# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj06421.fasta.huge -Q ../query/FLJ00339.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00339, 472 aa
vs ./tmplib.10216 library
2210522 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 5.0018+/-0.00379; mu= 12.0616+/- 0.256
mean_var=90.2713+/-20.165, 0's: 0 Z-trim: 2 B-trim: 0 in 0/40
Lambda= 0.134989
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
FLJ00157 ( 474 res) sh06561 ( 474) 1444 291.5 1e-79
FLJ00161 ( 596 res) sh06688 ( 596) 568 121.0 2.6e-28
KIAA1937 ( 704 res) fk04595 ( 704) 91 28.2 2.7
KIAA1794 ( 802 res) fj08520 ( 802) 90 28.0 3.4
KIAA0959 ( 820 res) hj05718 ( 820) 89 27.8 3.9
KIAA0879 ( 461 res) hk07371 ( 461) 86 27.0 4
KIAA0516 ( 1382 res) hg00484s2 (1382) 90 28.3 4.9
FLJ00185 ( 824 res) sj01856 ( 824) 87 27.5 5.2
KIAA0003 ( 524 res) hk04939 ( 524) 84 26.7 5.7
KIAA0266 ( 766 res) ha02755 ( 766) 85 27.0 6.5
KIAA0278 ( 460 res) ha06634 ( 460) 80 25.8 9
KIAA1188 ( 339 res) hg02860a ( 339) 78 25.3 9.6
KIAA0477 ( 1148 res) hh00492 (1148) 84 27.0 9.7
KIAA0604 ( 773 res) hg02198b ( 773) 82 26.5 9.8
KIAA0411 ( 1061 res) hg02120 (1061) 82 26.6 12
KIAA2018 ( 1685 res) ha04734 (1685) 84 27.2 13
KIAA0969 ( 1091 res) hj06525 (1091) 81 26.4 14
KIAA1457 ( 1359 res) fh16161s1 (1359) 82 26.7 14
FLJ00311 ( 249 res) sh06450 ( 249) 73 24.2 15
KIAA0454 ( 2296 res) bf02274 (2296) 84 27.4 16
KIAA0075 ( 174 res) ha01209 ( 174) 71 23.6 16
KIAA0320 ( 1933 res) bg00151 (1933) 83 27.1 16
KIAA0218 ( 777 res) ha02987 ( 777) 78 25.7 17
KIAA1488 ( 852 res) fj07893 ( 852) 77 25.5 20
KIAA1134 ( 611 res) hj00883 ( 611) 75 25.0 21
FLJ00025 ( 955 res) as00025 ( 955) 77 25.6 22
KIAA0956 ( 672 res) hj05590 ( 672) 75 25.0 23
KIAA0869 ( 888 res) hk06927 ( 888) 76 25.3 24
KIAA0461 ( 1355 res) hg00867 (1355) 78 25.9 24
KIAA0164 ( 929 res) ha02373 ( 929) 76 25.4 25
KIAA1129 ( 625 res) hg04330 ( 625) 74 24.8 25
KIAA1545 ( 968 res) fj14026s1 ( 968) 76 25.4 25
KIAA1632 ( 1457 res) fh19068(revised) (1457) 78 26.0 26
KIAA0942 ( 537 res) hh04979s1 ( 537) 73 24.5 26
KIAA1674 ( 538 res) fg03838 ( 538) 73 24.5 26
KIAA0336 ( 1635 res) hg01120 (1635) 78 26.0 28
KIAA0485 ( 83 res) hg00837 ( 83) 63 21.7 28
KIAA0513 ( 412 res) hf00293 ( 412) 71 24.0 28
KIAA0272 ( 759 res) ha06802s1 ( 759) 74 24.9 28
KIAA0036 ( 632 res) ha02085 ( 632) 73 24.6 29
KIAA0757 ( 534 res) hk04606 ( 534) 72 24.3 29
KIAA0129 ( 442 res) ha00496 ( 442) 71 24.0 29
KIAA1930 ( 664 res) fj11193 ( 664) 73 24.6 30
KIAA0215 ( 857 res) ha02776 ( 857) 74 24.9 31
KIAA0906 ( 923 res) hk10347 ( 923) 74 25.0 32
KIAA1702 ( 530 res) fj15966 ( 530) 71 24.1 33
KIAA1379 ( 457 res) fj05092s1 ( 457) 70 23.9 34
KIAA1749 ( 1047 res) pj02119y1 (1047) 74 25.0 35
KIAA0793 ( 1055 res) hk05692 (1055) 74 25.0 35
KIAA0586 ( 1576 res) hj01033 (1576) 76 25.6 35
