# /usr/local/bin/fasta34_t -T 4 -b50 -d10 -H -O./tmp/sj05061.fasta.huge -Q ../query/FLJ00211.ptfa ./tmplib.10216 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00211, 213 aa vs ./tmplib.10216 library 2210781 residues in 2457 sequences Expectation_n fit: rho(ln(x))= 4.3103+/-0.00326; mu= 12.0521+/- 0.220 mean_var=65.1320+/-14.828, 0's: 0 Z-trim: 3 B-trim: 0 in 0/40 Lambda= 0.158919 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(2457) KIAA1587 ( 991 res) fj08327 ( 991) 719 173.8 2.5e-44 KIAA1114 ( 1458 res) fj15925 (1458) 666 161.8 1.5e-40 KIAA1859 ( 761 res) bm01165 ( 761) 649 157.6 1.4e-39 KIAA0420 ( 756 res) fg02987 ( 756) 84 28.1 1.4 KIAA0439 ( 995 res) hj00462 ( 995) 85 28.4 1.4 KIAA1436 ( 924 res) hh15451 ( 924) 78 26.8 4.2 KIAA1684 ( 762 res) fh24594 ( 762) 77 26.5 4.3 KIAA0406 ( 1095 res) hg01335s1 (1095) 78 26.9 4.7 KIAA1100 ( 444 res) hk07907 ( 444) 73 25.3 5.6 KIAA1264 ( 753 res) hj01058 ( 753) 74 25.8 6.8 KIAA0036 ( 632 res) ha02085 ( 632) 73 25.5 7.1 KIAA1401 ( 853 res) hk09639 ( 853) 74 25.8 7.4 KIAA1909 ( 1287 res) ff10210 (1287) 75 26.3 8.4 KIAA1072 ( 759 res) hj06360 ( 759) 72 25.3 9.4 KIAA0581 ( 1218 res) pf10976 (1218) 74 26.0 9.5 KIAA1882 ( 1176 res) aj00515 (1176) 73 25.8 11 KIAA1999 ( 1275 res) bf00346(revised) (1275) 73 25.8 11 KIAA1078 ( 1365 res) fg04938 (1365) 73 25.8 12 KIAA1183 ( 345 res) hg01641a ( 345) 67 23.8 12 KIAA1670 ( 598 res) hh04251 ( 598) 69 24.5 13 KIAA0659 ( 1049 res) fh22726 (1049) 70 25.0 16 KIAA1231 ( 1061 res) fh08195s1 (1061) 70 25.0 16 KIAA0196 ( 1164 res) ha02952 (1164) 70 25.1 17 FLJ00410 ( 305 res) sj09019 ( 305) 64 23.1 18 FLJ00335 ( 157 res) sj05150 ( 157) 61 22.1 18 KIAA0344 ( 2066 res) hg01568 (2066) 72 25.8 19 KIAA0095 ( 832 res) ha01471 ( 832) 68 24.5 19 KIAA1304 ( 1051 res) fh04032 (1051) 69 24.8 19 KIAA0846 ( 691 res) hk05386 ( 691) 67 24.1 20 KIAA0679 ( 917 res) hk02739s1 ( 917) 68 24.5 20 KIAA1760 ( 2219 res) af00030 (2219) 71 25.6 23 KIAA1118 ( 1165 res) hk07196(revised) (1165) 68 24.6 24 FLJ00124 ( 118 res) sh00874 ( 118) 58 21.3 24 KIAA1134 ( 611 res) hj00883 ( 611) 65 23.6 25 KIAA1898 ( 1013 res) fk06427 (1013) 67 24.3 25 KIAA0332 ( 1028 res) hg00939 (1028) 67 24.3 26 KIAA1846 ( 354 res) fg06344s1 ( 354) 62 22.7 27 KIAA0269 ( 567 res) ha06751 ( 567) 64 23.4 27 KIAA1850 ( 1236 res) pf00747(revised) (1236) 67 24.4 29 KIAA1903 ( 1014 res) hk10325 (1014) 66 24.1 30 KIAA0262 ( 811 res) ha07073s1 ( 811) 65 23.8 30 KIAA0806 ( 1073 res) hk04165(revised) (1073) 66 24.1 31 KIAA0001 ( 347 res) ha00008 ( 347) 61 22.4 32 KIAA0354 ( 730 res) hg01842 ( 730) 64 23.5 33 KIAA0879 ( 461 res) hk07371 ( 461) 62 22.8 33 KIAA1005 ( 1055 res) hk10066 (1055) 65 23.9 36 KIAA0671 ( 537 res) hk02368 ( 537) 62 22.9 36 KIAA0825 ( 553 res) hh03427 ( 553) 62 22.9 37 KIAA2035 ( 1135 res) ff09201 (1135) 65 23.9 38 KIAA1275 ( 1140 res) hk10413 (1140) 65 23.9 38 >>KIAA1587 ( 991 res) fj08327 (991 aa) initn: 992 init1: 466 opt: 719 Z-score: 889.1 bits: 173.8 E(): 2.5e-44 Smith-Waterman score: 719; 47.805% identity (80.000% similar) in 205 aa overlap (1-205:525-728) 10 20 30 FLJ002 LELKVSELVQFLLIKDQKKIPIKRADILKH .: .:.::.::::.:::.: ::..... .. KIAA15 VLRDCESPNSISIMGLNTSRVAITLKPQDPMEQNVAELLQFLLVKDQSKYPIRESEMREY 500 510 520 530 540 550 40 50 60 70 80 90 FLJ002 VIGDYKDIFPDLFKRAAERLQYVFGYKLVELEPKSNTYILINTLEPVEEDAEMRGDQGTP .. .:.. ::....::: .:. .: ..: ::.:...::::.: : :: .. .. .: : KIAA15 IVKEYRNQFPEILRRAAAHLECIFRFELRELDPEAHTYILLNKLGPVPFEGLEESPNG-P 560 570 580 590 600 610 100 110 120 130 140 150 FLJ002 TTGLLMIVLGLIFMKGNTIKETEAWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYLE ::::..:: ::..:: ::.: :..: :.:: .. :::.::.:.. .:: ::::. KIAA15 KMGLLMMILGQIFLNGNQAKEAEIWEMLWRMGVQRERRLSIFGNPKRLLSVEFVWQRYLD 620 630 640 650 660 670 160 170 180 190 200 210 FLJ002 YRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPAQYCEALADEGEQGQ :: . ::.::: ::::..:::.:::.:::.::..:.:: ::: .: ::: .. KIAA15 YRPVTDCKPVEYEFFWGPRSHLETTKMKILKFMAKIYNKDPMDWPEKYNEALEEDAARAF 680 690 700 710 720 730 FLJ002 TSA KIAA15 AEGWQALPHFRRPFFEEAAAEVPSPDSEVSSYSSKYAPHSWPESRLESKARKLVQLFLLM 740 750 760 770 780 790 >>KIAA1114 ( 1458 res) fj15925 (1458 aa) initn: 662 init1: 457 opt: 666 Z-score: 821.4 bits: 161.8 E(): 1.5e-40 Smith-Waterman score: 666; 48.058% identity (77.184% similar) in 206 aa overlap (1-205:471-673) 10 20 30 FLJ002 LELKVSELVQFLLIKDQKKIPIKRADILKH :. ....::..::.::: ::::::.:.:. KIAA11 KHLNGDERSGSNYRRIPWGRRPAPPRDVAILQERANKLVKYLLVKDQTKIPIKRSDMLRD 450 460 470 480 490 500 40 50 60 70 80 FLJ002 VIGDYKDIFPDLFKRAAERLQYVFGYKLVELEPKSNTYILINTLEPVEEDAEMRGD-QGT :: .: . ::....::. :. .: .: :.. .:. ::::.: : .: . : . : KIAA11 VIQEYDEYFPEIIERASYTLEKMFRVNLKEIDKQSSLYILISTQES---SAGILGTTKDT 510 520 530 540 550 90 100 110 120 130 140 FLJ002 PTTGLLMIVLGLIFMKGNTIKETEAWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYL : ::::..:..:::.:: .:. :. ::.::. : .: .::. .::::..::.:.:: KIAA11 