# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj06355.fasta.nr -Q ../query/FLJ00227.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00227, 196 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7822875 sequences
Expectation_n fit: rho(ln(x))= 5.9019+/-0.000199; mu= 5.9590+/- 0.011
mean_var=113.4524+/-21.667, 0's: 37 Z-trim: 41 B-trim: 264 in 1/65
Lambda= 0.120411
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|18676656|dbj|BAB84980.1| FLJ00227 protein [Homo ( 196) 1363 246.4 2e-63
gi|21756849|dbj|BAC04970.1| unnamed protein produc ( 255) 1084 198.0 9.5e-49
gi|119628167|gb|EAX07762.1| synaptotagmin-like 1, ( 360) 1084 198.2 1.2e-48
gi|119628165|gb|EAX07760.1| synaptotagmin-like 1, ( 386) 623 118.1 1.6e-24
gi|55961177|emb|CAI14782.1| synaptotagmin-like 1 [ ( 291) 615 116.6 3.5e-24
gi|108999988|ref|XP_001110913.1| PREDICTED: synapt ( 562) 287 59.9 7.9e-07
gi|16041767|gb|AAH15764.1| SYTL1 protein [Homo sap ( 457) 282 59.0 1.3e-06
gi|109000000|ref|XP_001110835.1| PREDICTED: synapt ( 497) 279 58.5 1.9e-06
gi|108999991|ref|XP_001110879.1| PREDICTED: synapt ( 550) 279 58.5 2.1e-06
gi|40226501|gb|AAH09224.2| SYTL1 protein [Homo sap ( 471) 277 58.1 2.3e-06
gi|14585869|gb|AAK67636.1| hypothetical protein SB ( 562) 277 58.2 2.7e-06
gi|158259537|dbj|BAF85727.1| unnamed protein produ ( 562) 277 58.2 2.7e-06
gi|119628164|gb|EAX07759.1| synaptotagmin-like 1, ( 562) 277 58.2 2.7e-06
gi|33301659|sp|Q8IYJ3.1|SYTL1_HUMAN RecName: Full= ( 562) 277 58.2 2.7e-06
gi|114555007|ref|XP_513243.2| PREDICTED: hypotheti ( 562) 273 57.5 4.3e-06
gi|194207838|ref|XP_001500660.2| PREDICTED: synapt ( 556) 260 55.2 2e-05
gi|14042915|dbj|BAB55444.1| unnamed protein produc ( 550) 256 54.5 3.3e-05
gi|119628166|gb|EAX07761.1| synaptotagmin-like 1, ( 550) 256 54.5 3.3e-05
gi|73950531|ref|XP_544472.2| PREDICTED: similar to ( 575) 233 50.5 0.00054
gi|148698127|gb|EDL30074.1| synaptotagmin-like 1, ( 330) 213 46.8 0.004
gi|13542850|gb|AAH05623.1| Sytl1 protein [Mus musc ( 308) 212 46.6 0.0043
gi|12957165|dbj|BAB32651.1| synaptotagmin-like pro ( 567) 213 47.1 0.0059
gi|148698128|gb|EDL30075.1| synaptotagmin-like 1, ( 567) 213 47.1 0.0059
gi|33301666|sp|Q99N80.2|SYTL1_MOUSE RecName: Full= ( 567) 212 46.9 0.0067
gi|123121742|emb|CAM21069.1| synaptotagmin-like 1 ( 503) 211 46.7 0.0069
gi|123121741|emb|CAM21068.1| synaptotagmin-like 1 ( 568) 211 46.7 0.0075
gi|47847480|dbj|BAD21412.1| mFLJ00227 protein [Mus ( 590) 211 46.7 0.0078