>>FLJ00157 ( 474 res) sh06561 (474 aa)
initn: 1423 init1: 1423 opt: 1444 Z-score: 1524.7 bits: 291.5 E(): 1e-79
Smith-Waterman score: 1775; 70.136% identity (71.493% similar) in 442 aa overlap (1-442:144-468)
10 20 30
FLJ003 LIEQGALLQAHRKLMDLECSRDGLMYEQYR
::::::::::::::::::::::::::::::
FLJ001 AVVQHSQLAAAVENLKNIFSVPEIVRETQDLIEQGALLQAHRKLMDLECSRDGLMYEQYR
120 130 140 150 160 170
40 50 60 70 80 90
FLJ003 MDSGNTRDMTLIHGYFGSTQGLSDELAKQLWMVLQRSLVTVRRDPTLLVSVVRIIEREEK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
FLJ001 MDSGNTRDMTLIHGYFGSTQGLSDELAKQLWMVLQRSLVTVRRDPTLLVSVVRIIEREEK
180 190 200 210 220 230
100 110 120 130 140 150
FLJ003 IDRRILDRKKQTGFVPPGRPKNWKEKMFTILERTVTTRIEGTQADTRESDKMWLVRHLEI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
FLJ001 IDRRILDRKKQTGFVPPGRPKNWKEKMFTILERTVTTRIEGTQADTRESDKMWLVRHLEI
240 250 260 270 280 290
160 170 180 190 200 210
FLJ003 IRKYVLDDLIVAKNLMVQCFPPHYEIFKNLLNMYHQALSTRMQDLASEDLEANEIVSLLT
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
FLJ001 IRKYVLDDLIVAKNLMVQCFPPHYEIFKNLLNMYHQALSTRMQDLASEDLEANEIVSLLT
300 310 320 330 340 350
220 230 240 250 260 270
FLJ003 WVLNTYTSTEMMRNVELAPEVDVGTLEPLLSPHVVSELLDTYMSTLTSNIIAWLRKALET
:::::::
FLJ001 WVLNTYT-----------------------------------------------------
360
280 290 300 310 320 330
FLJ003 DKKDWVKETEPEADQDGYYQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLCLQQMNSF
FLJ001 ------------------------------------------------------------
340 350 360 370 380 390
FLJ003 LSRYKDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKESIVSLKRKYLKNEVEEGVS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
FLJ001 --RYKDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKESIVSLKRKYLKNEVEEGVS
370 380 390 400 410
400 410 420 430 440 450
FLJ003 PSQPSMDGILDAIAKEGCSGLLEEVFLDLEQHLNELMTKKWLLGSNAVDIICVTVEDYFN
:::::::::::::::::::::::::::::: : ... .:: ..: :
FLJ001 PSQPSMDGILDAIAKEGCSGLLEEVFLDLEVGLA--LSSCRFLGRSTVLPHCPLGHRL
420 430 440 450 460 470
460 470
FLJ003 DFAKIKKPYKKVRRWDLVPSSS
>>FLJ00161 ( 596 res) sh06688 (596 aa)
initn: 535 init1: 425 opt: 568 Z-score: 601.5 bits: 121.0 E(): 2.6e-28
Smith-Waterman score: 595; 27.949% identity (62.051% similar) in 390 aa overlap (72-458:64-430)
50 60 70 80 90 100
FLJ003 IHGYFGSTQGLSDELAKQLWMVLQRSLVTVRRDPTLLVSVVRIIEREEKIDRRILDRKKQ
:.::.:::..::. : : :
FLJ001 ELPFFQGLDLLFEALGQAVEAAAGAAGKLAREDPALLVAAVRVAEVE-------TGRTTP
40 50 60 70 80
110 120 130 140 150 160
FLJ003 TGFVPPGRPKNWKEKMFTILERTVTTRIEGTQADTRESD-KMWLVRHLEIIRKYVLDDLI
: :: ..:... . :.. . :. . :: : .: . .:
FLJ001 LGQVP----RDWRQRCLRALQEGLEQAHFGSPLLPAPGALPGWL----EALRVALPVELA
90 100 110 120 130
170 180 190 200 210
FLJ003 VAKNLMVQCFPPHYEIFKNLLNMYHQALSTRMQDL-ASEDLEANEIVSLLTWVLNTYTST
.:. :.. : ::.:.. . . :..: .:.: :. .::: . .:: :.:..: .