PKLGLLMVILSVIFMNGNKASEAVIWEVLRKLGLRPGVRHSLFGEVRKLITDEFVKQKYL 560 570 580 590 600 610 150 160 170 180 190 200 FLJ002 EYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPAQYCEALADEGEQG ::.:.:.. : .::: :: :. ::::::::::. .:...::::: .:: ::. : KIAA11 EYKRVPNSRPPEYEFFWGLRSYHETSKMKVLKFACRVQKKDPKDWAVQYREAVEMEVQAA 620 630 640 650 660 670 210 FLJ002 QTSA KIAA11 AVAVAEAEARAEARAQMGIGEEAVAGPWNWDDMDIDCLTREELGDDAQAWSRFSFEIEAR 680 690 700 710 720 730 >>KIAA1859 ( 761 res) bm01165 (761 aa) initn: 643 init1: 446 opt: 649 Z-score: 803.8 bits: 157.6 E(): 1.4e-39 Smith-Waterman score: 649; 45.854% identity (77.561% similar) in 205 aa overlap (1-204:433-634) 10 20 30 FLJ002 LELKVSELVQFLLIKDQKKIPIKRADILKH :. ....::..:.::: :::::::::.:: KIAA18 AQLAPRPPMAPRSQIPSRHVLCLPPRNVTLLQERANKLVKYLMIKDYKKIPIKRADMLKD 410 420 430 440 450 460 40 50 60 70 80 FLJ002 VIGDYKDIFPDLFKRAAERLQYVFGYKLVELEPKSNTYILINTLEPVEEDAEMRGD-QGT :: .: . ::....::. :. :: .: :.. . . :::. : . .:.. : . : KIAA18 VIREYDEHFPEIIERATYTLEKKFGIHLKEIDKEEHLYILVCTRDS---SARLLGKTKDT 470 480 490 500 510 90 100 110 120 130 140 FLJ002 PTTGLLMIVLGLIFMKGNTIKETEAWDFLRRLGVYPTKKHLIFGDPKKLITEDFVRQRYL : .::...::.:::.:: .:. :. ::..:. : .: ..:: .::::.:::.:.:: KIAA18 PRLSLLLVILGVIFMNGNRASEAVLWEALRKMGLRPGVRHPFLGDLRKLITDDFVKQKYL 520 530 540 550 560 570 150 160 170 180 190 200 FLJ002 EYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPAQYCEALADEGEQG ::..::...: .::: :: :. :::::.::.:.:. .:.::..: :.. ::. : KIAA18 EYKKIPNSNPPEYEFLWGLRARHETSKMRVLRFIAQNQNRDPREWKAHFLEAVDDAFKTM 580 590 600 610 620 630 210 FLJ002 QTSA KIAA18 DVDMAEEHARAQMRAQMNIGDEALIGRWSWDDIQVELLTWDEDGDFGDAWARIPFAFWAR 640 650 660 670 680 690 >>KIAA0420 ( 756 res) fg02987 (756 aa) initn: 55 init1: 55 opt: 84 Z-score: 103.8 bits: 28.1 E(): 1.4 Smith-Waterman score: 84; 31.034% identity (55.172% similar) in 58 aa overlap (159-213:668-725) 130 140 150 160 170 180 FLJ002 HLIFGDPKKLITEDFVRQRYLEYRRIPHTDPVDYEFQW---GPRTNLETSKMKVLKFVAK : : .:: .: ... : : .. KIAA04 WVLGRDYSRVEAPLVCREGESIQGSHVTRWPGVYLLQWQMHSPPSSVACSLPGVDDVLTA 640 650 660 670 680 690 190 200 210 FLJ002 VHNQDPKDWPAQYCEALADEGEQGQTSA .:. :: :::.::.: .:. :. KIAA04 LHSPGPKCKLLYYCEVLASEDFRGSMSSLESCTSGFSQLSAATSSSSSGQSHSSSLVSR 700 710 720 730 740 750 >>KIAA0439 ( 995 res) hj00462 (995 aa) initn: 55 init1: 55 opt: 85 Z-score: 103.5 bits: 28.4 E(): 1.4 Smith-Waterman score: 88; 24.528% identity (54.717% similar) in 106 aa overlap (101-193:98-203) 80 90 100 110 120 FLJ002 