# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/sj05828.fasta.nr -Q ../query/FLJ00220.ptfa /cdna2/lib/nr/nr 2
FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448
FLJ00220, 503 aa
vs /cdna2/lib/nr/nr library
2693465022 residues in 7827732 sequences
statistics sampled from 60000 to 7823750 sequences
Expectation_n fit: rho(ln(x))= 5.5867+/-0.000191; mu= 10.7990+/- 0.011
mean_var=96.8710+/-18.751, 0's: 36 Z-trim: 39 B-trim: 31 in 1/65
Lambda= 0.130310
FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2
join: 37, opt: 25, open/ext: -10/-2, width: 16
The best scores are: opt bits E(7827732)
gi|18676642|dbj|BAB84973.1| FLJ00220 protein [Homo ( 503) 3569 681.2 1.7e-193
gi|221039500|dbj|BAH11513.1| unnamed protein produ ( 881) 3020 578.2 3.1e-162
gi|37182970|gb|AAQ89285.1| chordin [Homo sapiens] ( 954) 3020 578.2 3.3e-162
gi|118572631|sp|Q9H2X0.2|CHRD_HUMAN RecName: Full= ( 955) 3020 578.2 3.3e-162
gi|11494125|gb|AAG35767.1|AF209928_1 chordin [Homo ( 955) 3016 577.5 5.5e-162
gi|114590802|ref|XP_516917.2| PREDICTED: chordin [ (1220) 2982 571.2 5.5e-160
gi|119598646|gb|EAW78240.1| chordin, isoform CRA_b ( 420) 2967 567.9 1.8e-159
gi|119598648|gb|EAW78242.1| chordin, isoform CRA_d ( 585) 2915 558.3 2e-156
gi|109042395|ref|XP_001097729.1| PREDICTED: chordi ( 955) 2890 553.8 7.4e-155
gi|74003395|ref|XP_849776.1| PREDICTED: similar to ( 959) 2764 530.1 1e-147
gi|194222655|ref|XP_001497324.2| PREDICTED: simila ( 883) 2747 526.9 8.7e-147
gi|194664138|ref|XP_001788489.1| PREDICTED: simila ( 941) 2694 516.9 9.1e-144
gi|74143669|dbj|BAE28881.1| unnamed protein produc ( 947) 2505 481.4 4.5e-133
gi|18203652|sp|Q9Z0E2.1|CHRD_MOUSE RecName: Full=C ( 948) 2505 481.4 4.5e-133
gi|148878196|gb|AAI45697.1| Chrd protein [Mus musc ( 970) 2505 481.4 4.6e-133
gi|149019881|gb|EDL78029.1| chordin [Rattus norveg ( 948) 2486 477.8 5.4e-132
gi|134047725|sp|Q63148.2|CHRD_RAT RecName: Full=Ch ( 951) 2486 477.8 5.4e-132
gi|221043230|dbj|BAH13292.1| unnamed protein produ ( 503) 2381 457.8 3e-126
gi|149616932|ref|XP_001518867.1| PREDICTED: simila (1007) 2224 428.6 3.8e-117
gi|3822218|gb|AAC69835.1| chordin [Homo sapiens] ( 801) 2179 420.0 1.1e-114
gi|221043126|dbj|BAH13240.1| unnamed protein produ ( 497) 2009 387.9 3.3e-105
gi|148665179|gb|EDK97595.1| chordin, isoform CRA_a ( 524) 1801 348.8 2e-93
gi|20988285|gb|AAH29879.1| Unknown (protein for IM ( 413) 1755 340.1 6.9e-91
gi|123234388|emb|CAM15359.1| chordin [Mus musculus ( 605) 1519 295.9 2.1e-77
gi|2826739|gb|AAC41250.1| chordin [Gallus gallus] ( 940) 1145 225.7 4.2e-56
gi|50414702|gb|AAH77767.1| LOC398045 protein [Xeno ( 940) 1101 217.4 1.3e-53
gi|2498235|sp|Q91713.1|CHRD_XENLA RecName: Full=Ch ( 941) 1101 217.4 1.3e-53
gi|46394860|gb|AAS91586.1| chordin [Oryctolagus cu ( 342) 1029 203.5 7.3e-50
gi|25140444|gb|AAN71745.1| chordin [Ovis aries] ( 153) 1006 198.9 8.2e-49
gi|190336827|gb|AAI62594.1| Chordin [Danio rerio] ( 940) 993 197.1 1.7e-47
gi|18202071|sp|O57472.1|CHRD_DANRE RecName: Full=C ( 940) 992 197.0 1.9e-47
gi|15077351|gb|AAK83138.1|AF304385_1 chordin [Halo ( 984) 873 174.6 1.1e-40
gi|210103493|gb|EEA51528.1| chordin protein [Branc ( 956) 744 150.3 2.1e-33
gi|198437080|ref|XP_002123306.1| PREDICTED: chordi (1018) 699 141.9 7.7e-31
gi|70569087|dbj|BAE06347.1| chordin [Ciona intesti ( 979) 694 140.9 1.4e-30
gi|1468951|dbj|BAA13128.1| chordin [Rattus norvegi ( 176) 662 134.3 2.7e-29
gi|60360286|dbj|BAD90387.1| mFLJ00220 protein [Mus ( 214) 651 132.3 1.3e-28
gi|90659978|gb|ABD97266.1| chordin [Saccoglossus k ( 925) 600 123.3 2.9e-25