>>gi|18676656|dbj|BAB84980.1| FLJ00227 protein [Homo sap (196 aa)
initn: 1363 init1: 1363 opt: 1363 Z-score: 1294.8 bits: 246.4 E(): 2e-63
Smith-Waterman score: 1363; 100.000% identity (100.000% similar) in 196 aa overlap (1-196:1-196)
10 20 30 40 50 60
FLJ002 RLQILRRRPRPRKILAKETNRSVPRRLTRSWSPRRGESRSRGPSQAQVGGSGPWLLSTSG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 RLQILRRRPRPRKILAKETNRSVPRRLTRSWSPRRGESRSRGPSQAQVGGSGPWLLSTSG
10 20 30 40 50 60
70 80 90 100 110 120
FLJ002 ADSGRGALLPRAASRPRPRALGAGVGKEGAPRHLPPLQTKAASQILENGEEAPGPDPSLD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 ADSGRGALLPRAASRPRPRALGAGVGKEGAPRHLPPLQTKAASQILENGEEAPGPDPSLD
70 80 90 100 110 120
130 140 150 160 170 180
FLJ002 RMLSSSSSVSSLNSSTVRREGGDPGGRGVDPFRCVAPACPSLAAGPTAAAPQPATYDPGL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 RMLSSSSSVSSLNSSTVRREGGDPGGRGVDPFRCVAPACPSLAAGPTAAAPQPATYDPGL
130 140 150 160 170 180
190
FLJ002 KPPRCPRPRREPCERP
::::::::::::::::
gi|186 KPPRCPRPRREPCERP
190
>>gi|21756849|dbj|BAC04970.1| unnamed protein product [H (255 aa)
initn: 1076 init1: 1076 opt: 1084 Z-score: 1031.4 bits: 198.0 E(): 9.5e-49
Smith-Waterman score: 1084; 96.894% identity (98.758% similar) in 161 aa overlap (36-196:96-255)
10 20 30 40 50 60
FLJ002 RRRPRPRKILAKETNRSVPRRLTRSWSPRRGESRSRGPSQAQVGGSGPWLLSTSGADSGR
::.. : :.:::::::::::::::::::::
gi|217 EASQAQEDPGQGDQQVCAEEADPELEPASGGEQEPR-PQQAQVGGSGPWLLSTSGADSGR
70 80 90 100 110 120
70 80 90 100 110 120
FLJ002 GALLPRAASRPRPRALGAGVGKEGAPRHLPPLQTKAASQILENGEEAPGPDPSLDRMLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 GALLPRAASRPRPRALGAGVGKEGAPRHLPPLQTKAASQILENGEEAPGPDPSLDRMLSS
130 140 150 160 170 180
130 140 150 160 170 180
FLJ002 SSSVSSLNSSTVRREGGDPGGRGVDPFRCVAPACPSLAAGPTAAAPQPATYDPGLKPPRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|217 SSSVSSLNSSTVRREGGDPGGRGVDPFRCVAPACPSLAAGPTAAAPQPATYDPGLKPPRC
190 200 210 220 230 240
190
FLJ002 PRPRREPCERP
:::::::::::
gi|217 PRPRREPCERP
250
>>gi|119628167|gb|EAX07762.1| synaptotagmin-like 1, isof (360 aa)
initn: 1076 init1: 1076 opt: 1084 Z-score: 1029.5 bits: 198.2 E(): 1.2e-48
Smith-Waterman score: 1084; 96.894% identity (98.758% similar) in 161 aa overlap (36-196:201-360)
10 20 30 40 50 60
FLJ002 RRRPRPRKILAKETNRSVPRRLTRSWSPRRGESRSRGPSQAQVGGSGPWLLSTSGADSGR
::.. : :.:::::::::::::::::::::
gi|119 EASQAQEDPGQGDQQVCAEEADPELEPASGGEQEPR-PQQAQVGGSGPWLLSTSGADSGR
180 190 200 210 220
70 80 90 100 110 120
