# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj05835.fasta.huge -Q ../query/FLJ00337.ptfa ./tmplib.10216 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00337, 288 aa
vs ./tmplib.10216 library
2210706 residues in 2457 sequences
Expectation_n fit: rho(ln(x))= 3.9393+/-0.00401; mu= 20.5200+/- 0.272
mean_var=91.5584+/-19.816, 0's: 0 Z-trim: 0 B-trim: 0 in 0/40
Lambda= 0.134037
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 36, opt: 24, open/ext: -10/-2, width: 16
The best scores are: opt bits E(2457)
KIAA1440 ( 1377 res) hg02441b (1377) 97 28.7 2.2
KIAA0689 ( 547 res) hk03417 ( 547) 91 26.9 3
KIAA1760 ( 2219 res) af00030 (2219) 96 28.8 3.3
KIAA1050 ( 829 res) hh03308 ( 829) 87 26.4 6.5
KIAA0212 ( 666 res) ha02602 ( 666) 86 26.1 6.6
KIAA1062 ( 1771 res) hj03579s1 (1771) 89 27.3 7.4
KIAA1384 ( 652 res) fj06146 ( 652) 84 25.7 8.5
FLJ00042 ( 452 res) as00042 ( 452) 81 24.9 10
FLJ00416 ( 221 res) sj04686 ( 221) 78 23.8 11
KIAA1443 ( 573 res) hj01820b ( 573) 81 25.0 12
FLJ00417 ( 600 res) sj06336 ( 600) 81 25.1 12
FLJ00222 ( 656 res) sj06165 ( 656) 81 25.1 13
KIAA1707 ( 756 res) fj17662 ( 756) 81 25.2 14
KIAA1187 ( 813 res) fk03027 ( 813) 81 25.3 14
FLJ00414 ( 1129 res) sg00016 (1129) 81 25.5 17
KIAA0450 ( 1182 res) hj05822 (1182) 81 25.5 17
KIAA1446 ( 645 res) fg06734 ( 645) 78 24.5 19
FLJ00263 ( 764 res) sj01530 ( 764) 78 24.6 21
KIAA1297 ( 2242 res) fg03883 (2242) 82 26.1 21
KIAA1299 ( 730 res) fg04370 ( 730) 77 24.4 23
FLJ00220 ( 503 res) sj05828 ( 503) 75 23.8 25
FLJ00397 ( 150 res) sj06436 ( 150) 70 22.0 25
KIAA1972 ( 576 res) fk09334 ( 576) 75 23.9 27
FLJ00294 ( 681 res) sh03769 ( 681) 75 24.0 29
KIAA1783 ( 1560 res) fg01285 (1560) 78 25.1 30
KIAA0384 ( 967 res) hh00733 ( 967) 76 24.4 30
KIAA1629 ( 1329 res) fh20517 (1329) 77 24.8 32
KIAA0812 ( 1364 res) hg01044 (1364) 77 24.8 32
KIAA1555 ( 2414 res) fh17482s2 (2414) 79 25.6 33
KIAA1845 ( 705 res) fg05317(revised) ( 705) 74 23.8 34
KIAA1853 ( 708 res) hj04155 ( 708) 74 23.8 34
KIAA1100 ( 444 res) hk07907 ( 444) 72 23.1 34
KIAA1887 ( 967 res) fk02232 ( 967) 75 24.2 35
KIAA0199 ( 1283 res) ha03150s1 (1283) 76 24.6 35
KIAA0746 ( 1029 res) hk04140 (1029) 75 24.3 36
KIAA1459 ( 853 res) fh16961 ( 853) 74 23.9 37
KIAA1236 ( 1840 res) pg00641 (1840) 77 25.0 37
FLJ00214 ( 322 res) sj05155 ( 322) 70 22.5 38
KIAA0583 ( 1952 res) af01829 (1952) 77 25.1 39
KIAA0377 ( 1412 res) hh00412 (1412) 75 24.5 42
KIAA0312 ( 3192 res) ff01724 (3192) 78 25.6 44
KIAA0860 ( 551 res) hk06518 ( 551) 71 23.1 44
KIAA1394 ( 1003 res) hj07546 (1003) 73 23.9 46
KIAA0375 ( 1540 res) hh00360s1 (1540) 74 24.3 51
KIAA0458 ( 1552 res) ef01252 (1552) 74 24.3 51
KIAA1854 ( 572 res) fg02232 ( 572) 70 22.9 51
KIAA0144 ( 983 res) ha03843 ( 983) 72 23.6 52
KIAA0200 ( 1042 res) ha02508 (1042) 72 23.7 54