gi|7839321|gb|AAF70237.1| chordin [Homo sapiens] ( 58) 490 101.5 6.4e-20
gi|47224811|emb|CAG06381.1| unnamed protein produc ( 935) 504 105.2 7.8e-20
gi|62087474|dbj|BAD92184.1| chordin isoform a vari ( 333) 446 93.9 7.1e-17
gi|197245672|gb|AAI68603.1| Unknown (protein for M ( 941) 440 93.2 3.3e-16
gi|156220619|gb|EDO41485.1| predicted protein [Nem ( 856) 387 83.2 3.1e-13
gi|86277764|gb|ABC88373.1| chordin [Nematostella v ( 859) 387 83.2 3.1e-13
gi|82706175|gb|ABB89472.1| chordin [Nematostella v ( 856) 383 82.4 5.2e-13
gi|193907562|gb|EDW06429.1| GI21514 [Drosophila mo (1066) 353 76.9 3e-11
gi|2498930|sp|Q24025.1|SOG_DROME RecName: Full=Dor (1038) 338 74.0 2.1e-10
gi|77403901|gb|ABA81829.1| LP20363p [Drosophila me (1038) 338 74.0 2.1e-10
gi|110294128|gb|ABG66525.1| chordin [Branchiostoma ( 984) 335 73.5 3e-10
gi|210083052|gb|EEA31689.1| hypothetical protein B ( 917) 331 72.7 4.8e-10
>>gi|18676642|dbj|BAB84973.1| FLJ00220 protein [Homo sap (503 aa)
initn: 3569 init1: 3569 opt: 3569 Z-score: 3629.9 bits: 681.2 E(): 1.7e-193
Smith-Waterman score: 3569; 100.000% identity (100.000% similar) in 503 aa overlap (1-503:1-503)
10 20 30 40 50 60
FLJ002 GEHLSQKGPHVRPCRTNPGSLEAPDSTPGAATARTSGQCLSPGEWGSGSRCHLSWPLAIA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 GEHLSQKGPHVRPCRTNPGSLEAPDSTPGAATARTSGQCLSPGEWGSGSRCHLSWPLAIA
10 20 30 40 50 60
70 80 90 100 110 120
FLJ002 HHTLLCPQEPGFAEVLPNLTVQEMDWLVLGELQMALEWAGRPGLRISGHIAARKSCDVLQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 HHTLLCPQEPGFAEVLPNLTVQEMDWLVLGELQMALEWAGRPGLRISGHIAARKSCDVLQ
70 80 90 100 110 120
130 140 150 160 170 180
FLJ002 SVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVVGTSSEVVAMTLETKPQRRDQRTV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 SVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVVGTSSEVVAMTLETKPQRRDQRTV
130 140 150 160 170 180
190 200 210 220 230 240
FLJ002 LCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLNVGTKDFPDGELRGHVAALPYCGH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 LCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLNVGTKDFPDGELRGHVAALPYCGH
190 200 210 220 230 240
250 260 270 280 290 300
FLJ002 SARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQGTVTAHLL
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 SARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQGTVTAHLL
250 260 270 280 290 300
310 320 330 340 350 360
FLJ002 GPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAKGMASLMITTKGSPRGELRGQVHI
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 GPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAKGMASLMITTKGSPRGELRGQVHI
310 320 330 340 350 360
370 380 390 400 410 420
FLJ002 ANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPGLPALAPAKPGGPGRPRDPNTCFF
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 ANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPGLPALAPAKPGGPGRPRDPNTCFF
370 380 390 400 410 420
430 440 450 460 470 480
FLJ002 EGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCPVCPEKQD
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|186 EGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCPVCPEKQD
430 440 450 460 470 480
490 500
FLJ002 VRDLPGLPRSRDPGEGGHWRGAL
:::::::::::::::::::::::
gi|186 VRDLPGLPRSRDPGEGGHWRGAL
490 500
>>gi|221039500|dbj|BAH11513.1| unnamed protein product [ (881 aa)
initn: 3149 init1: 3020 opt: 3020 Z-score: 3068.9 bits: 578.2 E(): 3.1e-162
Smith-Waterman score: 3020; 99.078% identity (99.539% similar) in 434 aa overlap (68-501:281-714)