FLJ002 GALLPRAASRPRPRALGAGVGKEGAPRHLPPLQTKAASQILENGEEAPGPDPSLDRMLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GALLPRAASRPRPRALGAGVGKEGAPRHLPPLQTKAASQILENGEEAPGPDPSLDRMLSS
230 240 250 260 270 280
130 140 150 160 170 180
FLJ002 SSSVSSLNSSTVRREGGDPGGRGVDPFRCVAPACPSLAAGPTAAAPQPATYDPGLKPPRC
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 SSSVSSLNSSTVRREGGDPGGRGVDPFRCVAPACPSLAAGPTAAAPQPATYDPGLKPPRC
290 300 310 320 330 340
190
FLJ002 PRPRREPCERP
:::::::::::
gi|119 PRPRREPCERP
350 360
>>gi|119628165|gb|EAX07760.1| synaptotagmin-like 1, isof (386 aa)
initn: 615 init1: 615 opt: 623 Z-score: 596.3 bits: 118.1 E(): 1.6e-24
Smith-Waterman score: 623; 94.118% identity (98.039% similar) in 102 aa overlap (36-137:233-333)
10 20 30 40 50 60
FLJ002 RRRPRPRKILAKETNRSVPRRLTRSWSPRRGESRSRGPSQAQVGGSGPWLLSTSGADSGR
::.. : :.:::::::::::::::::::::
gi|119 EASQAQEDPGQGDQQVCAEEADPELEPASGGEQEPR-PQQAQVGGSGPWLLSTSGADSGR
210 220 230 240 250 260
70 80 90 100 110 120
FLJ002 GALLPRAASRPRPRALGAGVGKEGAPRHLPPLQTKAASQILENGEEAPGPDPSLDRMLSS
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 GALLPRAASRPRPRALGAGVGKEGAPRHLPPLQTKAASQILENGEEAPGPDPSLDRMLSS
270 280 290 300 310 320
130 140 150 160 170 180
FLJ002 SSSVSSLNSSTVRREGGDPGGRGVDPFRCVAPACPSLAAGPTAAAPQPATYDPGLKPPRC
:::::::::::.
gi|119 SSSVSSLNSSTLSGSQMSLSGDAEAVQVRGSVHFALHYEPGAAELRVHVIQCQGLAAARR
330 340 350 360 370 380
>>gi|55961177|emb|CAI14782.1| synaptotagmin-like 1 [Homo (291 aa)
initn: 615 init1: 615 opt: 615 Z-score: 590.4 bits: 116.6 E(): 3.5e-24
Smith-Waterman score: 615; 97.895% identity (100.000% similar) in 95 aa overlap (43-137:3-97)
20 30 40 50 60 70
FLJ002 KILAKETNRSVPRRLTRSWSPRRGESRSRGPSQAQVGGSGPWLLSTSGADSGRGALLPRA
:.::::::::::::::::::::::::::::
gi|559 PRPQQAQVGGSGPWLLSTSGADSGRGALLPRA
10 20 30
80 90 100 110 120 130
FLJ002 ASRPRPRALGAGVGKEGAPRHLPPLQTKAASQILENGEEAPGPDPSLDRMLSSSSSVSSL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|559 ASRPRPRALGAGVGKEGAPRHLPPLQTKAASQILENGEEAPGPDPSLDRMLSSSSSVSSL
40 50 60 70 80 90
140 150 160 170 180 190
FLJ002 NSSTVRREGGDPGGRGVDPFRCVAPACPSLAAGPTAAAPQPATYDPGLKPPRCPRPRREP
::::.
gi|559 NSSTLSGSQMSLSGDAEAVQVRGSVHFALHYEPGAAELRVHVIQCQGLAAARRRRSDPYV
100 110 120 130 140 150
>>gi|108999988|ref|XP_001110913.1| PREDICTED: synaptotag (562 aa)
initn: 240 init1: 240 opt: 287 Z-score: 278.8 bits: 59.9 E(): 7.9e-07
Smith-Waterman score: 287; 48.800% identity (65.600% similar) in 125 aa overlap (17-137:129-250)
10 20 30 40
FLJ002 RLQILRRRPRPRKILAKETNRSVPRRLTRSWSPRRGESRSRGPS--
:: ... ::: . .:.. ... :.