KIAA1357 ( 836 res) fj01906 ( 836) 71 23.3 55
KIAA1282 ( 1117 res) hh04440b(revised) (1117) 72 23.7 56
>>KIAA1440 ( 1377 res) hg02441b (1377 aa)
initn: 74 init1: 47 opt: 97 Z-score: 100.2 bits: 28.7 E(): 2.2
Smith-Waterman score: 97; 27.586% identity (54.310% similar) in 116 aa overlap (127-235:720-829)
100 110 120 130 140 150
FLJ003 TANSKTEAKQQAALSALCYIRSQLENPESPQTSSRPPLAPLSVENIL-THEQRCAALVSA
: : .: : ..... .. . :..:
KIAA14 RLAEALAFRQDLEVVSSTVRAVIATLRSGEQCSVEPDLISKVLQGLIEVRSPHLEELLTA
690 700 710 720 730 740
160 170 180 190 200 210
FLJ003 GFDLLLDERSPYWACKGTV--AGVILEREIPRARGHVKE---IYKLVALGTGSSCCAGWL
:. : ::. ::: .: ....:..: : : :. . : :: .:. . ::
KIAA14 FFSATADAASPFPACKPVVVVSSLLLQEEEPLAGGKPGADGGSLEAVRLGPSSGLLVDWL
750 760 770 780 790 800
220 230 240 250 260
FLJ003 E-FSGQQLHDCHGLVIARRALLRFLFRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPR
: .. . . .: : ::.::
KIAA14 EMLDPEVVSSCPDL------QLRLLFSRRKGKGQAQVPSFRPYLLTLFTHQSSWPTLHQC
810 820 830 840 850 860
>>KIAA0689 ( 547 res) hk03417 (547 aa)
initn: 70 init1: 70 opt: 91 Z-score: 97.7 bits: 26.9 E(): 3
Smith-Waterman score: 91; 31.373% identity (58.824% similar) in 51 aa overlap (231-281:119-169)
210 220 230 240 250 260
FLJ003 TGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLATQGGPKGKEQSVLAPQPGP
:..: :.. .. :.. :: .: :::
KIAA06 ARNMLLQNPQLAYALLQAQVVMRIMDPEIALKILHRKIHVTPLIPGKSQSVSVSGPGPGP
90 100 110 120 130 140
270 280
FLJ003 GPPFTLKPRVFLHLYISNTPKGAARDIY
:: . : :.:. .:.
KIAA06 GPGLCPGPNVLLNQQNPPAPQPQHLARRPVKDIPPLMQTPIQGGIPAPGPIPAAVPGAGP
150 160 170 180 190 200
>>KIAA1760 ( 2219 res) af00030 (2219 aa)
initn: 96 init1: 66 opt: 96 Z-score: 97.2 bits: 28.8 E(): 3.3
Smith-Waterman score: 96; 42.553% identity (57.447% similar) in 47 aa overlap (226-272:29-72)
200 210 220 230 240 250
FLJ003 LVALGTGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFLFRQLLLATQGGPKGKEQSVLA
:: . ::: :... . : : : : :
KIAA17 GRRDVPGTLMEPGRGAGPAGMAEPRAKAARPGPQRFLRRSVVESDQEEPPGLEA---A
10 20 30 40 50
260 270 280
FLJ003 PQPGPGPPFTLKPRVFLHLYISNTPKGAARDIY
::: :: :. ::.:
KIAA17 EAPGPQPPQPLQRRVLLLCKTRRLIAERARGRPAAPAPAALVAQPGAPGAPADAGPEPVG
60 70 80 90 100 110
>>KIAA1050 ( 829 res) hh03308 (829 aa)
initn: 41 init1: 41 opt: 87 Z-score: 91.8 bits: 26.4 E(): 6.5
Smith-Waterman score: 87; 30.882% identity (57.353% similar) in 68 aa overlap (94-158:235-299)
70 80 90 100 110 120
FLJ003 CEMESRIPAVEELGPCFPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYIRSQLENP
: ::. .... : .:... ::: :
KIAA10 VNSNRNTHRSLSGCPIAAAEKLAKSHEKQQPQTGDPSKSSSNSDRILRPMCFVK-QLEVP
210 220 230 240 250 260
130 140 150 160 170 180
FLJ003 ESPQTSSRPPLAPLSVENILTHEQRCAALVS---AGFDLLLDERSPYWACKGTVAGVILE
: : :: .:: . . :..: . . :. :.::
KIAA10 --PYGSYRPNVAPATPRANLAKELEKFSKVTFDYASFDAQVFGKRMLAPKIQTSETSPKA
270 280 290 300 310 320
190 200 210 220 230 240
FLJ003 REIPRARGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFLFRQLLL
KIAA10 FQCFDYSQDAEAAHMAATAILNLSTRCWEMPENLSTKPQDLPSKSVDIEVDENGTLDLSM
330 340 350 360 370 380
>>KIAA0212 ( 666 res) ha02602 (666 aa)
initn: 84 init1: 61 opt: 86 Z-score: 91.7 bits: 26.1 E(): 6.6
Smith-Waterman score: 86; 30.769% identity (57.143% similar) in 91 aa overlap (19-105:7-94)
10 20 30 40 50
FLJ003 YCFIGKVFKYRAPGGEELKAMCLWQVEVLRAFLLRTGWRG-LWRGDLDLGPDSSWANRLP
.: :.. :: ::: : .: :: . :::. .. .:.:
KIAA02 NNARGARATMQWRALVLGLVLLRLGLHGVLWLV-FGLGPSMGFYQRFP
10 20 30 40
60 70 80 90 100 110
FLJ003 FLL-ICEMES-RIPAVEELGPC-FPFSVSAELDGVVCPAGTANSKTEAKQQAALSALCYI
. . . ...: :: :: : .::. . . : ::. ... :
KIAA02 LSFGFQRLRSPDGPASPTSGPVGRPGGVSG--PSWLQPPGTGAAQSPRKAPRRPGPGMCG
50 60 70 80 90 100
120 130 140 150 160 170
FLJ003 RSQLENPESPQTSSRPPLAPLSVENILTHEQRCAALVSAGFDLLLDERSPYWACKGTVAG
KIAA02 PANWGYVLGGRGRGPDEYEKRYSGAFPPQLRAQMRDLARGMFVFGYDNYMAHAFPQDELN
110 120 130 140 150 160
>>KIAA1062 ( 1771 res) hj03579s1 (1771 aa)
initn: 75 init1: 52 opt: 89 Z-score: 90.8 bits: 27.3 E(): 7.4
Smith-Waterman score: 89; 29.167% identity (52.083% similar) in 96 aa overlap (192-282:751-838)
170 180 190 200 210 220
FLJ003 DERSPYWACKGTVAGVILEREIPRARGHVKEIYKLVALGTGSSCC-AGWLEFSGQQLHDC
: : .: :: .::: ....
KIAA10 EGAGYTDVYGDYRPLFDNPQDPDNVSLQEVEAEALSRVGQGSRKLDGGWL-----KVRQF
730 740 750 760 770
230 240 250 260 270
FLJ003 HGLVIAR----RALLRFLFRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHLYI
:::.. : : . :: :.:: . . .. .:. : ::..:.: . : :
KIAA10 HGLLVKRFHCARRNSKALFSQILLPAFFVCVAMTVALSVPEIGDLPPLVLSPSQY-HNYT
780 790 800 810 820 830
280
FLJ003 SNTPKGAARDIY
. :.:
KIAA10 Q--PRGNFIPYANEERREYRLRLSPDASPQQLVSTFRLPSGVGATCVLKSPANGSLGPTL
840 850 860 870 880 890
>>KIAA1384 ( 652 res) fj06146 (652 aa)
initn: 47 init1: 47 opt: 84 Z-score: 89.7 bits: 25.7 E(): 8.5
Smith-Waterman score: 84; 33.898% identity (50.847% similar) in 59 aa overlap (206-263:57-112)
180 190 200 210 220 230
FLJ003 GVILEREIPRARGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHDCHGLVIAR-RALLRFL
: : .:::.: :: :.: .: :
KIAA13 RSGDRTSTFDPSHSDNLLHGLNLLWRKQLFCDVTLTAQGQQFH-CHKAVLASCSQYFRSL
30 40 50 60 70 80
240 250 260 270 280
FLJ003 FRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKGAARDIY
: . :: : .... ::. ::
KIAA13 FSS--HPPLGGGVGGQDGLGAPKDQQQPPQQQPSQQQQPPPQEEPGTPSSSPDDKLLTSP
90 100 110 120 130 140
>>FLJ00042 ( 452 res) as00042 (452 aa)
initn: 84 init1: 54 opt: 81 Z-score: 88.0 bits: 24.9 E(): 10
Smith-Waterman score: 81; 26.984% identity (49.206% similar) in 126 aa overlap (12-135:184-298)
10 20 30 40
FLJ003 YCFIGKVFKYRAPGGEELKAMCLWQVEVLRAFLLRTGWRGL
::.: .. : : . . :: .:: : :
FLJ000 LLPPALFLWPGLGPSVGLDLPLLLSPSQAHAPAGSHVPAGSLTSQPGF-AFQIRTKWIPL
160 170 180 190 200 210
50 60 70 80 90
FLJ003 WRGDLDLGPDSSWANRLPFLLICEMESRIPAVEELGPCFPF-SVSAELDGVV-CPAGTAN
: :: :.:..:. . .: . . . .:. : :.. : : : .