40 50 60 70 80 90
FLJ002 QCLSPGEWGSGSRCHLSWPLAIAHHTLLCPQEPGFAEVLPNLTVQEMDWLVLGELQMALE
::::::::::::::::::::::::::::::
gi|221 RSGGLTQVPLRLQILHQGQLLRELQANVSAQEPGFAEVLPNLTVQEMDWLVLGELQMALE
260 270 280 290 300 310
100 110 120 130 140 150
FLJ002 WAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|221 WAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVV
320 330 340 350 360 370
160 170 180 190 200 210
FLJ002 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|221 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLN
380 390 400 410 420 430
220 230 240 250 260 270
FLJ002 VGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|221 VGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
440 450 460 470 480 490
280 290 300 310 320 330
FLJ002 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|221 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
500 510 520 530 540 550
340 350 360 370 380 390
FLJ002 GMASLMITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|221 GMASLMITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPG
560 570 580 590 600 610
400 410 420 430 440 450
FLJ002 LPALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|221 LPALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCP
620 630 640 650 660 670
460 470 480 490 500
FLJ002 PPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGGHWRGAL
::::::::::::::::::::::::::::::::::::::: .. :
gi|221 PPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGCYFDGDRSWRAAGTRWHPVVP
680 690 700 710 720 730
gi|221 PFGLIKCAVCTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQCPVGSGAHPQLGDPM
740 750 760 770 780 790
>>gi|37182970|gb|AAQ89285.1| chordin [Homo sapiens] (954 aa)
initn: 3149 init1: 3020 opt: 3020 Z-score: 3068.5 bits: 578.2 E(): 3.3e-162
Smith-Waterman score: 3020; 99.078% identity (99.539% similar) in 434 aa overlap (68-501:355-788)
40 50 60 70 80 90
FLJ002 QCLSPGEWGSGSRCHLSWPLAIAHHTLLCPQEPGFAEVLPNLTVQEMDWLVLGELQMALE
::::::::::::::::::::::::::::::
gi|371 RSGGLTQVPLRLQILHQGQLLRELQANVSAQEPGFAEVLPNLTVQEMDWLVLGELQMALE
330 340 350 360 370 380
100 110 120 130 140 150
FLJ002 WAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|371 WAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVV
390 400 410 420 430 440
160 170 180 190 200 210
FLJ002 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|371 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLN
450 460 470 480 490 500
220 230 240 250 260 270
FLJ002 VGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|371 VGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
510 520 530 540 550 560
280 290 300 310 320 330
FLJ002 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|371 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
570 580 590 600 610 620
340 350 360 370 380 390
FLJ002 GMASLMITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|371 GMASLMITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPG
630 640 650 660 670 680
400 410 420 430 440 450
FLJ002 LPALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|371 LPALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCP
690 700 710 720 730 740
460 470 480 490 500
FLJ002 PPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGGHWRGAL
::::::::::::::::::::::::::::::::::::::: .. :
gi|371 PPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGCYFDGDRSWRAAGTRWHPVVP
750 760 770 780 790 800
gi|371 PFGLIKCAVCTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQCPVGSGAHPQLGDPM
810 820 830 840 850 860
