPERTPPGSWGHPHGTGEGLGRSRGGTATGGLHA ..: .:: .: : : .. : : : . .. . . : .... gi|313 VLESRLQRPLPEDLAEALASGVILCQLANQLRPRSVPFIHVPSPAVPKLSALKARKNVES 550 560 570 580 590 600 210 220 230 240 250 260 FLJ002 FTTRSTEAS-PLSLLEIGSLGLPCTRHPWAPGEGAWGRCGCSLSPCPSSPQPPSRSPSWI : . . : . : : : : . . : : : . : : : : . . . gi|313 FLEACRKMGVPEADLCSPSDLLQGTARGLRTALEAVKRVGGKALP-PLWP-PSGLGGFVV 610 620 630 640 650 660 270 280 290 300 310 320 FLJ002 WREQLLLPHHLPGPATEQPPGAPDPRSPQVAWEVAPSRMTPLAPWDPKYEAKAGPRPVW- . :.: .. :::::::::::::::::::::::::::::::::::: gi|313 FYVVLMLLLYVTYTRLL------DPRSPQVAWEVAPSRMTPLAPWDPKYEAKAGPRPVWV 670 680 690 700 710 330 340 350 360 370 FLJ002 --GANCSSGASFSGRT-------LC--HPSFWPLYEAASGRGLRPVAPATGHWNGQQAPP : .:..: . .: . :: :: . . ... : :.: .:. : : gi|313 SWGQTCGTGWGAQGAVRWPEAPVLCPPHPRGPTVAQEPRSQAGRCVTPHSGRCMKQ---P 720 730 740 750 760 770 380 390 400 410 420 430 FLJ002 DAGFPVVCCEDVFLSDPL-LPRGQRVPLYLSKAPQQMMGSLKLLPPPPIMSARVLPRPSP :: .: : ::.: . :. :: :.:: . :.:.: :. gi|313 RAG----------VSGPWPLPQGTGMD---SRRPQ-MQGSRWC--AVKMSSSRTLCCPGG 780 790 800 810 440 450 460 470 480 490 FLJ002 SRGPSTAWLSGPELIALTGLLQMSQGEPRPSSSAVGPPDHTSDPPSPCGSPSSSQGADLS : : : gi|313 SVFPCTCPRPPSR 820 830 >>gi|119596925|gb|EAW76519.1| leucine-rich repeats and c (832 aa) initn: 326 init1: 276 opt: 326 Z-score: 284.7 bits: 62.9 E(): 3.7e-07 Smith-Waterman score: 332; 30.303% identity (48.737% similar) in 396 aa overlap (67-437:458-825) 40 50 60 70 80 90 FLJ002 NRSQKPSGWPSGVTVSESTCVAGLLGGPLFPEFTAQSPGGA--RGSPAGARATW-PGDAQ :. .:.. :.: .:.:: : :. : gi|119 PRKDSLLKPGLRAVVGGAAAVSTQAMHNGSPKSSASQAGAAAGQGAPAPAPASQEPLPIA 430 440 450 460 470 480 100 110 120 130 140 FLJ002 GASVAA--RPLGWVRQEGTFAPRR----GGRLRGPGRAAGTRRYRPALGNAECCPGRRRG : ..: :::: ... ..: : :. .: . ::: : . . . . : gi|119 GPATAPAPRPLGSIQRPNSFLFRSSSQSGSGPSSPDSVLRPRRY-PQVPDEKDLMTQLRQ 490 500 510 520 530 540 150 160 170 180 190 200 FLJ002 GARARRRRP--RDQAFRRARTRASPGAPERTPPGSWGHPHGTGEGLGRSRGGTATGGLHA ..: .:: .: : : .. : : : . .. . . : .... gi|119 VLESRLQRPLPEDLAEALASGVILCQLANQLRPRSVPFIHVPSPAVPKLSALKARKNVES 550 560 570 580 590 600 210 220 230 240 250 260 FLJ002 FTTRSTEAS-PLSLLEIGSLGLPCTRHPWAPGEGAWGRCGCSLSPCPSSPQPPSRSPSWI : . . : . : : : : . . : : : . : : : : . . . gi|119 FLEACRKMGVPEADLCSPSDLLQGTARGLRTALEAVKRVGGKALP-PLWP-PSGLGGFVV 