FLJ001 TAEALVAPCCPPQYNVVQLWAHTLHSGLRRSLQNLLAGPELEAADAFALLHWALHVYLGQ
140 150 160 170 180 190
220 230 240 250 260 270
FLJ003 EMMRNVELAPEVDVGTLEPLLSPHVVSELLDTYMSTLTSNIIAWLRKALETDKKDWVKET
::: ..::.::.::. :::::. . . .: :..... ... ::..::. . .: .:
FLJ001 EMMGSLELGPEADVSQLEPLLTLENIEQLEATFVANIQASVSQWLQNALDGEVAEWGREH
200 210 220 230 240 250
280 290 300 310 320 330
FLJ003 EPEADQDGYYQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLCLQQMNSFLSRYKDEAQ
:..: .: : . .::::.:..:.:..::. .::.:. .: . :.....:: ..:
FLJ001 GPNTDPSGSYYSPMPAIVLQILEENIRVASLVSESLQQRVHGMALSELGTFLRSFSDALI
260 270 280 290 300 310
340 350 360 370 380 390
FLJ003 LYKEEHLRNRQH-PHCYVQYMIAIINNCQTFKESIVSLKRKYLKNEVEEGVSPSQPSMDG
....:.:... :: :: :..: .:. ... :. :. : . ...: . ..:
FLJ001 RFSRDHFRGKSMAPH-YVPYLLAALNHKSALGSSVSVLQ---LDGAPSGALAPVEAALDE
320 330 340 350 360 370
400 410 420 430 440 450
FLJ003 ILDAIAKEGCSGLLEEVFLDLEQHLNELMTKKWLLGSNAVDIICVTVEDYFNDFAKIKKP
. : . .:: . .:. . .: ...:: . . .. .: . . :: ....:
FLJ001 LQRRIYRL----VLEALQAELQPLFADLPSRQWLSSPELLQSVCERTGRFCRDFWRVRNP
380 390 400 410 420 430
460 470
FLJ003 YKKVRRWDLVPSSS
FLJ001 TVQLLLAEAERAVVLQYLSALMQGRLVCRGADERTQAAERLRHDAAQLQQLFLSLGLEEN
440 450 460 470 480 490
>>KIAA1937 ( 704 res) fk04595 (704 aa)
initn: 63 init1: 39 opt: 91 Z-score: 98.6 bits: 28.2 E(): 2.7
Smith-Waterman score: 91; 19.277% identity (52.610% similar) in 249 aa overlap (118-353:182-419)
90 100 110 120 130 140
FLJ003 EEKIDRRILDRKKQTGFVPPGRPKNWKEKMFTILERTVTTRI-EGTQADTRESDKMWLVR
....:.: :. :. .:.. .
KIAA19 DLENRLTKQKEELELKEQKEDVLNNKLSDALAMVEETQKTKATESLKAESLALKLNETLA
160 170 180 190 200 210
150 160 170 180 190 200
FLJ003 HLEIIR-KYVL-DDLIVAKNLMVQCFPPHYEI----FKNLLNMYHQALSTRMQDLASEDL
.:: . :... .. .. .. ::. . . : : . . :.. .. . : ..: .
KIAA19 ELETTKTKMIMVEERLILQQKMVKALQDEQESQRHGFGEEIMEYKEQIKQHAQTIVSLEE
220 230 240 250 260 270
210 220 230 240 250 260
FLJ003 EANEIVSLLTWVLNTYTSTEMMRNVELAPEVDVGTLEPLLSPHVVSELLDTYMSTLTSNI
. ..... . . .. ... . ::. . .::..: . : : . : ...
KIAA19 KLQKVTQHHKKIEGEIAT---LKDNDPAPKEERPQ-DPLVAPMTESSAKDMAYEHLIDDL
280 290 300 310 320
270 280 290 300 310
FLJ003 IAWLRKALETD------KKDWVKETEPEADQDGYYQTTLPAIVFQMFEQNLQVAAQISED
.: .. : . .:: .. .: : . . .:::. .. : :..