gi|108 SDLVRASMRRKKSARGDQAPSSDGEAEAAVKEKEEGPEPRLTIDEAPQERLRETEEPDFP
100 110 120 130 140 150
50 60 70 80 90 100
FLJ002 --QAQVGGSGPWLLSTSGADSGRGALLPRAASRPRPRALGAGVGKEGAPRHLPPLQTKAA
.. . :: : : . : :.: :: : . :. :. : . :: : ::::
gi|108 SPSVPLKGSDPEEASQAQEDPGQGDLLV-CAEKADPELEPASRGGQ-EPRP-PQAQTKAE
160 170 180 190 200 210
110 120 130 140 150 160
FLJ002 SQILENGEEAPGPDPSLDRMLSSSSSVSSLNSSTVRREGGDPGGRGVDPFRCVAPACPSL
::::::::::::::::::::::::::::::::::.
gi|108 SQILENGEEAPGPDPSLDRMLSSSSSVSSLNSSTLSGSQMSLSGEAEAVQVRGSVHFALH
220 230 240 250 260 270
170 180 190
FLJ002 AAGPTAAAPQPATYDPGLKPPRCPRPRREPCERP
gi|108 YEPGASELRVHVIQCQGLAAARRRRSDPYVKSYLLPDKQSKRKTAVKKRNLNPVFNETLR
280 290 300 310 320 330
>>gi|16041767|gb|AAH15764.1| SYTL1 protein [Homo sapiens (457 aa)
initn: 264 init1: 239 opt: 282 Z-score: 275.2 bits: 59.0 E(): 1.3e-06
Smith-Waterman score: 282; 46.970% identity (63.636% similar) in 132 aa overlap (10-137:17-145)
10 20 30 40
FLJ002 RLQILRRRPRPRKILAKETNRSVPRRLTRSWSPRRGESRSRGPS----QAQVG
: . .:: ... ::: . .:.. ...::. .: .
gi|160 MRRKKSTRGDQAPGHDREAEAAVKEKEEGPEPRLTIDEAPQERLRETEGPDFPSPSAPLK
10 20 30 40 50 60
50 60 70 80 90 100
FLJ002 GSGPWLLSTSGADSGRGALLPRAASRPRPRALGAGVGKEGAPRHLPPLQTKAASQILENG
.: : : . : :.: : . :. : . : : :: ::::::::::::
gi|160 ASDPEEASQAQEDPGQGDQ-QVCAEEADPE-LEPASGGEQEPRP-QQAQTKAASQILENG
70 80 90 100 110
110 120 130 140 150 160
FLJ002 EEAPGPDPSLDRMLSSSSSVSSLNSSTVRREGGDPGGRGVDPFRCVAPACPSLAAGPTAA
:::::::::::::::::::::::::::.
gi|160 EEAPGPDPSLDRMLSSSSSVSSLNSSTLSGSQMSLSGDAEAVQVRGSVHFALHYEPGAAE
120 130 140 150 160 170
>>gi|109000000|ref|XP_001110835.1| PREDICTED: synaptotag (497 aa)
initn: 240 init1: 240 opt: 279 Z-score: 271.9 bits: 58.5 E(): 1.9e-06
Smith-Waterman score: 279; 61.364% identity (69.318% similar) in 88 aa overlap (50-137:154-238)
20 30 40 50 60 70
FLJ002 NRSVPRRLTRSWSPRRGESRSRGPSQAQVGGSGPWLLSTSGADSGRGALLPRAASRPRPR
:: : : . : :.: :: : . :.
gi|109 AEAAVKEKEEGPEPRLTIDEAPQERLRETEGSDPEEASQAQEDPGQGDLLV-CAEKADPE
130 140 150 160 170 180
80 90 100 110 120 130
FLJ002 ALGAGVGKEGAPRHLPPLQTKAASQILENGEEAPGPDPSLDRMLSSSSSVSSLNSSTVRR
:. : . :: : :::: ::::::::::::::::::::::::::::::::::.