INTLEPVEEDAEMRGDQGTPTTGLLMIVLGLIFMKGNTIKET--EAWDFLRRLGVYPTKK : ... .:::.: :. . : :... KIAA04 PLPTSDELFLPGICDPYVKLSLYVADENRELALVQTKTIKKTLNPKWNEEFYFRVNPSNH 70 80 90 100 110 120 130 140 150 160 170 FLJ002 HLIFG--DPKKLITEDFVRQRYLEYRRIPHTDPV---DYEFQ---WGPRTNLETSK--MK .:.: : ..: .::. : . ..: ::. : :. ::.. : .. KIAA04 RLLFEVFDENRLTRDDFLGQVDVPLSHLPTEDPTMERPYTFKDFLLRPRSHKSRVKGFLR 130 140 150 160 170 180 180 190 200 210 FLJ002 V-LKFVAKVHNQDPKDWPAQYCEALADEGEQGQTSA . . .. : .:: .. KIAA04 LKMAYMPKNGGQDEENSDQRDDMEHGWEVVDSNDSASQHQEELPPPPLPPGWEEKVDNLG 190 200 210 220 230 240 >>KIAA1436 ( 924 res) hh15451 (924 aa) initn: 77 init1: 77 opt: 78 Z-score: 95.2 bits: 26.8 E(): 4.2 Smith-Waterman score: 78; 29.412% identity (70.588% similar) in 34 aa overlap (166-199:807-838) 140 150 160 170 180 190 FLJ002 KKLITEDFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPKDWP : ...: ...::.:. .::... .:. KIAA14 FAVHSFGLDKAPVLLSSLDRKGIVTTSRRDW--KSDLSLERVSVLEFLLQVHGSEDQDFG 780 790 800 810 820 830 200 210 FLJ002 AQYCEALADEGEQGQTSA :: KIAA14 NYYCSVTPWVKSPTGSWQKEAEIHSKPVFITVKMDVLNAFKYPLLIGVGLSTVIGLLSCL 840 850 860 870 880 890 >>KIAA1684 ( 762 res) fh24594 (762 aa) initn: 54 init1: 54 opt: 77 Z-score: 95.0 bits: 26.5 E(): 4.3 Smith-Waterman score: 79; 23.684% identity (55.263% similar) in 190 aa overlap (1-168:272-456) 10 20 30 FLJ002 LELKVSELVQFLLIKDQKKIPIKRADILKH : ..::: .. :.. . . . :.. KIAA16 DLRGQLQQLRKLQLQNQESVRALLKRTEAELSMRVSEAARRQEDPLQRQRTLVEEERLRY 250 260 270 280 290 300 40 50 60 70 80 FLJ002 VIGDYKDIFPDL--FKRAAERLQY--VFGYKLV---ELEPKSNTYILINTLEPVEE-DAE ..: . : .: .....:..: ...:: ::: :. .: . : . : :. KIAA16 -LNDEELITQQLNDLEKSVEKIQRDVSHNHRLVPGPELEEKA--LVLKQLGETLTELKAH 310 320 330 340 350 90 100 110 120 FLJ002 MRGDQGTPTTGLLMIVLGLIFMK------GNTIKE----TEAWDFLRRL---GVYPTKKH . : :. . : . : .. :.: . .:. :.. .:: ::.: .. KIAA16 FPGLQSKMRVVLRVEVEAVKFLKEEPQRLDGLLKRCRGVTDTLAQIRRQVDEGVWPPPNN 360 370 380 390 400 410 130 140 150 160 170 180 FLJ002 LIFGDPKKLITE-DFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHN :. .:::. .: :: .. .... : . :.. . :: KIAA16 LLSQSPKKVTAETDF--NKSVDFEMPPPSPPLNLHELSGPAEGASLTPKGGNPTKGLDTP 420 430 440 450 460 470 190 200 210 FLJ002 QDPKDWPAQYCEALADEGEQGQTSA KIAA16 GKRSVDKAVSVEAAERDWEEKRAALTQYSAKDINRLLEETQAELLKAIPDLDCASKAHPG 480 490 500 510 520 530 >>KIAA0406 ( 1095 res) hg01335s1 (1095 aa) initn: 37 init1: 37 opt: 78 Z-score: 94.3 bits: 26.9 E(): 4.7 Smith-Waterman score: 78; 26.190% identity (58.730% similar) in 126 