KIAA19 LAAQKEILSQQEVIMKLRKDLTEAHSRMSDLRGELNEKQK----MELEQNVVLVQQQSKE
330 340 350 360 370 380
320 330 340 350 360 370
FLJ003 LKTKVLVLCLQQMNSFLSRYKDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKESIV
: .:: . ::.:.. . ::. :: :: :. :
KIAA19 L--SVLKEKMAQMSSLVEK-KDRELKALEEALRASQEKHRLQLNTEKEQKPRKKTQTCDT
390 400 410 420 430 440
380 390 400 410 420 430
FLJ003 SLKRKYLKNEVEEGVSPSQPSMDGILDAIAKEGCSGLLEEVFLDLEQHLNELMTKKWLLG
KIAA19 SVQIEPVHTEAFSSSQEQQSFSDLGVRCKGSRHEEVIQRQKKALSELRARIKELEKARSP
450 460 470 480 490 500
>>KIAA1794 ( 802 res) fj08520 (802 aa)
initn: 42 init1: 42 opt: 90 Z-score: 96.8 bits: 28.0 E(): 3.4
Smith-Waterman score: 90; 22.131% identity (59.836% similar) in 122 aa overlap (298-418:84-198)
270 280 290 300 310 320
FLJ003 LETDKKDWVKETEPEADQDGYYQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLCLQQM
......: :.: .. . : .. : .
KIAA17 NETFCLEIMDSLRRCLSQQADVRLMLYEGFYDVLRRNSQLANSVMQTLLSQ-LKQFYEPK
60 70 80 90 100 110
330 340 350 360 370 380
FLJ003 NSFLSRYKDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQT-FKESIVSLKRKYLKNEVE
..: : :: . . . :.: ..:.. :..: . .:.... :.. ..: :
KIAA17 PDLLPPLKLEACILTQGDKISLQEP---LDYLLCCIQHCLAWYKNTVIPLQQGEEEEEEE
120 130 140 150 160
390 400 410 420 430 440
FLJ003 EGVSPSQPSMDGILDAIAKEGCSGLLEEVFLDLEQHLNELMTKKWLLGSNAVDIICVTVE
:. ..: ::..:... .. ::. ::
KIAA17 EAF---YEDLDDILESITNRMIKSELEDFELDKSADFSQSTSIGIKNNISAFLVMGVCEV
170 180 190 200 210 220
450 460 470
FLJ003 DYFNDFAKIKKPYKKVRRWDLVPSSS
KIAA17 LIEYNFSISSFSKNRFEDILSLFMCYKKLSDILNEKAGKAKTKMANKTSDSLLSMKFVSS
230 240 250 260 270 280
>>KIAA0959 ( 820 res) hj05718 (820 aa)
initn: 81 init1: 49 opt: 89 Z-score: 95.7 bits: 27.8 E(): 3.9
Smith-Waterman score: 89; 24.545% identity (57.273% similar) in 110 aa overlap (231-333:121-229)
210 220 230 240 250
FLJ003 EANEIVSLLTWVLNTYTSTEMMRNVELAPEVDVGTLEPLLSPHVVSELLD---TYMSTLT
. .:::: :. .... . : ::.: .
KIAA09 NKGARWLGVEGDQLPPGHTVSQYETCKIRTIKAGTLEKLVE-NLLTAFGDNDFTYISIFL
100 110 120 130 140
260 270 280 290 300 310
FLJ003 SNI--IAWLRKALETDKKDWVKETEPEADQDGYYQTTLPAIVFQMFEQNLQVA--AQISE
:. .: ...:: . . : :. ..:: ... .:.. .. : : .:
KIAA09 STYRGFASTKEVLELLLDRYGNLTSPNCEEDGSQSSSESKMVIRNAIASILRAWLDQCAE
150 160 170 180 190 200
320 330 340 350 360 370
FLJ003 DLKTKVLVLCLQQMNSFLSRYKDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKESI
:.. :::.. ..:.:
KIAA09 DFREPPHFPCLQKLLDYLTRMMPGSDPERRAQNLLEQFQKQEVETDNGLPNTISFSLEEE
210 220 230 240 250 260
>>KIAA0879 ( 461 res) hk07371 (461 aa)
initn: 46 init1: 46 opt: 86 Z-score: 95.5 bits: 27.0 E(): 4
Smith-Waterman score: 86; 21.023% identity (51.705% similar) in 176 aa overlap (123-288:35-203)
100 110 120 130 140 150
FLJ003 RRILDRKKQTGFVPPGRPKNWKEKMFTILERTVTTRIEGTQADTRESDKMWLVRHLE-II
. . . ..: .:: : . ::. .:
KIAA08 NVFIMKLLVILLFSGLITGFRSDSSSSLPPKLLLVSFDGFRADYL---KNYEFPHLQNFI
10 20 30 40 50 60
160 170 180 190 200 210
FLJ003 RKYVLDDLIVAKNLMV-QCFPPHYEIFKNLLNMYHQALSTRMQDLASEDLEANEIVSLLT
.. :: . . ::... . :: :: : .: . : ... : : ... .. .