FLJ000 VNGGTTQGP------RVPIILVGN-KSDLRSGSSMEAVLPIMSQFPEIETCVECSAKNLR
220 230 240 250 260
100 110 120 130 140 150
FLJ003 SKTEAKQQAALSALCYIRSQLENPESPQTSSRPPLAPLSVENILTHEQRCAALVSAGFDL
. .: : .:. . . : .::. : :: :
FLJ000 NISELFYYAQ-KAVLHPTAPLYDPEAKQL--RPACAQALTRIFRLSDQDLDQALSDEELN
270 280 290 300 310 320
160 170 180 190 200 210
FLJ003 LLDERSPYWACKGTVAGVILEREIPRARGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHD
FLJ000 AFQKSCFGHPLAPQALEDVKTVVCRNVAGGVREDRLTLDGEAGCPPVPGECGEGAVPGAP
330 340 350 360 370 380
>>FLJ00416 ( 221 res) sj04686 (221 aa)
initn: 77 init1: 77 opt: 78 Z-score: 87.8 bits: 23.8 E(): 11
Smith-Waterman score: 78; 52.381% identity (71.429% similar) in 21 aa overlap (253-273:32-52)
230 240 250 260 270 280
FLJ003 LVIARRALLRFLFRQLLLATQGGPKGKEQSVLAPQPGPGPPFTLKPRVFLHLYISNTPKG
: :: :.:.:: . ::: .:
FLJ004 GADPLTCSSVSPLLQREPPHTTVFPATMDDVPAPTPAPAPPAAAAPRVPFHCSECGKSFR
10 20 30 40 50 60
FLJ003 AARDIY
FLJ004 YRSDLRRHFARHTALKPHACPRCGKGFKHSFNLANHLRSHTGERPYRCSACPKGFRDSTG
70 80 90 100 110 120
>>KIAA1443 ( 573 res) hj01820b (573 aa)
initn: 43 init1: 43 opt: 81 Z-score: 87.1 bits: 25.0 E(): 12
Smith-Waterman score: 81; 28.169% identity (53.521% similar) in 71 aa overlap (205-268:134-199)
180 190 200 210 220 230
FLJ003 AGVILEREIPRARGHVKEIYKLVALGTGSSCCAGWLEFSGQQLHDCHGLVIARRALLRFL
: .: :...... .. :. :: :.
KIAA14 PSLADIALLCLRYGLQMEKVKTWFMAQRLRCGISW---SSEEIEETRARVVYRRDQLH--
110 120 130 140 150
240 250 260 270 280
FLJ003 FRQLLLATQGGPKGKEQSVLAPQPGP-------GPPFTLKPRVFLHLYISNTPKGAARDI
:..:: :. . . :. : :.: ::: ::
KIAA14 FKSLLSFTHHAGRPPEEVPPPPVPAPEQVGIGIGPPTLSKPTQTKGLKVEPEEPSQMPPL
160 170 180 190 200 210
FLJ003 Y
KIAA14 PQSHQKLKESLMTPGSGAFPYQSDFWQHLQSSGLSKEQAGRGPNQSHGIGTASWNHSTTV
220 230 240 250 260 270
288 residues in 1 query sequences
2210706 residues in 2457 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 10:51:57 2009 done: Fri Feb 27 10:51:57 2009
Total Scan time: 0.440 Total Display time: 0.050
Function used was FASTA [version 34.26.5 April 26, 2007]