>>gi|118572631|sp|Q9H2X0.2|CHRD_HUMAN RecName: Full=Chor (955 aa)
initn: 3149 init1: 3020 opt: 3020 Z-score: 3068.5 bits: 578.2 E(): 3.3e-162
Smith-Waterman score: 3020; 99.078% identity (99.539% similar) in 434 aa overlap (68-501:355-788)
40 50 60 70 80 90
FLJ002 QCLSPGEWGSGSRCHLSWPLAIAHHTLLCPQEPGFAEVLPNLTVQEMDWLVLGELQMALE
::::::::::::::::::::::::::::::
gi|118 RSGGLTQVPLRLQILHQGQLLRELQANVSAQEPGFAEVLPNLTVQEMDWLVLGELQMALE
330 340 350 360 370 380
100 110 120 130 140 150
FLJ002 WAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 WAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVV
390 400 410 420 430 440
160 170 180 190 200 210
FLJ002 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLN
450 460 470 480 490 500
220 230 240 250 260 270
FLJ002 VGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 VGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
510 520 530 540 550 560
280 290 300 310 320 330
FLJ002 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
570 580 590 600 610 620
340 350 360 370 380 390
FLJ002 GMASLMITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 GMASLMITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPG
630 640 650 660 670 680
400 410 420 430 440 450
FLJ002 LPALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|118 LPALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCP
690 700 710 720 730 740
460 470 480 490 500
FLJ002 PPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGGHWRGAL
::::::::::::::::::::::::::::::::::::::: .. :
gi|118 PPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGCYFDGDRSWRAAGTRWHPVVP
750 760 770 780 790 800
gi|118 PFGLIKCAVCTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQCPVGSGAHPQLGDPM
810 820 830 840 850 860
>>gi|11494125|gb|AAG35767.1|AF209928_1 chordin [Homo sap (955 aa)
initn: 3145 init1: 3016 opt: 3016 Z-score: 3064.4 bits: 577.5 E(): 5.5e-162
Smith-Waterman score: 3016; 98.848% identity (99.539% similar) in 434 aa overlap (68-501:355-788)
40 50 60 70 80 90
FLJ002 QCLSPGEWGSGSRCHLSWPLAIAHHTLLCPQEPGFAEVLPNLTVQEMDWLVLGELQMALE
::::::::::::::::::::::::::::::
gi|114 RSGGLTQVPLRLQILHQGQLLRELQANVSAQEPGFAEVLPNLTVQEMDWLVLGELQMALE
330 340 350 360 370 380
100 110 120 130 140 150
FLJ002 WAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVV
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 WAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVV
390 400 410 420 430 440
160 170 180 190 200 210
FLJ002 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLN
450 460 470 480 490 500
220 230 240 250 260 270
FLJ002 VGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 VGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
510 520 530 540 550 560
280 290 300 310 320 330
FLJ002 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
570 580 590 600 610 620
340 350 360 370 380 390
FLJ002 GMASLMITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPG
:::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 GMASLLITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPG
630 640 650 660 670 680
400 410 420 430 440 450
FLJ002 LPALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 LPALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCP
690 700 710 720 730 740
460 470 480 490 500
FLJ002 PPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGGHWRGAL
::::::::::::::::::::::::::::::::::::::: .. :
gi|114 PPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGCYFDGDRSWRAAGTRWHPVVP
750 760 770 780 790 800
gi|114 PFGLIKCAVCTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQCPVGSGAHPQLGDPM
810 820 830 840 850 860
>>gi|114590802|ref|XP_516917.2| PREDICTED: chordin [Pan (1220 aa)
initn: 3087 init1: 2982 opt: 2982 Z-score: 3028.5 bits: 571.2 E(): 5.5e-160
Smith-Waterman score: 2982; 98.157% identity (99.078% similar) in 434 aa overlap (68-501:355-788)
40 50 60 70 80 90
FLJ002 QCLSPGEWGSGSRCHLSWPLAIAHHTLLCPQEPGFAEVLPNLTVQEMDWLVLGELQMALE
::::::::::::::::::::::::::::::
gi|114 RSGGLTQVPLRLQILHQGQLLRELQANVSAQEPGFAEVLPNLTVQEMDWLVLGELQMALE
330 340 350 360 370 380
100 110 120 130 140 150
FLJ002 WAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVV
:::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 LAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVV
390 400 410 420 430 440
160 170 180 190 200 210
FLJ002 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLN
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLN
450 460 470 480 490 500
220 230 240 250 260 270
FLJ002 VGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 VGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
510 520 530 540 550 560
280 290 300 310 320 330
FLJ002 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
570 580 590 600 610 620
340 350 360 370 380 390
FLJ002 GMASLMITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPG
:::::.:::::::::::::::::::::::::::::::::::::::::::::.:::::: :
gi|114 GMASLLITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTAAAAPPVVRG
630 640 650 660 670 680
400 410 420 430 440 450
FLJ002 LPALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|114 LPALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCP
690 700 710 720 730 740
460 470 480 490 500
FLJ002 PPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGGHWRGAL
::::::::::::::::::::::::::::::::::::::: .. :
gi|114 PPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGCYFDGDRSWRAAGTRWHPVVP
750 760 770 780 790 800
gi|114 PFGLIKCAVCTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQCPVGSGAHPQLGDPM
810 820 830 840 850 860
>>gi|119598646|gb|EAW78240.1| chordin, isoform CRA_b [Ho (420 aa)
initn: 2967 init1: 2967 opt: 2967 Z-score: 3019.3 bits: 567.9 E(): 1.8e-159
Smith-Waterman score: 2967; 100.000% identity (100.000% similar) in 420 aa overlap (84-503:1-420)
60 70 80 90 100 110
FLJ002 SWPLAIAHHTLLCPQEPGFAEVLPNLTVQEMDWLVLGELQMALEWAGRPGLRISGHIAAR
::::::::::::::::::::::::::::::
gi|119 MDWLVLGELQMALEWAGRPGLRISGHIAAR
10 20 30
120 130 140 150 160 170
FLJ002 KSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVVGTSSEVVAMTLETKPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 KSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVVGTSSEVVAMTLETKPQ
40 50 60 70 80 90
180 190 200 210 220 230
FLJ002 RRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLNVGTKDFPDGELRGHVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 RRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLNVGTKDFPDGELRGHVA
100 110 120 130 140 150
240 250 260 270 280 290
FLJ002 ALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQG
160 170 180 190 200 210
300 310 320 330 340 350
FLJ002 TVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAKGMASLMITTKGSPRGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAKGMASLMITTKGSPRGE
220 230 240 250 260 270
360 370 380 390 400 410
FLJ002 LRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPGLPALAPAKPGGPGRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPGLPALAPAKPGGPGRPR
280 290 300 310 320 330
420 430 440 450 460 470
FLJ002 DPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 DPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCP
340 350 360 370 380 390
480 490 500
FLJ002 VCPEKQDVRDLPGLPRSRDPGEGGHWRGAL
::::::::::::::::::::::::::::::
gi|119 VCPEKQDVRDLPGLPRSRDPGEGGHWRGAL
400 410 420
>>gi|119598648|gb|EAW78242.1| chordin, isoform CRA_d [Ho (585 aa)
initn: 3034 init1: 2915 opt: 2915 Z-score: 2964.6 bits: 558.3 E(): 2e-156
Smith-Waterman score: 2915; 99.043% identity (99.522% similar) in 418 aa overlap (84-501:1-418)
60 70 80 90 100 110
FLJ002 SWPLAIAHHTLLCPQEPGFAEVLPNLTVQEMDWLVLGELQMALEWAGRPGLRISGHIAAR
::::::::::::::::::::::::::::::
gi|119 MDWLVLGELQMALEWAGRPGLRISGHIAAR
10 20 30
120 130 140 150 160 170
FLJ002 KSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVVGTSSEVVAMTLETKPQ
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 KSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVVGTSSEVVAMTLETKPQ
40 50 60 70 80 90
180 190 200 210 220 230
FLJ002 RRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLNVGTKDFPDGELRGHVA
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 RRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLNVGTKDFPDGELRGHVA
100 110 120 130 140 150
240 250 260 270 280 290
FLJ002 ALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQG
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 ALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCHLHYEVLLAGLGGSEQG
160 170 180 190 200 210
300 310 320 330 340 350
FLJ002 TVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAKGMASLMITTKGSPRGE
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 TVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAKGMASLMITTKGSPRGE
220 230 240 250 260 270
360 370 380 390 400 410
FLJ002 LRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPGLPALAPAKPGGPGRPR
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 LRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPGLPALAPAKPGGPGRPR
280 290 300 310 320 330
420 430 440 450 460 470
FLJ002 DPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|119 DPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCPPPSCPHPVQAPDQCCP
340 350 360 370 380 390
480 490 500
FLJ002 VCPEKQDVRDLPGLPRSRDPGEGGHWRGAL
::::::::::::::::::::::: .. :
gi|119 VCPEKQDVRDLPGLPRSRDPGEGCYFDGDRSWRAAGTRWHPVVPPFGLIKCAVCTCKGGT
400 410 420 430 440 450
>>gi|109042395|ref|XP_001097729.1| PREDICTED: chordin [M (955 aa)
initn: 2981 init1: 2890 opt: 2890 Z-score: 2936.4 bits: 553.8 E(): 7.4e-155
Smith-Waterman score: 2890; 95.161% identity (97.235% similar) in 434 aa overlap (68-501:355-788)
40 50 60 70 80 90
FLJ002 QCLSPGEWGSGSRCHLSWPLAIAHHTLLCPQEPGFAEVLPNLTVQEMDWLVLGELQMALE
::::::::::::::::::::::::::::::
gi|109 RSGGLTQVPLRLQILHQGQLLRELQANVSAQEPGFAEVLPNLTVQEMDWLVLGELQMALE
330 340 350 360 370 380
100 110 120 130 140 150
FLJ002 WAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVV
:::::::::::::.:::::::::::::::.:::::::::::::::::::::::::::::
gi|109 RAGRPGLRISGHIATRKSCDVLQSVLCGADVLIPVQTGAAGSASLTLLGNGSLIYQVQVV
390 400 410 420 430 440
160 170 180 190 200 210
FLJ002 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLN
::::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::
gi|109 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHMAVGICPGLGARGAHMLLQNELFLN
450 460 470 480 490 500
220 230 240 250 260 270
FLJ002 VGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
:::::::::::::::::::: ::::::: :::::::::::::::::::::::::::::::
gi|109 VGTKDFPDGELRGHVAALPYSGHSARHDRLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
510 520 530 540 550 560
280 290 300 310 320 330
FLJ002 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