KIAA08 KEGVLVEHV--KNVFITKTFPNHYSIVTGLYEESHGIVANSMYDAVTKKHFSDSNDKDPF
70 80 90 100 110
220 230 240 250 260
FLJ003 W---VLNTYTSTEMMRNVELAPEVDVGTLEPLLSPHVVSELLDTYMSTLT-----SNIIA
: .. ........: : . :: :. . ..: . .: :... .::
KIAA08 WWNEAVPIWVTNQLQENRSSAAAMWPGTDVPIHD--TISSYFMNYNSSVSFEERLNNITM
120 130 140 150 160 170
270 280 290 300 310 320
FLJ003 WLRKALETDKKDWVKETEPEADQDGYYQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVL
:: .. . ::.:. :
KIAA08 WLNNSNPPVTFATLYWEEPDASGHKYGPEDKENMSRVLKKIDDLIGDLVQRLKMLGLWEN
180 190 200 210 220 230
>>KIAA0516 ( 1382 res) hg00484s2 (1382 aa)
initn: 65 init1: 42 opt: 90 Z-score: 94.0 bits: 28.3 E(): 4.9
Smith-Waterman score: 90; 24.219% identity (57.031% similar) in 128 aa overlap (302-421:175-300)
280 290 300 310 320 330
FLJ003 KKDWVKETEPEADQDGYYQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLCLQQMNSFL
...::. .. : . .:. : : ... . .
KIAA05 QLITQYEREKALRKHAEEKFIEFEDSQEQEKKDLQTRVE-SLESQTRQLELKAKNYADQI
150 160 170 180 190 200
340 350 360 370 380
FLJ003 SRYKD-EAQLYKEE---HLRNRQHPHCYVQYMIAIINNCQTFKESIVSLKRKYLKNE--V
:: .. ::.: :: : :. . : :.... . . .... : .. ...: .
KIAA05 SRLEEREAELKKEYNALHQRHTEMIHNYMEHLERTKLHQLSGSDQLESTAHSRIRKERPI
210 220 230 240 250 260
390 400 410 420 430 440
FLJ003 EEGVSPSQPSMDGILDAIAKEG--CSGLLEEVFLDLEQHLNELMTKKWLLGSNAVDIICV
:. : :. ::.: :..: : . : .: :
KIAA05 SLGIFP-LPAGDGLLTPDAQKGGETPGSEQWKFQELSQPRSHTSLKVSNSPEPQKAVEQE
270 280 290 300 310 320
450 460 470
FLJ003 TVEDYFNDFAKIKKPYKKVRRWDLVPSSS
KIAA05 DELSDVSQGGSKATTPASTANSDVATIPTDTPLKEENEGFVKVTDAPNKSEISKHIEVQV
330 340 350 360 370 380
>>FLJ00185 ( 824 res) sj01856 (824 aa)
initn: 52 init1: 52 opt: 87 Z-score: 93.5 bits: 27.5 E(): 5.2
Smith-Waterman score: 87; 25.581% identity (50.388% similar) in 129 aa overlap (231-353:116-238)
210 220 230 240 250 260
FLJ003 EANEIVSLLTWVLNTYTSTEMMRNVELAPEVDVGTLEPLLSPHVVSELLDTYMSTLTSNI
: .:::: :. :.: . . .: .: :
FLJ001 LHHGGNKGQRWLGYENESALNLYETCKVRTVKAGTLEKLVE-HLVPAFQGSDLSYVT--I
90 100 110 120 130 140
270 280 290 300 310
FLJ003 IAWLRKALETDKK--DWVKETE----PEADQDGYYQTTLPAIVFQMFEQNLQVAAQISED
. .:. : .. : . . : .:.:: : : . ... :. : :::
FLJ001 FLCTYRAFTTTQQVLDLLFKRYGCILPYSDEDGGPQDQLKNAISSILGTWLD---QYSED
150 160 170 180 190
320 330 340 350 360 370
FLJ003 LKTKVLVLCLQQMNSFLSRYKDEAQLYKEEHLRNRQHPHCYVQYMIAIINNCQTFKESIV
. ::.:. .... ..: .. :: : :
FLJ001 FCQPPDFPCLKQLVAYVQLNMPGSDLERRAHLLLAQLEHSEPIEAEPEALSPVPALKPTP