610 620 630 640 650 660 270 280 290 300 310 320 FLJ002 WREQLLLPHHLPGPATEQPPGAPDPRSPQVAWEVAPSRMTPLAPWDPKYEAKAGPRPVW- . :.: .. :::::::::::::::::::::::::::::::::::: gi|119 FYVVLMLLLYVTYTRLL------DPRSPQVAWEVAPSRMTPLAPWDPKYEAKAGPRPVWV 670 680 690 700 710 330 340 350 360 370 FLJ002 --GANCSSGASFSGRT-------LC--HPSFWPLYEAASGRGLRPVAPATGHWNGQQAPP : .:..: . .: . :: :: . . ... : :.: .:. : : gi|119 SWGQTCGTGWGAQGAVRWPEAPVLCPPHPRGPTVAQEPRSQAGRCVTPHSGRCMKQ---P 720 730 740 750 760 770 380 390 400 410 420 430 FLJ002 DAGFPVVCCEDVFLSDPL-LPRGQRVPLYLSKAPQQMMGSLKLLPPPPIMSARVLPRPSP :: .: : ::.: . :. :: :.:: . :.:.: :. gi|119 RAG----------VSGPWPLPQGTGMD---SRRPQ-MQGSRWC--AVKMSSSRTLCCPGG 780 790 800 810 440 450 460 470 480 490 FLJ002 SRGPSTAWLSGPELIALTGLLQMSQGEPRPSSSAVGPPDHTSDPPSPCGSPSSSQGADLS : : : gi|119 SVFPCTCPRPPSR 820 830 >>gi|109495430|ref|XP_213736.3| PREDICTED: hypothetical (254 aa) initn: 349 init1: 185 opt: 285 Z-score: 255.8 bits: 55.9 E(): 1.5e-05 Smith-Waterman score: 419; 40.385% identity (53.077% similar) in 260 aa overlap (303-501:1-254) 280 290 300 310 320 FLJ002 HHLPGPATEQPPGAPDPRSPQVAWEVAPSRMTP-LAPWDP-KYEAKAGPRPVWGANC--- : : :.:: . :: : :.. gi|109 MLPWLGPWGTGQEEATEGLDLSTGSDQGEA 10 20 30 330 340 350 360 370 FLJ002 -SSG--------ASFSGRTLCHPSFWPLYEAASGRGLRPVAPATGHWNGQQ-APPDAGFP ::: . . ::::::: ::.:. : :. ..:: . .: : .:.: gi|109 WSSGEETMEKQQTPVQDRTLCHPS-WPMYD---DWGRMPT--TSGHPEEKQVASRGTGLP 40 50 60 70 80 380 390 400 410 FLJ002 VVCCEDVFLSDPLLPRGQRVPLYLSKAPQQM---------------------------MG : :.::: :::: :::::::: : :::. :: gi|109 VRNSEEVFLLDPLLSPGQRVPLYLPKPPQQVRMSLPTFSLPFSIQSQWDKLPFPSSQAMG 90 100 110 120 130 140 420 430 440 450 FLJ002 SLKLLPPPPIMSARVLPRPS---P----SRGPST-----AWLSGPELIALTGLLQMSQGE ::::: ::::::. : : : : .: ::. .::: :.:::.::::::::: gi|109 SLKLLLPPPIMSSSVQPSSSQGCPFSSQARPPSSQARPPTWLSEAEMIALAGLLQMSQGE 150 160 170 180 190 200 460 470 480 490 500 FLJ002 PRPSS------SAVGP-PDHTSDPPSPCGSPSSSQGADLSLPQTPDTHCP :.: :: : : ..:. :.: :. : : ..: :.::.: : gi|109 QTPDSQASSLPSASCPDPAYVSEDPGPNGGQSCSGSTDPRPTQNPDNHRP 210 220 230 240 250 >>gi|114643600|ref|XP_001151718.1| PREDICTED: hypothetic (594 aa) initn: 274 init1: 88 opt: 266 Z-score: 235.4 bits: 53.3 E(): 0.00021 Smith-Waterman score: 306; 25.630% identity (42.017% similar) in 476 aa overlap (42-496:53-474) 20 30 40 50 60 70 FLJ002 GLAASGVEGLGGRTAGVAGVVSAAINRSQKPSGWPSGVTVSESTCVAGLLG-GPLFPEFT : : : : . . : :: : gi|114 VSQEESPSLIAGNPQGPPPQGGNQPQGPPPPPGKPEGPPPQGDKSRRGNQPQGPPPPPGK 30 40 50 60 70 80 80 90 100 110 120 FLJ002 AQSPGGARGSPAGARATWPGDAQGASVAARPLGWVRQEGTFAPRRGGRLRGPGRAAGT-- ..: . .::. :: :: : : . .: : :. .:: .:. gi|114 PEGPPPQGDKSRSARSP-PGKPQGPP----PQGGNQPQGPPPP--PGKPQGPPPQGGSKS 90 100 110 120 130 130 140 150 160 170 180 FLJ002 RRYRPALGNAECCPGRRRGGAR--------ARRRRPRDQAFRRARTRASPGAPERTPPGS : : :. . : .:: . .. . : :. . .:. :: :. :: . gi|114 RSARSPPGKPQGPPP--QGGNQPQGPPPPPGKPQGPPPQGDKSRSARSPPGKPQGPPPQG 140 150 160 170 180 190 190 200 210 220 230 240 FLJ002 WGHPHGTGEGLGRSRGGTATGGLHAFTTRSTEASPLSLLEIGSLGLPCTRHPWAPGEGAW ..:.: :. .: : .::... : : : . : : .: gi|114 GNQPQGPPPPPGKPQGPPPQGD----KSRSARSPP---------GKP--QGP--PPQG-- 200 210 220 230 250 260 270 280 290 FLJ002 GRCGCSLSPCPSSPQ--PPSRSPSWIWREQLLLPHHLPGPATEQPPGAPDP----RSPQV : . : :..:. ::. . : : :. : . .:::: : : ..: gi|114 GNQPQGPPPPPGKPEGPPPQGDKSRSARSPPGKPQGPPPQGGNQPPGPPPPPGKPEGPPP 240 250 260 270 280 290 300 310 320 330 340 350 FLJ002 AWEVAPSRMTPLAPWDPKYEAKAGPRPVWGANCSSGASFSGRTLCHPSFWPLYEAASGRG . . : .: : : :: : :.: :. : :. : : .: : gi|114 QGDKSRRGNQPQGP-PPPPEKPQGPAPQGGSNSRSARSPPGKPQGPP---P-----QG-G 300 310 320 330 340 360 370 380 390 400 410 FLJ002 LRPVAPATGHWNGQQAPPDAGFPVVCCEDVFLSDPLLPRGQRVPLYLSKAPQQMMGSLKL .: .: . :.:: : : :. : : ..: . :. gi|114 NQPQGPPPPP-EKPQGPPPQG------------DK--SRSARSPPGKPQGPPPQGGNQPQ 350 360 370 380 420 430 440 450 460 470 FLJ002 LPPPPIMSARVLPRPSPSRGPSTAWLSG-PELIALTGLLQMSQGEPRPSSSAVGPP---D :::: . . : . : . :. : :. : : :: : : . ::: : gi|114 GPPPPPGKPQGPPPQGGSNSRSARSPPGKPQGPPPQGGNQ-PQGPPPPPEKPQGPPPQGD 390 400 410 420 430 440 480 490 500 FLJ002 HTSDPPSPCGSPSSSQGADLSLPQTPDTHCP .. .: :: :.:.. . :: : gi|114 KSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGSKSRSARSPPGKPQGPPPQ 450 460 470 480 490 500 >>gi|115725094|ref|XP_799837.2| PREDICTED: hypothetical (2055 aa) initn: 175 init1: 80 opt: 265 Z-score: 228.2 bits: 53.8 E(): 0.00052 Smith-Waterman score: 329; 28.226% identity (48.992% similar) in 496 aa overlap (15-491:1428-1868) 10 20 30 40 FLJ002 GWPGPGHPWPAGLAASGVEGLGGRT-AGVAGVVSAAINRSQKPS :.::::. : :: .: .::: . : gi|115 GDGSDSSEEAYDYDGSDGAEGADGTEGADGADGVEGVDGADGAGEGGGTSAA-GVPGTAS 1400 1410 1420 1430 1440 1450 50 60 70 80 90 100 FLJ002 GWPS---GVTVSESTCVAGLLGGPLFPEFTAQSPGGARGSPAGARATWPGDAQGASVAAR : :: :: :... :: :..::::: .:. :: :. .::. :.: gi|115 GVPSTRGGVGVARAP------GG-------ARAPGGAR-APSRPRA--PSPPSGAAGASR 1460 1470 1480 1490 1500 110 120 130 140 150 FLJ002 PLGW--VRQEGTFAPRRGGRLRGPGRAAGTRRYRPALGNAECCPGRRRGGARARRRRPRD : . . :.::: .:: .: . ::. .. :. :.:: : : gi|115 PRAPPPAAAPGSFAP-------SPGYSAPAGGRRPSAPSVPYAPS----GGRALPRAPGG 1510 1520 1530 1540 160 170 180 190 200 210 FLJ002 QAFRRARTRASPGAPERTPPGSWGHPHGTGEGLGR-SRGGTATGGL--HAF--TTRSTEA : : ::: .: :. : :.. : : :.: .: : .:. . : . gi|115 TP-GGAPGYAPAGAPGYAPVGAPVAP-GVATGTGTCSEGVSADYGCTEEALYDPNNSGDQ 1550 1560 1570 1580 1590 1600 220 230 240 250 260 FLJ002 SPLSLLEIGSLGLPCTRHPWAPGEGAWGRCGC-SLSPCPS-SP-QPPSRSPS--WIWREQ . . ..:. : : . :. .:: : . .: :. :: ::.:.:. . gi|115 DTRDSCDLGTPGAACG----SDGQ-SWGAGGTPARAPAPGHSPGYPPARAPTPGHPGYQP 1610 1620 1630 1640 1650 1660 270 280 290 300 310 320 FLJ002 LLLPHHLPGPATEQPPGAPDPRSPQVAWEVAPSRMTPLAPWDPKYEAKAGPRPVWGANCS : : ::. . :: .: .: .: ::. .: :: .: .: : . . gi|115 PRAPAPGPYPAAPHAPGPQQPYAP-IAPANAPG--VPYAPGNPP----NAPPPYYPQAPQ 1670 1680 1690 1700 1710 330 340 350 360 370 380 FLJ002 SGASFSGRTLCHPSFWPLYEAASGRGLRPVAPATGHWNGQQAPPDAGFPVVCCEDVFLSD . .. . ::. : .: : :. : :..: : .. ::: : .: gi|115 APPPYQPNAPSPPSYAP--NAPSMPGFAPGPPGAGVPFGPDGN-DAG----GSSDQQSAD 1720 1730 1740 1750 1760 390 400 410 420 430 440 FLJ002 PL-LPRGQRVPLYLSKAPQQMMGSLKLLPPPPIMSARVLPRPSPSRGPSTAWLSGPELIA : ::. : . .:: . .. . : : . : . :::. .:. : ..: . gi|115 PAPAPRAPAPP--MPRAPTFVPAAPRPAAPRPPVYAPAAPRPA---APAPAAPAAPA-VP 1770 1780 1790 1800 1810 1820 450 460 470 480 490 500 FLJ002 LTGLLQMSQGEPRPSSSAVGPPDHTSDPPSPCGSPSS--SQGADLSLPQTPDTHCP : . . :: ....: .. .. . : : :.:.: : gi|115 GTRFAPAAPGEGGDGGDGVDVGEYDGEAGADYGHYESEGSSGSDESSGSSEEYYDYGSGG 1830 1840 1850 1860 1870 1880 gi|115 IDGGDGADGADGGDGAGGAGGGDGGDGADGVGGVGAGTGAAGGRGGLPRAPSRPGTPRAQ 1890 1900 1910 1920 1930 1940 501 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Sat Feb 28 01:11:19 2009 done: Sat Feb 28 01:18:19 2009 Total Scan time: 941.060 Total Display time: 0.100 Function used was FASTA [version 34.26.5 April 26, 2007]