gi|109 LEPASRGGQ-EPRP-PQAQTKAESQILENGEEAPGPDPSLDRMLSSSSSVSSLNSSTLSG
190 200 210 220 230 240
140 150 160 170 180 190
FLJ002 EGGDPGGRGVDPFRCVAPACPSLAAGPTAAAPQPATYDPGLKPPRCPRPRREPCERP
gi|109 SQMSLSGEAEAVQVRGSVHFALHYEPGASELRVHVIQCQGLAAARRRRSDPYVKSYLLPD
250 260 270 280 290 300
>>gi|108999991|ref|XP_001110879.1| PREDICTED: synaptotag (550 aa)
initn: 240 init1: 240 opt: 279 Z-score: 271.4 bits: 58.5 E(): 2.1e-06
Smith-Waterman score: 279; 61.364% identity (69.318% similar) in 88 aa overlap (50-137:154-238)
20 30 40 50 60 70
FLJ002 NRSVPRRLTRSWSPRRGESRSRGPSQAQVGGSGPWLLSTSGADSGRGALLPRAASRPRPR
:: : : . : :.: :: : . :.
gi|108 AEAAVKEKEEGPEPRLTIDEAPQERLRETEGSDPEEASQAQEDPGQGDLLV-CAEKADPE
130 140 150 160 170 180
80 90 100 110 120 130
FLJ002 ALGAGVGKEGAPRHLPPLQTKAASQILENGEEAPGPDPSLDRMLSSSSSVSSLNSSTVRR
:. : . :: : :::: ::::::::::::::::::::::::::::::::::.
gi|108 LEPASRGGQ-EPRP-PQAQTKAESQILENGEEAPGPDPSLDRMLSSSSSVSSLNSSTLSG
190 200 210 220 230 240
140 150 160 170 180 190
FLJ002 EGGDPGGRGVDPFRCVAPACPSLAAGPTAAAPQPATYDPGLKPPRCPRPRREPCERP
gi|108 SQMSLSGEAEAVQVRGSVHFALHYEPGASELRVHVIQCQGLAAARRRRSDPYVKSYLLPD
250 260 270 280 290 300
>>gi|40226501|gb|AAH09224.2| SYTL1 protein [Homo sapiens (471 aa)
initn: 264 init1: 239 opt: 277 Z-score: 270.4 bits: 58.1 E(): 2.3e-06
Smith-Waterman score: 277; 46.212% identity (63.636% similar) in 132 aa overlap (10-137:31-159)
10 20 30
FLJ002 RLQILRRRPRPRKILAKETNRSVPRRLTRSWSPRRGESR
: . .:: ... ::: . .:.. .
gi|402 HHNAHFGSDLVRASMRRKKSTRGDQAPGHDREAEAAVKEKEEGPEPRLTIDEAPQERLRE
10 20 30 40 50 60
40 50 60 70 80 90
FLJ002 SRGPS----QAQVGGSGPWLLSTSGADSGRGALLPRAASRPRPRALGAGVGKEGAPRHLP
..::. .. . .: : : . : :.: : . :. : . : : ::
gi|402 TEGPDFPSPSVPLKASDPEEASQAQEDPGQGDQ-QVCAEEADPE-LEPASGGEQEPRP-Q
70 80 90 100 110
100 110 120 130 140 150
FLJ002 PLQTKAASQILENGEEAPGPDPSLDRMLSSSSSVSSLNSSTVRREGGDPGGRGVDPFRCV
:::::::::::::::::::::::::::::::::::::::.
gi|402 QAQTKAASQILENGEEAPGPDPSLDRMLSSSSSVSSLNSSTLSGSQMSLSGDAEAVQVRG
120 130 140 150 160 170
160 170 180 190
FLJ002 APACPSLAAGPTAAAPQPATYDPGLKPPRCPRPRREPCERP
gi|402 SVHFALHYEPGAAELRVHVIQCQGLAAARRRRSDPYVKSYLLPDKQSKRKTAVKKRNLNP
180 190 200 210 220 230
196 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 22:39:10 2009 done: Fri Feb 27 22:43:49 2009
Total Scan time: 664.040 Total Display time: 0.020
Function used was FASTA [version 34.26.5 April 26, 2007]