200 210 220 230 240 250
380 390 400 410 420 430
FLJ003 SLKRKYLKNEVEEGVSPSQPSMDGILDAIAKEGCSGLLEEVFLDLEQHLNELMTKKWLLG
FLJ001 ELELALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPAPAPELQQAPEPAVGLESAPAP
260 270 280 290 300 310
>>KIAA0003 ( 524 res) hk04939 (524 aa)
initn: 39 init1: 39 opt: 84 Z-score: 92.8 bits: 26.7 E(): 5.7
Smith-Waterman score: 85; 22.754% identity (52.695% similar) in 167 aa overlap (238-387:98-261)
210 220 230 240 250 260
FLJ003 LLTWVLNTYTSTEMMRNVELAPEVDVGTLEPLLSPHVVSELLDTYMSTLTSNIIAWLRKA
: . : :. :. .. . : ::.:
KIAA00 AYTFILPEHDGNCRESTTDQYNTNALQRDAPHVEPDFSSQKLQ-HLEHVMENYTQWLQK-
70 80 90 100 110 120
270 280 290 300 310 320
FLJ003 LETDKKDWVKETEPEADQDGY--YQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLV----
::. . .: . .:.. . .:. : ... :. . . ... :..:.::
KIAA00 LENYIVENMKSEMAQIQQNAVQNHTATMLEIGTSLLSQTAEQTRKLT-DVETQVLNQTSR
130 140 150 160 170 180
330 340 350 360 370
FLJ003 LCLQQMNSFLSRYKDEAQLYKEE------HLRNRQHPHCYVQYMIAIINNCQTFKESIVS
: .: ... :: :: : :: .. : .: : ... .. .:.:: .
KIAA00 LEIQLLENSLSTYKLEKQLLQQTNEILKIHEKNSLLEHKILEMEGKHKEELDTLKEEKEN
190 200 210 220 230 240
380 390 400 410 420 430
FLJ003 L-----KRKYLKNEVEEGVSPSQPSMDGILDAIAKEGCSGLLEEVFLDLEQHLNELMTKK
: .. :. .:.:.
KIAA00 LQGLVTRQTYIIQELEKQLNRATTNNSVLQKQQLELMDTVHNLVNLCTKEGVLLKGGKRE
250 260 270 280 290 300
>>KIAA0266 ( 766 res) ha02755 (766 aa)
initn: 66 init1: 41 opt: 85 Z-score: 91.8 bits: 27.0 E(): 6.5
Smith-Waterman score: 85; 25.843% identity (57.303% similar) in 89 aa overlap (195-282:311-392)
170 180 190 200 210 220
FLJ003 LMVQCFPPHYEIFKNLLNMYHQALSTRMQDLASEDLEANEIVSLLTWVLNTYTSTEMMRN
.:. :::: . .. . .. :. ..
KIAA02 EMEKIENARMMERMSLKHQNSGKWAKSKAIMAKYDLEARQ--AMQEQLAKNKELTQKLQV
290 300 310 320 330
230 240 250 260 270 280
FLJ003 VELAPEVDVGT-LEPLLSPHVVSELLDTYMSTLTSNIIAWLRKALETDKKDWVKETEPEA
. . : . :: .: :: :::..:. :.. : :. .. .: :. . . .::
KIAA02 ASESEEEEGGTEVEELLVPHVANEV---QMNVDGPN--PWMFRSCTSDTKEAATQEDPEQ
340 350 360 370 380 390
290 300 310 320 330 340
FLJ003 DQDGYYQTTLPAIVFQMFEQNLQVAAQISEDLKTKVLVLCLQQMNSFLSRYKDEAQLYKE
KIAA02 VPELAAHEVSASEAEERPVAEEEILLREFEERQSLRKRSELNQDAEPASSQETKDSSSQE
400 410 420 430 440 450
472 residues in 1 query sequences
2210522 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 10:51:58 2009 done: Fri Feb 27 10:51:59 2009
Total Scan time: 0.550 Total Display time: 0.090
Function used was FASTA [version 34.26.5 April 26, 2007]