aa overlap (1-121:312-434) 10 20 30 FLJ002 LELKVSELVQFLLIKDQKKIPIKRADILKH ..:.. :::. ::.: .... . .:: KIAA04 EADWVKKTGDKLTILIKKIIECVSVHPHWKVRLELVELVEDLLLKCSQSLVECAGPLLKA 290 300 310 320 330 340 40 50 60 70 80 FLJ002 VIGDYKDIFPDLFKRAAERLQYVFGYKLVELEPKSNTYILINTLEPVEED----AEMRGD ..: .: :.. . . :.. :. . : . :. . :: ..:. . . . . : KIAA04 LVGLVNDESPEIQAQCNKVLRH-FADQKVVVGNKALADILSESLHSLATSLPRLMNSQDD 350 360 370 380 390 400 90 100 110 120 130 140 FLJ002 QGTPTT-GLLMIVLGLIFMKGNTIKETEAWDFLRRLGVYPTKKHLIFGDPKKLITEDFVR :: .: .::. : :. : : . .. : :.:: KIAA04 QGKFSTLSLLLGYLKLLGPKINFVLNSVA--HLQRLSKALIQVLELDVADIKIVEERRWN 410 420 430 440 450 150 160 170 180 190 200 FLJ002 QRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPAQYCEALADE KIAA04 SDDLNASPKTSATQPWNRIQRRYFRFFTDERIFMLLRQVCQLLGYYGNLYLLVDHFMELY 460 470 480 490 500 510 >>KIAA1100 ( 444 res) hk07907 (444 aa) initn: 50 init1: 50 opt: 73 Z-score: 93.0 bits: 25.3 E(): 5.6 Smith-Waterman score: 73; 22.989% identity (54.023% similar) in 87 aa overlap (74-159:227-305) 50 60 70 80 90 100 FLJ002 KRAAERLQYVFGYKLVELEPKSNTYILINTLEPVEEDAEMRGDQGTPTTGLLMIVLGLIF :. ...:...:::: :. : . . KIAA11 PPPPAPPPQPTHMAPLGQFVSLQTQHPRMPLQRLDNDVDLRGDQ--PSLGSFTYSTS--- 200 210 220 230 240 250 110 120 130 140 150 160 FLJ002 MKGNTIKETEAWDFLRRLGVYPTKKHLIFGDP-KKLITEDFVRQRYLEYRRIPHTDPVDY : ... . .: . : ...: :: : .... . . ::: . .: : KIAA11 APGPALSPSVPLHYLPH---DPLHQELSFGVPYSHMMPRRLSTQRYRLQQPLPPPPPPPP 260 270 280 290 300 170 180 190 200 210 FLJ002 EFQWGPRTNLETSKMKVLKFVAKVHNQDPKDWPAQYCEALADEGEQGQTSA KIAA11 PPPYYPSFLPYFLSMLPMSPTAMGPTISLDLDVDDVEMENYEALLNLAERLGDAKPRGLT 310 320 330 340 350 360 >>KIAA1264 ( 753 res) hj01058 (753 aa) initn: 98 init1: 74 opt: 74 Z-score: 91.4 bits: 25.8 E(): 6.8 Smith-Waterman score: 74; 42.308% identity (65.385% similar) in 26 aa overlap (150-175:252-277) 120 130 140 150 160 170 FLJ002 RLGVYPTKKHLIFGDPKKLITEDFVRQRYLEYRRIPHTDPVDYEFQWGPRTNLETSKMKV ::.: ..:.:: ::. : . :: KIAA12 LKSDFARFSADYHSHLDSLSKPSEYSDLKWEYQRASSSSPLDYSFQFTPSRTAGTSGCSK 230 240 250 260 270 280 180 190 200 210 FLJ002 LKFVAKVHNQDPKDWPAQYCEALADEGEQGQTSA KIAA12 ESLAYSESEWGPSLDDYDRRPKSSYLNQTSPQPTMRQRSRSGSGLQEPMMPFGASAFKTH 290 300 310 320 330 340 213 residues in 1 query sequences 2210781 residues in 2457 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 10:44:42 2009 done: Fri Feb 27 10:44:42 2009 Total Scan time: 0.370 Total Display time: 0.050 Function used was FASTA [version 34.26.5 April 26, 2007]