:::::::::::::::::::::::::::::::::::::::: :::::::::::::::::::
gi|109 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGPEAQGVVKDLEPELLRHLAK
570 580 590 600 610 620
340 350 360 370 380 390
FLJ002 GMASLMITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPG
:::::.:.:::::::::::::::::::::::::: :::.:::: ::::::.::::::::
gi|109 GMASLLIATKGSPRGELRGQVHIANQCEVGGLRLGAAGVEGVREPGAPDTAAAAPPVVPG
630 640 650 660 670 680
400 410 420 430 440 450
FLJ002 LPALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCP
::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
gi|109 PLALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICDPVVCP
690 700 710 720 730 740
460 470 480 490 500
FLJ002 PPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGGHWRGAL
:::::::::.::::::::::::::::::::::::::::: .. :
gi|109 PPSCPHPVQTPDQCCPVCPEKQDVRDLPGLPRSRDPGEGCYFDGDRSWRAAGTRWHPVVP
750 760 770 780 790 800
gi|109 PFGLIKCAVCTCKGGTGEVHCEKVQCPRLACAQPVRVNPTDCCKQCPVGLGAHPQLGDPM
810 820 830 840 850 860
>>gi|74003395|ref|XP_849776.1| PREDICTED: similar to Cho (959 aa)
initn: 2770 init1: 2029 opt: 2764 Z-score: 2808.3 bits: 530.1 E(): 1e-147
Smith-Waterman score: 2764; 89.977% identity (94.989% similar) in 439 aa overlap (68-501:355-793)
40 50 60 70 80 90
FLJ002 QCLSPGEWGSGSRCHLSWPLAIAHHTLLCPQEPGFAEVLPNLTVQEMDWLVLGELQMALE
:::::::::::::.::::::::::::::::
gi|740 RSGGPTQVPLRLQILHQGQLLRELQANASVQEPGFAEVLPNLTAQEMDWLVLGELQMALE
330 340 350 360 370 380
100 110 120 130 140 150
FLJ002 WAGRPGLRISGHIAARKSCDVLQSVLCGADALIPVQTGAAGSASLTLLGNGSLIYQVQVV
:: ::::::::::::.:::::::::::::::.:::::.:::::::::::::::::::::
gi|740 RAGGPGLRISGHIAARQSCDVLQSVLCGADALVPVQTGGAGSASLTLLGNGSLIYQVQVV
390 400 410 420 430 440
160 170 180 190 200 210
FLJ002 GTSSEVVAMTLETKPQRRDQRTVLCHMAGLQPGGHTAVGICPGLGARGAHMLLQNELFLN
::.:::::::::::::::.:::::::::::::::: :::.::::::::::::::::::::
gi|740 GTGSEVVAMTLETKPQRRNQRTVLCHMAGLQPGGHMAVGVCPGLGARGAHMLLQNELFLN
450 460 470 480 490 500
220 230 240 250 260 270
FLJ002 VGTKDFPDGELRGHVAALPYCGHSARHDTLPVPLAGALVLPPVKSQAAGHAWLSLDTHCH
:::::::::::::::::::: ::::::::::::::::::::::.::::::::::::::::
gi|740 VGTKDFPDGELRGHVAALPYSGHSARHDTLPVPLAGALVLPPVQSQAAGHAWLSLDTHCH
510 520 530 540 550 560
280 290 300 310 320 330
FLJ002 LHYEVLLAGLGGSEQGTVTAHLLGPPGTPGPRRLLKGFYGSEAQGVVKDLEPELLRHLAK
::::::::::::::::::::::::::: :::::::::::: ::::::::::::::::::.
gi|740 LHYEVLLAGLGGSEQGTVTAHLLGPPGMPGPRRLLKGFYGPEAQGVVKDLEPELLRHLAQ
570 580 590 600 610 620
340 350 360 370 380 390
FLJ002 GMASLMITTKGSPRGELRGQVHIANQCEVGGLRLEAAGAEGVRALGAPDTASAAPPVVPG
: :::.:::::::.:::::::::::::::::::: ::::::. . :.::.:.:: : ::.
gi|740 GTASLLITTKGSPQGELRGQVHIANQCEVGGLRLAAAGAEGAWTPGSPDAAAAALPGVPA
630 640 650 660 670 680
400 410 420 430 440 450
FLJ002 L-----PALAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQRRTVICD
. :: ::::::::::::::::::::::::::::::::::::::::::::.::::::
gi|740 VLGPDAPAPAPAKPGGPGRPRDPNTCFFEGQQRPHGARWAPNYDPLCSLCTCQKRTVICD
690 700 710 720 730 740
460 470 480 490 500
FLJ002 PVVCPPPSCPHPVQAPDQCCPVCPEKQDVRDLPGLPRSRDPGEGGHWRGAL
:::::::::: :::::::::::::::::::::::: :.:::::: .. :
gi|740 PVVCPPPSCPTPVQAPDQCCPVCPEKQDVRDLPGLSRTRDPGEGCYFDGDRSWRAAGTRW
750 760 770 780 790 800
gi|740 HPVVPPFGLIKCAVCTCKGGTGEVHCEKVHCPRLACAQPIRANPTDCCKQCPVGSGAHPQ
810 820 830 840 850 860
503 residues in 1 query sequences
2693465022 residues in 7827732 library sequences
Tcomplib [34.26] (2 proc)
start: Fri Feb 27 21:41:24 2009 done: Fri Feb 27 21:48:26 2009
Total Scan time: 944.120 Total Display time: 0.160
Function used was FASTA [version 34.26.5 April 26, 2007]